Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

9F5X

Structure of the Chlamydomonas reinhardtii respiratory supercomplex I1 III2 IV2

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
1A	0005743	cellular_component	mitochondrial inner membrane
1A	0008121	molecular_function	quinol-cytochrome-c reductase activity
1A	0009055	molecular_function	electron transfer activity
1A	0016020	cellular_component	membrane
1A	0016491	molecular_function	oxidoreductase activity
1A	0022904	biological_process	respiratory electron transport chain
1A	0045275	cellular_component	respiratory chain complex III
1A	1902600	biological_process	proton transmembrane transport
1B	0005743	cellular_component	mitochondrial inner membrane
1B	0008121	molecular_function	quinol-cytochrome-c reductase activity
1B	0009055	molecular_function	electron transfer activity
1B	0016020	cellular_component	membrane
1B	0016491	molecular_function	oxidoreductase activity
1B	0022904	biological_process	respiratory electron transport chain
1B	0045275	cellular_component	respiratory chain complex III
1B	1902600	biological_process	proton transmembrane transport
1C	0005743	cellular_component	mitochondrial inner membrane
1C	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1C	0008121	molecular_function	quinol-cytochrome-c reductase activity
1C	0016020	cellular_component	membrane
1C	0016491	molecular_function	oxidoreductase activity
1C	0051537	molecular_function	2 iron, 2 sulfur cluster binding
1C	1902600	biological_process	proton transmembrane transport
1D	0005743	cellular_component	mitochondrial inner membrane
1D	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1D	0008121	molecular_function	quinol-cytochrome-c reductase activity
1D	0016020	cellular_component	membrane
1D	0016491	molecular_function	oxidoreductase activity
1D	0051537	molecular_function	2 iron, 2 sulfur cluster binding
1D	1902600	biological_process	proton transmembrane transport
1E	0005743	cellular_component	mitochondrial inner membrane
1E	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1E	0009055	molecular_function	electron transfer activity
1E	0016020	cellular_component	membrane
1E	0020037	molecular_function	heme binding
1E	0045275	cellular_component	respiratory chain complex III
1F	0005743	cellular_component	mitochondrial inner membrane
1F	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1F	0009055	molecular_function	electron transfer activity
1F	0016020	cellular_component	membrane
1F	0020037	molecular_function	heme binding
1F	0045275	cellular_component	respiratory chain complex III
1G	0005743	cellular_component	mitochondrial inner membrane
1G	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1G	0009060	biological_process	aerobic respiration
1G	0016020	cellular_component	membrane
1G	0045275	cellular_component	respiratory chain complex III
1H	0005743	cellular_component	mitochondrial inner membrane
1H	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1H	0009060	biological_process	aerobic respiration
1H	0016020	cellular_component	membrane
1H	0045275	cellular_component	respiratory chain complex III
1I	0005743	cellular_component	mitochondrial inner membrane
1I	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1I	0016020	cellular_component	membrane
1J	0005743	cellular_component	mitochondrial inner membrane
1J	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1J	0016020	cellular_component	membrane
1K	0005743	cellular_component	mitochondrial inner membrane
1K	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1K	0045275	cellular_component	respiratory chain complex III
1K	0098803	cellular_component	respiratory chain complex
1L	0005743	cellular_component	mitochondrial inner membrane
1L	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1L	0045275	cellular_component	respiratory chain complex III
1L	0098803	cellular_component	respiratory chain complex
1M	0004222	molecular_function	metalloendopeptidase activity
1M	0005739	cellular_component	mitochondrion
1M	0005759	cellular_component	mitochondrial matrix
1M	0006508	biological_process	proteolysis
1M	0009003	molecular_function	signal peptidase activity
1M	0017087	cellular_component	mitochondrial processing peptidase complex
1M	0046872	molecular_function	metal ion binding
1N	0004222	molecular_function	metalloendopeptidase activity
1N	0005739	cellular_component	mitochondrion
1N	0005759	cellular_component	mitochondrial matrix
1N	0006508	biological_process	proteolysis
1N	0009003	molecular_function	signal peptidase activity
1N	0017087	cellular_component	mitochondrial processing peptidase complex
1N	0046872	molecular_function	metal ion binding
1Q	0005739	cellular_component	mitochondrion
1Q	0016020	cellular_component	membrane
1Q	0017087	cellular_component	mitochondrial processing peptidase complex
1Q	0046872	molecular_function	metal ion binding
1R	0005743	cellular_component	mitochondrial inner membrane
1R	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1R	0016020	cellular_component	membrane
1R	0045275	cellular_component	respiratory chain complex III
1S	0005739	cellular_component	mitochondrion
1S	0016020	cellular_component	membrane
1S	0017087	cellular_component	mitochondrial processing peptidase complex
1S	0046872	molecular_function	metal ion binding
1T	0005743	cellular_component	mitochondrial inner membrane
1T	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
1T	0016020	cellular_component	membrane
1T	0045275	cellular_component	respiratory chain complex III
