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9FL6

Human NUDT1 with medetomidine

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AAA0003723molecular_functionRNA binding
AAA0005515molecular_functionprotein binding
AAA0005634cellular_componentnucleus
AAA0005737cellular_componentcytoplasm
AAA0005739cellular_componentmitochondrion
AAA0005759cellular_componentmitochondrial matrix
AAA0005829cellular_componentcytosol
AAA0006152biological_processpurine nucleoside catabolic process
AAA0006281biological_processDNA repair
AAA0006979biological_processresponse to oxidative stress
AAA0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
AAA0008828molecular_functiondATP diphosphatase activity
AAA0016787molecular_functionhydrolase activity
AAA0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
AAA0030515molecular_functionsnoRNA binding
AAA0035539molecular_function8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
AAA0042262biological_processDNA protection
AAA0046872molecular_functionmetal ion binding
AAA0047693molecular_functionATP diphosphatase activity
AAA0106377molecular_function2-hydroxy-ATP hydrolase activity
AAA0106378molecular_function2-hydroxy-dATP hydrolase activity
AAA0106431molecular_functionN6-methyl-(d)ATP hydrolase activity
AAA0106433molecular_functionO6-methyl-dGTP hydrolase activity
AAA0140933molecular_function5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity
Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GkvqegEtiedGArRELqEEsG
ChainResidueDetails
AAAGLY37-GLY58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues129
DetailsDomain: {"description":"Nudix hydrolase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues21
DetailsMotif: {"description":"Nudix box","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30304478","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5OTM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"26999531","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5FSK","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"26999531","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28035004","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5FSI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GHI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GHM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q7ZWC3","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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