9FJK
Omicron BA.1 Spike protein with neutralizing NTD specific mAb K501SP6
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | SITE: Cleavage; by host furin => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32142651, ECO:0000269|PubMed:32362314, ECO:0000269|PubMed:32703818, ECO:0000269|PubMed:34159616 |
| Chain | Residue | Details |
| A | ALA685 | |
| B | ALA685 | |
| C | ALA685 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | SITE: Cleavage; by host TMPRSS2 or CTSL => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32703818, ECO:0000269|PubMed:34159616 |
| Chain | Residue | Details |
| A | ILE815 | |
| B | ILE815 | |
| C | ILE815 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 9 |
| Details | CARBOHYD: N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | ASN17 | |
| A | SER1158 | |
| A | VAL1173 | |
| B | ASN17 | |
| B | SER1158 | |
| B | VAL1173 | |
| C | ASN17 | |
| C | SER1158 | |
| C | VAL1173 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 15 |
| Details | CARBOHYD: N-linked (GlcNAc...) (hybrid) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32363391, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | ASN61 | |
| B | THR1074 | |
| C | ASN61 | |
| C | THR122 | |
| C | ILE717 | |
| C | GLN801 | |
| C | THR1074 | |
| A | THR122 | |
| A | ILE717 | |
| A | GLN801 | |
| A | THR1074 | |
| B | ASN61 | |
| B | THR122 | |
| B | ILE717 | |
| B | GLN801 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 9 |
| Details | CARBOHYD: N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32363391, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | THR74 | |
| A | GLU149 | |
| A | LEU1194 | |
| B | THR74 | |
| B | GLU149 | |
| B | LEU1194 | |
| C | THR74 | |
| C | GLU149 | |
| C | LEU1194 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 21 |
| Details | CARBOHYD: N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32363391, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | TYR165 | |
| B | ASN331 | |
| B | ARG343 | |
| B | GLU616 | |
| B | TYR657 | |
| B | HIS1098 | |
| C | TYR165 | |
| C | ILE282 | |
| C | ASN331 | |
| C | ARG343 | |
| C | GLU616 | |
| A | ILE282 | |
| C | TYR657 | |
| C | HIS1098 | |
| A | ASN331 | |
| A | ARG343 | |
| A | GLU616 | |
| A | TYR657 | |
| A | HIS1098 | |
| B | TYR165 | |
| B | ILE282 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 6 |
| Details | CARBOHYD: N-linked (GlcNAc...) (high mannose) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32363391, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | ARG234 | |
| A | ILE709 | |
| B | ARG234 | |
| B | ILE709 | |
| C | ARG234 | |
| C | ILE709 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 3 |
| Details | CARBOHYD: O-linked (GalNAc) threonine; by host => ECO:0000269|PubMed:32363391 |
| Chain | Residue | Details |
| A | ILE323 | |
| B | ILE323 | |
| C | ILE323 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 3 |
| Details | CARBOHYD: O-linked (HexNAc...) serine; by host => ECO:0000269|PubMed:32363391 |
| Chain | Residue | Details |
| A | ARG325 | |
| B | ARG325 | |
| C | ARG325 |
| site_id | SWS_FT_FI10 |
| Number of Residues | 3 |
| Details | CARBOHYD: N-linked (GlcNAc...) (hybrid) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | ASN603 | |
| B | ASN603 | |
| C | ASN603 |
| site_id | SWS_FT_FI11 |
| Number of Residues | 6 |
| Details | CARBOHYD: O-linked (GlcNAc...) threonine; by host GALNT1 => ECO:0000269|PubMed:34732583 |
| Chain | Residue | Details |
| A | LYS676 | |
| A | HIS678 | |
| B | LYS676 | |
| B | HIS678 | |
| C | LYS676 | |
| C | HIS678 |
| site_id | SWS_FT_FI12 |
| Number of Residues | 3 |
| Details | CARBOHYD: N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942 |
| Chain | Residue | Details |
| A | VAL1134 | |
| B | VAL1134 | |
| C | VAL1134 |