2A	0004129	molecular_function	cytochrome-c oxidase activity
2A	0005743	cellular_component	mitochondrial inner membrane
2A	0006119	biological_process	oxidative phosphorylation
2A	0009060	biological_process	aerobic respiration
2A	0016020	cellular_component	membrane
2A	0020037	molecular_function	heme binding
2A	0045277	cellular_component	respiratory chain complex IV
2A	1902600	biological_process	proton transmembrane transport
2B	0004129	molecular_function	cytochrome-c oxidase activity
2B	0005507	molecular_function	copper ion binding
2B	0016020	cellular_component	membrane
2B	0022900	biological_process	electron transport chain
2B	0031966	cellular_component	mitochondrial membrane
2B	1902600	biological_process	proton transmembrane transport
2C	0004129	molecular_function	cytochrome-c oxidase activity
2C	0005507	molecular_function	copper ion binding
2C	0016020	cellular_component	membrane
2C	1902600	biological_process	proton transmembrane transport
2D	0004129	molecular_function	cytochrome-c oxidase activity
2D	0005739	cellular_component	mitochondrion
2D	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
2D	0009055	molecular_function	electron transfer activity
2D	0016020	cellular_component	membrane
2D	0019646	biological_process	aerobic electron transport chain
2D	0022904	biological_process	respiratory electron transport chain
2D	1902600	biological_process	proton transmembrane transport
2E	0005740	cellular_component	mitochondrial envelope
2E	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
2E	0045277	cellular_component	respiratory chain complex IV
2H	0004129	molecular_function	cytochrome-c oxidase activity
2H	0005739	cellular_component	mitochondrion
2H	0016020	cellular_component	membrane
2H	0045277	cellular_component	respiratory chain complex IV
2H	1902600	biological_process	proton transmembrane transport
3A	0004129	molecular_function	cytochrome-c oxidase activity
3A	0005743	cellular_component	mitochondrial inner membrane
3A	0006119	biological_process	oxidative phosphorylation
3A	0009060	biological_process	aerobic respiration
3A	0016020	cellular_component	membrane
3A	0020037	molecular_function	heme binding
3A	0045277	cellular_component	respiratory chain complex IV
3A	1902600	biological_process	proton transmembrane transport
3B	0004129	molecular_function	cytochrome-c oxidase activity
3B	0005507	molecular_function	copper ion binding
3B	0016020	cellular_component	membrane
3B	0022900	biological_process	electron transport chain
3B	0031966	cellular_component	mitochondrial membrane
3B	1902600	biological_process	proton transmembrane transport
3C	0004129	molecular_function	cytochrome-c oxidase activity
3C	0005507	molecular_function	copper ion binding
3C	0016020	cellular_component	membrane
3C	1902600	biological_process	proton transmembrane transport
3D	0004129	molecular_function	cytochrome-c oxidase activity
3D	0005739	cellular_component	mitochondrion
3D	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
3D	0009055	molecular_function	electron transfer activity
3D	0016020	cellular_component	membrane
3D	0019646	biological_process	aerobic electron transport chain
3D	0022904	biological_process	respiratory electron transport chain
3D	1902600	biological_process	proton transmembrane transport
3E	0005740	cellular_component	mitochondrial envelope
3E	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
3E	0045277	cellular_component	respiratory chain complex IV
3H	0004129	molecular_function	cytochrome-c oxidase activity
3H	0005739	cellular_component	mitochondrion
3H	0016020	cellular_component	membrane
3H	0045277	cellular_component	respiratory chain complex IV
3H	1902600	biological_process	proton transmembrane transport
A	0016491	molecular_function	oxidoreductase activity
B	0005739	cellular_component	mitochondrion
B	0005743	cellular_component	mitochondrial inner membrane
B	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
B	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
B	0010181	molecular_function	FMN binding
B	0045271	cellular_component	respiratory chain complex I
B	0051287	molecular_function	NAD binding
B	0051539	molecular_function	4 iron, 4 sulfur cluster binding
B	1902600	biological_process	proton transmembrane transport
C	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
C	0016020	cellular_component	membrane
C	0016491	molecular_function	oxidoreductase activity
C	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
C	0042773	biological_process	ATP synthesis coupled electron transport
C	0051536	molecular_function	iron-sulfur cluster binding
C	1902600	biological_process	proton transmembrane transport
D	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
D	0045271	cellular_component	respiratory chain complex I
D	1902600	biological_process	proton transmembrane transport
e	0005743	cellular_component	mitochondrial inner membrane
e	0008320	molecular_function	transmembrane protein transporter activity
e	0030943	molecular_function	mitochondrion targeting sequence binding
e	0042721	cellular_component	TIM22 mitochondrial import inner membrane insertion complex
e	0045039	biological_process	protein insertion into mitochondrial inner membrane
e	0071806	biological_process	protein transmembrane transport
E	0005743	cellular_component	mitochondrial inner membrane
E	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
E	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
E	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
E	0045271	cellular_component	respiratory chain complex I
