9D4N

The cryo-EM structure of the yeast Dmc1 filament bound to ssDNA in the presence of ATP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000150	molecular_function	DNA strand exchange activity
A	0000166	molecular_function	nucleotide binding
A	0000709	biological_process	meiotic joint molecule formation
A	0000730	biological_process	DNA recombinase assembly
A	0000794	cellular_component	condensed nuclear chromosome
A	0003677	molecular_function	DNA binding
A	0003690	molecular_function	double-stranded DNA binding
A	0003697	molecular_function	single-stranded DNA binding
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005634	cellular_component	nucleus
A	0006259	biological_process	DNA metabolic process
A	0006281	biological_process	DNA repair
A	0006312	biological_process	mitotic recombination
A	0007130	biological_process	synaptonemal complex assembly
A	0007131	biological_process	reciprocal meiotic recombination
A	0008094	molecular_function	ATP-dependent activity, acting on DNA
A	0030435	biological_process	sporulation resulting in formation of a cellular spore
A	0042030	molecular_function	ATPase inhibitor activity
A	0042148	biological_process	DNA strand invasion
A	0051321	biological_process	meiotic cell cycle
A	0070192	biological_process	chromosome organization involved in meiotic cell cycle
A	0140664	molecular_function	ATP-dependent DNA damage sensor activity
B	0000150	molecular_function	DNA strand exchange activity
B	0000166	molecular_function	nucleotide binding
B	0000709	biological_process	meiotic joint molecule formation
B	0000730	biological_process	DNA recombinase assembly
B	0000794	cellular_component	condensed nuclear chromosome
B	0003677	molecular_function	DNA binding
B	0003690	molecular_function	double-stranded DNA binding
B	0003697	molecular_function	single-stranded DNA binding
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005634	cellular_component	nucleus
B	0006259	biological_process	DNA metabolic process
B	0006281	biological_process	DNA repair
B	0006312	biological_process	mitotic recombination
B	0007130	biological_process	synaptonemal complex assembly
B	0007131	biological_process	reciprocal meiotic recombination
B	0008094	molecular_function	ATP-dependent activity, acting on DNA
B	0030435	biological_process	sporulation resulting in formation of a cellular spore
B	0042030	molecular_function	ATPase inhibitor activity
B	0042148	biological_process	DNA strand invasion
B	0051321	biological_process	meiotic cell cycle
B	0070192	biological_process	chromosome organization involved in meiotic cell cycle
B	0140664	molecular_function	ATP-dependent DNA damage sensor activity
C	0000150	molecular_function	DNA strand exchange activity
C	0000166	molecular_function	nucleotide binding
C	0000709	biological_process	meiotic joint molecule formation
C	0000730	biological_process	DNA recombinase assembly
C	0000794	cellular_component	condensed nuclear chromosome
C	0003677	molecular_function	DNA binding
C	0003690	molecular_function	double-stranded DNA binding
C	0003697	molecular_function	single-stranded DNA binding
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005634	cellular_component	nucleus
C	0006259	biological_process	DNA metabolic process
C	0006281	biological_process	DNA repair
C	0006312	biological_process	mitotic recombination
C	0007130	biological_process	synaptonemal complex assembly
C	0007131	biological_process	reciprocal meiotic recombination
C	0008094	molecular_function	ATP-dependent activity, acting on DNA
C	0030435	biological_process	sporulation resulting in formation of a cellular spore
C	0042030	molecular_function	ATPase inhibitor activity
C	0042148	biological_process	DNA strand invasion
C	0051321	biological_process	meiotic cell cycle
C	0070192	biological_process	chromosome organization involved in meiotic cell cycle
C	0140664	molecular_function	ATP-dependent DNA damage sensor activity
D	0000150	molecular_function	DNA strand exchange activity
D	0000166	molecular_function	nucleotide binding
D	0000709	biological_process	meiotic joint molecule formation
D	0000730	biological_process	DNA recombinase assembly
D	0000794	cellular_component	condensed nuclear chromosome
