9CM2
Cryo-EM model derived from localized reconstruction of human adenovirus 6-hexon-FX complex at 4.3A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| J | 0005198 | molecular_function | structural molecule activity |
| J | 0019028 | cellular_component | viral capsid |
| J | 0039623 | cellular_component | T=25 icosahedral viral capsid |
| J | 0042025 | cellular_component | host cell nucleus |
| J | 0043657 | cellular_component | host cell |
| J | 0044423 | cellular_component | virion component |
| J | 0046718 | biological_process | symbiont entry into host cell |
| J | 0075521 | biological_process | microtubule-dependent intracellular transport of viral material towards nucleus |
| J | 0075606 | biological_process | transport of viral material towards nucleus |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| K | 0039623 | cellular_component | T=25 icosahedral viral capsid |
| K | 0042025 | cellular_component | host cell nucleus |
| K | 0043657 | cellular_component | host cell |
| K | 0044423 | cellular_component | virion component |
| K | 0046718 | biological_process | symbiont entry into host cell |
| K | 0075521 | biological_process | microtubule-dependent intracellular transport of viral material towards nucleus |
| K | 0075606 | biological_process | transport of viral material towards nucleus |
| L | 0005198 | molecular_function | structural molecule activity |
| L | 0019028 | cellular_component | viral capsid |
| L | 0039623 | cellular_component | T=25 icosahedral viral capsid |
| L | 0042025 | cellular_component | host cell nucleus |
| L | 0043657 | cellular_component | host cell |
| L | 0044423 | cellular_component | virion component |
| L | 0046718 | biological_process | symbiont entry into host cell |
| L | 0075521 | biological_process | microtubule-dependent intracellular transport of viral material towards nucleus |
| L | 0075606 | biological_process | transport of viral material towards nucleus |
| Z | 0004252 | molecular_function | serine-type endopeptidase activity |
| Z | 0005509 | molecular_function | calcium ion binding |
| Z | 0005576 | cellular_component | extracellular region |
| Z | 0006508 | biological_process | proteolysis |
| Z | 0007596 | biological_process | blood coagulation |
Functional Information from PROSITE/UniProt
| site_id | PS00010 |
| Number of Residues | 12 |
| Details | ASX_HYDROXYL Aspartic acid and asparagine hydroxylation site. CkDglgeYtCtC |
| Chain | Residue | Details |
| Z | CYS61-CYS72 |
| site_id | PS00011 |
| Number of Residues | 26 |
| Details | GLA_1 Vitamin K-dependent carboxylation domain. EcmEEtCsyeearEvfedsdktne.FW |
| Chain | Residue | Details |
| Z | CGU16-TRP41 |
| site_id | PS00022 |
| Number of Residues | 12 |
| Details | EGF_1 EGF-like domain signature 1. CtCleGfeGKnC |
| Chain | Residue | Details |
| Z | CYS70-CYS81 |
| site_id | PS00134 |
| Number of Residues | 6 |
| Details | TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC |
| Chain | Residue | Details |
| Z | LEU232-CYS237 |
| site_id | PS00135 |
| Number of Residues | 12 |
| Details | TRYPSIN_SER Serine proteases, trypsin family, serine active site. DAcqGDSGGPHV |
| Chain | Residue | Details |
| Z | ASP373-VAL384 |
| site_id | PS01186 |
| Number of Residues | 12 |
| Details | EGF_2 EGF-like domain signature 2. CtCleGFegkn....C |
| Chain | Residue | Details |
| Z | CYS70-CYS81 | |
| Z | CYS109-CYS124 |
| site_id | PS01187 |
| Number of Residues | 25 |
| Details | EGF_CA Calcium-binding EGF-like domain signature. DgDQCetsp..........Cqnqgk..CkDglgeYtC |
| Chain | Residue | Details |
| Z | ASP46-CYS70 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | ACT_SITE: Charge relay system |
| Chain | Residue | Details |
| Z | HIS236 | |
| Z | ASP282 | |
| Z | SER379 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 11 |
| Details | MOD_RES: 4-carboxyglutamate => ECO:0000255|PROSITE-ProRule:PRU00463, ECO:0000269|PubMed:6871167 |
| Chain | Residue | Details |
| Z | CGU6 | |
| Z | CGU32 | |
| Z | CGU39 | |
| Z | CGU7 | |
| Z | CGU14 | |
| Z | CGU16 | |
| Z | CGU19 | |
| Z | CGU20 | |
| Z | CGU25 | |
| Z | CGU26 | |
| Z | CGU29 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | MOD_RES: (3R)-3-hydroxyaspartate => ECO:0000269|PubMed:6871167 |
| Chain | Residue | Details |
| Z | ASP63 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | CARBOHYD: O-linked (GalNAc...) threonine => ECO:0000269|PubMed:8243461 |
| Chain | Residue | Details |
| Z | THR159 | |
| Z | THR171 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:8243461 |
| Chain | Residue | Details |
| Z | ASN181 | |
| Z | ASN191 |