E	0048038	molecular_function	quinone binding
E	0051287	molecular_function	NAD binding
E	1902600	biological_process	proton transmembrane transport
F	0005739	cellular_component	mitochondrion
F	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
F	0009060	biological_process	aerobic respiration
F	0015990	biological_process	electron transport coupled proton transport
F	0032981	biological_process	mitochondrial respiratory chain complex I assembly
F	0045271	cellular_component	respiratory chain complex I
F	0048038	molecular_function	quinone binding
F	0051536	molecular_function	iron-sulfur cluster binding
F	0051539	molecular_function	4 iron, 4 sulfur cluster binding
g	0005739	cellular_component	mitochondrion
g	0005743	cellular_component	mitochondrial inner membrane
g	0022900	biological_process	electron transport chain
g	0045271	cellular_component	respiratory chain complex I
G	0003954	molecular_function	NADH dehydrogenase activity
G	0005739	cellular_component	mitochondrion
G	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
G	0016020	cellular_component	membrane
G	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
G	0032981	biological_process	mitochondrial respiratory chain complex I assembly
G	0051539	molecular_function	4 iron, 4 sulfur cluster binding
i	0005743	cellular_component	mitochondrial inner membrane
i	0005758	cellular_component	mitochondrial intermembrane space
i	0032981	biological_process	mitochondrial respiratory chain complex I assembly
I	0005743	cellular_component	mitochondrial inner membrane
I	0022904	biological_process	respiratory electron transport chain
j	0005739	cellular_component	mitochondrion
j	0005743	cellular_component	mitochondrial inner membrane
j	0005758	cellular_component	mitochondrial intermembrane space
J	0000035	molecular_function	acyl binding
J	0000036	molecular_function	acyl carrier activity
J	0005739	cellular_component	mitochondrion
J	0006633	biological_process	fatty acid biosynthetic process
J	0031177	molecular_function	phosphopantetheine binding
J	1902494	cellular_component	catalytic complex
k	0005743	cellular_component	mitochondrial inner membrane
k	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
K	0005743	cellular_component	mitochondrial inner membrane
K	0045271	cellular_component	respiratory chain complex I
L	0005743	cellular_component	mitochondrial inner membrane
L	0022900	biological_process	electron transport chain
m	0005739	cellular_component	mitochondrion
m	0005743	cellular_component	mitochondrial inner membrane
m	0016020	cellular_component	membrane
m	0045271	cellular_component	respiratory chain complex I
M	0005739	cellular_component	mitochondrion
M	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
M	0045271	cellular_component	respiratory chain complex I
n	0005739	cellular_component	mitochondrion
n	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
N	0005743	cellular_component	mitochondrial inner membrane
N	0016020	cellular_component	membrane
N	0045271	cellular_component	respiratory chain complex I
O	0005743	cellular_component	mitochondrial inner membrane
O	0045271	cellular_component	respiratory chain complex I
P	0006744	biological_process	ubiquinone biosynthetic process
P	0044877	molecular_function	protein-containing complex binding
Q	0005743	cellular_component	mitochondrial inner membrane
Q	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
Q	0016020	cellular_component	membrane
Q	1902600	biological_process	proton transmembrane transport
r	0000035	molecular_function	acyl binding
r	0000036	molecular_function	acyl carrier activity
r	0005739	cellular_component	mitochondrion
r	0006633	biological_process	fatty acid biosynthetic process
r	0031177	molecular_function	phosphopantetheine binding
r	1902494	cellular_component	catalytic complex
R	0005743	cellular_component	mitochondrial inner membrane
R	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
R	1902600	biological_process	proton transmembrane transport
s	0009853	biological_process	photorespiration
s	0031966	cellular_component	mitochondrial membrane
s	0045271	cellular_component	respiratory chain complex I
S	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
S	0016020	cellular_component	membrane
S	0030964	cellular_component	NADH dehydrogenase complex
S	1902600	biological_process	proton transmembrane transport
t	0009853	biological_process	photorespiration
t	0031966	cellular_component	mitochondrial membrane
t	0045271	cellular_component	respiratory chain complex I
T	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
T	0031966	cellular_component	mitochondrial membrane
T	0042773	biological_process	ATP synthesis coupled electron transport
T	1902600	biological_process	proton transmembrane transport
u	0009853	biological_process	photorespiration
u	0031966	cellular_component	mitochondrial membrane
u	0045271	cellular_component	respiratory chain complex I
U	0016020	cellular_component	membrane
U	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
U	0030964	cellular_component	NADH dehydrogenase complex
U	0042773	biological_process	ATP synthesis coupled electron transport
V	0005743	cellular_component	mitochondrial inner membrane
V	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
V	0042773	biological_process	ATP synthesis coupled electron transport
V	1902600	biological_process	proton transmembrane transport
W	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
W	0031966	cellular_component	mitochondrial membrane
W	1902600	biological_process	proton transmembrane transport

