9G86
Structure of Response regulator PleD in complex with c-diGMP and pppGpp
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000160 | biological_process | phosphorelay signal transduction system |
| A | 0005515 | molecular_function | protein binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0043709 | biological_process | cell adhesion involved in single-species biofilm formation |
| A | 0052621 | molecular_function | diguanylate cyclase activity |
| A | 1902201 | biological_process | negative regulation of bacterial-type flagellum-dependent cell motility |
| B | 0000160 | biological_process | phosphorelay signal transduction system |
| B | 0005515 | molecular_function | protein binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0042802 | molecular_function | identical protein binding |
| B | 0043709 | biological_process | cell adhesion involved in single-species biofilm formation |
| B | 0052621 | molecular_function | diguanylate cyclase activity |
| B | 1902201 | biological_process | negative regulation of bacterial-type flagellum-dependent cell motility |
| C | 0000160 | biological_process | phosphorelay signal transduction system |
| C | 0005515 | molecular_function | protein binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0042802 | molecular_function | identical protein binding |
| C | 0043709 | biological_process | cell adhesion involved in single-species biofilm formation |
| C | 0052621 | molecular_function | diguanylate cyclase activity |
| C | 1902201 | biological_process | negative regulation of bacterial-type flagellum-dependent cell motility |
| D | 0000160 | biological_process | phosphorelay signal transduction system |
| D | 0005515 | molecular_function | protein binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0042802 | molecular_function | identical protein binding |
| D | 0043709 | biological_process | cell adhesion involved in single-species biofilm formation |
| D | 0052621 | molecular_function | diguanylate cyclase activity |
| D | 1902201 | biological_process | negative regulation of bacterial-type flagellum-dependent cell motility |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 464 |
| Details | Domain: {"description":"Response regulatory 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00169","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 456 |
| Details | Domain: {"description":"Response regulatory 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00169","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 405 |
| Details | Domain: {"description":"GGDEF","evidences":[{"source":"PROSITE-ProRule","id":"PRU00095","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 12 |
| Details | Site: {"description":"Allosteric product binding","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 4 |
| Details | Site: {"description":"Transition state stabilizer","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | Site: {"description":"Allosteric product phosphate group binding","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"4-aspartylphosphate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00169","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
