9E0O
CryoEM structure of inducible Lysine decarboxylase from Hafnia alvei L-hydrazino-Lysine analog at 2.04 Angstrom resolution
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006520 | biological_process | amino acid metabolic process |
| A | 0006527 | biological_process | L-arginine catabolic process |
| A | 0006554 | biological_process | lysine catabolic process |
| A | 0008792 | molecular_function | arginine decarboxylase activity |
| A | 0008923 | molecular_function | lysine decarboxylase activity |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| A | 0042802 | molecular_function | identical protein binding |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006520 | biological_process | amino acid metabolic process |
| B | 0006527 | biological_process | L-arginine catabolic process |
| B | 0006554 | biological_process | lysine catabolic process |
| B | 0008792 | molecular_function | arginine decarboxylase activity |
| B | 0008923 | molecular_function | lysine decarboxylase activity |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0030170 | molecular_function | pyridoxal phosphate binding |
| B | 0042802 | molecular_function | identical protein binding |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006520 | biological_process | amino acid metabolic process |
| C | 0006527 | biological_process | L-arginine catabolic process |
| C | 0006554 | biological_process | lysine catabolic process |
| C | 0008792 | molecular_function | arginine decarboxylase activity |
| C | 0008923 | molecular_function | lysine decarboxylase activity |
| C | 0016829 | molecular_function | lyase activity |
| C | 0016831 | molecular_function | carboxy-lyase activity |
| C | 0030170 | molecular_function | pyridoxal phosphate binding |
| C | 0042802 | molecular_function | identical protein binding |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005829 | cellular_component | cytosol |
| D | 0006520 | biological_process | amino acid metabolic process |
| D | 0006527 | biological_process | L-arginine catabolic process |
| D | 0006554 | biological_process | lysine catabolic process |
| D | 0008792 | molecular_function | arginine decarboxylase activity |
| D | 0008923 | molecular_function | lysine decarboxylase activity |
| D | 0016829 | molecular_function | lyase activity |
| D | 0016831 | molecular_function | carboxy-lyase activity |
| D | 0030170 | molecular_function | pyridoxal phosphate binding |
| D | 0042802 | molecular_function | identical protein binding |
| E | 0003824 | molecular_function | catalytic activity |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005829 | cellular_component | cytosol |
| E | 0006520 | biological_process | amino acid metabolic process |
| E | 0006527 | biological_process | L-arginine catabolic process |
| E | 0006554 | biological_process | lysine catabolic process |
| E | 0008792 | molecular_function | arginine decarboxylase activity |
| E | 0008923 | molecular_function | lysine decarboxylase activity |
| E | 0016829 | molecular_function | lyase activity |
| E | 0016831 | molecular_function | carboxy-lyase activity |
| E | 0030170 | molecular_function | pyridoxal phosphate binding |
| E | 0042802 | molecular_function | identical protein binding |
| F | 0003824 | molecular_function | catalytic activity |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005829 | cellular_component | cytosol |
| F | 0006520 | biological_process | amino acid metabolic process |
| F | 0006527 | biological_process | L-arginine catabolic process |
| F | 0006554 | biological_process | lysine catabolic process |
| F | 0008792 | molecular_function | arginine decarboxylase activity |
| F | 0008923 | molecular_function | lysine decarboxylase activity |
| F | 0016829 | molecular_function | lyase activity |
| F | 0016831 | molecular_function | carboxy-lyase activity |
| F | 0030170 | molecular_function | pyridoxal phosphate binding |
| F | 0042802 | molecular_function | identical protein binding |
| G | 0003824 | molecular_function | catalytic activity |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0005829 | cellular_component | cytosol |
| G | 0006520 | biological_process | amino acid metabolic process |
| G | 0006527 | biological_process | L-arginine catabolic process |
| G | 0006554 | biological_process | lysine catabolic process |
| G | 0008792 | molecular_function | arginine decarboxylase activity |
| G | 0008923 | molecular_function | lysine decarboxylase activity |
| G | 0016829 | molecular_function | lyase activity |
| G | 0016831 | molecular_function | carboxy-lyase activity |
| G | 0030170 | molecular_function | pyridoxal phosphate binding |
| G | 0042802 | molecular_function | identical protein binding |
| H | 0003824 | molecular_function | catalytic activity |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005829 | cellular_component | cytosol |
| H | 0006520 | biological_process | amino acid metabolic process |
| H | 0006527 | biological_process | L-arginine catabolic process |
| H | 0006554 | biological_process | lysine catabolic process |
| H | 0008792 | molecular_function | arginine decarboxylase activity |
| H | 0008923 | molecular_function | lysine decarboxylase activity |
| H | 0016829 | molecular_function | lyase activity |
| H | 0016831 | molecular_function | carboxy-lyase activity |
| H | 0030170 | molecular_function | pyridoxal phosphate binding |
| H | 0042802 | molecular_function | identical protein binding |
| I | 0003824 | molecular_function | catalytic activity |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005829 | cellular_component | cytosol |
| I | 0006520 | biological_process | amino acid metabolic process |
| I | 0006527 | biological_process | L-arginine catabolic process |
| I | 0006554 | biological_process | lysine catabolic process |
| I | 0008792 | molecular_function | arginine decarboxylase activity |
| I | 0008923 | molecular_function | lysine decarboxylase activity |
| I | 0016829 | molecular_function | lyase activity |
| I | 0016831 | molecular_function | carboxy-lyase activity |
| I | 0030170 | molecular_function | pyridoxal phosphate binding |
| I | 0042802 | molecular_function | identical protein binding |
| J | 0003824 | molecular_function | catalytic activity |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0005829 | cellular_component | cytosol |
| J | 0006520 | biological_process | amino acid metabolic process |
| J | 0006527 | biological_process | L-arginine catabolic process |
| J | 0006554 | biological_process | lysine catabolic process |
| J | 0008792 | molecular_function | arginine decarboxylase activity |
| J | 0008923 | molecular_function | lysine decarboxylase activity |
| J | 0016829 | molecular_function | lyase activity |
| J | 0016831 | molecular_function | carboxy-lyase activity |
| J | 0030170 | molecular_function | pyridoxal phosphate binding |
| J | 0042802 | molecular_function | identical protein binding |
Functional Information from PROSITE/UniProt
| site_id | PS00703 |
| Number of Residues | 15 |
| Details | OKR_DC_1 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. TqStHKllAAfSQAS |
| Chain | Residue | Details |
| A | THR362-SER376 |