Functional Information from PROSITE/UniProt

site_id	PS00012
Number of Residues	16
Details	PHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLDSLDVVELVMAL

Chain	Residue	Details
J	ASP80-LEU95

site_id	PS00027
Number of Residues	24
Details	HOMEOBOX_1 'Homeobox' domain signature. LAmaIlLLdiMLKVWVgTnllsgM

Chain	Residue	Details
V	LEU444-MET467

site_id	PS00077
Number of Residues	55
Details	COX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WFFGHPeVyililpafgivsqvvsffsqkpvfgltgmicamgaisllgfivwa..HH

Chain	Residue	Details
3A	TRP231-HIS285

site_id	PS00078
Number of Residues	49
Details	COX2 CO II and nitrous oxide reductase dinuclear copper centers signature. VlHswavpalgvkmdavpgrlnqvwmsinregvfygq......CselCganHsfM

Chain	Residue	Details
3C	VAL83-MET131

site_id	PS00198
Number of Residues	12
Details	4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP

Chain	Residue	Details
G	CYS132-PRO143
G	CYS171-PRO182

site_id	PS00284
Number of Residues	11
Details	SERPIN Serpins signature. LFINSSFVLmM

Chain	Residue	Details
W	LEU34-MET44

site_id	PS00535
Number of Residues	12
Details	COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLlEyK

Chain	Residue	Details
E	LEU120-LYS131

site_id	PS00542
Number of Residues	22
Details	COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREtwDMFgvffsgHpdlRrIL

Chain	Residue	Details
D	GLU205-LEU226

site_id	PS00641
Number of Residues	18
Details	COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYhqrlsiaGnCRmC

Chain	Residue	Details
C	PRO80-CYS97

site_id	PS00642
Number of Residues	13
Details	COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ

Chain	Residue	Details
C	CYS147-GLN159

site_id	PS00643
Number of Residues	11
Details	COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCVrF

Chain	Residue	Details
C	ARG194-PHE204

site_id	PS00644
Number of Residues	16
Details	COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGAYICGEETALIES

Chain	Residue	Details
B	GLY221-SER236

site_id	PS00645
Number of Residues	12
Details	COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG

Chain	Residue	Details
B	GLU398-GLY409

site_id	PS00667
Number of Residues	16
Details	COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQpFwDGLKLGvKE

Chain	Residue	Details
Q	GLY44-GLU59

site_id	PS00668
Number of Residues	12
Details	COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLPEAE..LVa.G

Chain	Residue	Details
Q	PRO194-GLY205

site_id	PS00687
Number of Residues	8
Details	ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GELGGLSP

Chain	Residue	Details
p	GLY121-PRO128

site_id	PS01099
Number of Residues	19
Details	COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DglFTlgemeCMGaCvnAP

Chain	Residue	Details
A	ASP177-PRO195

site_id	PS01150
Number of Residues	17
Details	COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRVVPVDVYvPgCPP

Chain	Residue	Details
F	GLY120-PRO136

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	324
Details	Transmembrane: {"description":"Helical","evidences":[{"source":"UniProtKB","id":"P00163","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	8
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"UniProtKB","id":"P00163","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P00157","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI12
Number of Residues	1599
Details	Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI13
Number of Residues	14
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P00401","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI14
Number of Residues	6
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"UniProtKB","id":"P00401","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI15
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P00396","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI16
Number of Residues	4
Details	Cross-link: {"description":"1'-histidyl-3'-tyrosine (His-Tyr)","evidences":[{"source":"UniProtKB","id":"P00401","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)