9DO4
Structure of T4 RNA Ligase 1 bound to ATP and Mg
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003972 | molecular_function | RNA ligase (ATP) activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0016874 | molecular_function | ligase activity |
| B | 0042245 | biological_process | RNA repair |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0098004 | biological_process | virus tail fiber assembly |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Active site: {"description":"N6-AMP-lysine intermediate","evidences":[{"source":"HAMAP-Rule","id":"MF_04149","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"3882425","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04149","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28223499","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04149","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"16263720","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28223499","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Site: {"description":"Essential for RNA ligase activity","evidences":[{"source":"HAMAP-Rule","id":"MF_04149","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17068206","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