D	0003677	molecular_function	DNA binding
D	0003690	molecular_function	double-stranded DNA binding
D	0003697	molecular_function	single-stranded DNA binding
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005634	cellular_component	nucleus
D	0006259	biological_process	DNA metabolic process
D	0006281	biological_process	DNA repair
D	0006312	biological_process	mitotic recombination
D	0007130	biological_process	synaptonemal complex assembly
D	0007131	biological_process	reciprocal meiotic recombination
D	0008094	molecular_function	ATP-dependent activity, acting on DNA
D	0030435	biological_process	sporulation resulting in formation of a cellular spore
D	0042030	molecular_function	ATPase inhibitor activity
D	0042148	biological_process	DNA strand invasion
D	0051321	biological_process	meiotic cell cycle
D	0070192	biological_process	chromosome organization involved in meiotic cell cycle
D	0140664	molecular_function	ATP-dependent DNA damage sensor activity
E	0000150	molecular_function	DNA strand exchange activity
E	0000166	molecular_function	nucleotide binding
E	0000709	biological_process	meiotic joint molecule formation
E	0000730	biological_process	DNA recombinase assembly
E	0000794	cellular_component	condensed nuclear chromosome
E	0003677	molecular_function	DNA binding
E	0003690	molecular_function	double-stranded DNA binding
E	0003697	molecular_function	single-stranded DNA binding
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005634	cellular_component	nucleus
E	0006259	biological_process	DNA metabolic process
E	0006281	biological_process	DNA repair
E	0006312	biological_process	mitotic recombination
E	0007130	biological_process	synaptonemal complex assembly
E	0007131	biological_process	reciprocal meiotic recombination
E	0008094	molecular_function	ATP-dependent activity, acting on DNA
E	0030435	biological_process	sporulation resulting in formation of a cellular spore
E	0042030	molecular_function	ATPase inhibitor activity
E	0042148	biological_process	DNA strand invasion
E	0051321	biological_process	meiotic cell cycle
E	0070192	biological_process	chromosome organization involved in meiotic cell cycle
E	0140664	molecular_function	ATP-dependent DNA damage sensor activity
F	0000150	molecular_function	DNA strand exchange activity
F	0000166	molecular_function	nucleotide binding
F	0000709	biological_process	meiotic joint molecule formation
F	0000730	biological_process	DNA recombinase assembly
F	0000794	cellular_component	condensed nuclear chromosome
F	0003677	molecular_function	DNA binding
F	0003690	molecular_function	double-stranded DNA binding
F	0003697	molecular_function	single-stranded DNA binding
F	0005515	molecular_function	protein binding
F	0005524	molecular_function	ATP binding
F	0005634	cellular_component	nucleus
F	0006259	biological_process	DNA metabolic process
F	0006281	biological_process	DNA repair
F	0006312	biological_process	mitotic recombination
F	0007130	biological_process	synaptonemal complex assembly
F	0007131	biological_process	reciprocal meiotic recombination
F	0008094	molecular_function	ATP-dependent activity, acting on DNA
F	0030435	biological_process	sporulation resulting in formation of a cellular spore
F	0042030	molecular_function	ATPase inhibitor activity
F	0042148	biological_process	DNA strand invasion
F	0051321	biological_process	meiotic cell cycle
F	0070192	biological_process	chromosome organization involved in meiotic cell cycle
F	0140664	molecular_function	ATP-dependent DNA damage sensor activity

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	BINDING: BINDING => ECO:0000305

Chain	Residue	Details
A	GLY121
B	GLY121
C	GLY121
D	GLY121
E	GLY121
F	GLY121

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site_id	SWS_FT_FI2
Number of Residues	30
Details	BINDING: BINDING => ECO:0000250|UniProtKB:Q14565

Chain	Residue	Details
A	ARG223
B	ARG305
C	ARG223
C	TYR226
C	ARG229
C	ARG235
C	ARG305
D	ARG223
D	TYR226
D	ARG229
D	ARG235
A	TYR226
D	ARG305
E	ARG223
E	TYR226
E	ARG229
E	ARG235
E	ARG305
F	ARG223
F	TYR226
F	ARG229
F	ARG235
A	ARG229
F	ARG305
A	ARG235
A	ARG305
B	ARG223
B	TYR226
B	ARG229
B	ARG235

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