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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9CGC

Yeast 26S proteasome non-substrate-engaged (S1 state)

Functional Information from PROSITE/UniProt
site_idPS00387
Number of Residues7
DetailsPPASE Inorganic pyrophosphatase signature. DDDEIDV
ChainResidueDetails
UASP243-VAL249
site_idPS00388
Number of Residues23
DetailsPROTEASOME_ALPHA_1 Proteasome alpha-type subunits signature. YdrgvStFSPeGRlfQVEYSleA
ChainResidueDetails
ETYR8-ALA30
FTYR6-ALA28
CTYR6-SER28
ATYR12-ALA34
BTYR5-ALA27
GTYR8-ALA30
DTYR4-ALA26
site_idPS00674
Number of Residues19
DetailsAAA AAA-protein family signature. VkVImATNkietLDpALi.R
ChainResidueDetails
IVAL322-ARG340
LTHR321-ARG339
MVAL321-ARG339
JILE288-ARG306
KVAL312-ARG330
HILE349-ARG367
site_idPS00854
Number of Residues48
DetailsPROTEASOME_BETA_1 Proteasome beta-type subunits signature. VGVkFnnGVVIAADtrstqgpivadknca.KlhrispkiwcagaGtaAD
ChainResidueDetails
2VAL33-ASP80
fLEU79-ASP126
eLEU32-ASP79
gLEU5-ASP52
7ILE45-ASP92
CILE36-ASP83
1MET23-ASP70
3VAL13-ASP59
DVAL34-ASP81
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"9087403","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues20
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues9
DetailsBinding site: {}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues35
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues863
DetailsDomain: {"description":"PCI","evidences":[{"source":"PROSITE-ProRule","id":"PRU01185","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues33
DetailsRepeat: {"description":"TPR"}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues270
DetailsDomain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues13
DetailsMotif: {"description":"JAMM motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues185
DetailsDomain: {"description":"VWFA","evidences":[{"source":"PROSITE-ProRule","id":"PRU00219","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"12504901","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues65
DetailsRepeat: {"description":"PC 1"}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues74
DetailsRepeat: {"description":"PC 2"}
ChainResidueDetails
site_idSWS_FT_FI21
Number of Residues68
DetailsRepeat: {"description":"PC 3"}
ChainResidueDetails
site_idSWS_FT_FI22
Number of Residues74
DetailsRepeat: {"description":"PC 4"}
ChainResidueDetails
site_idSWS_FT_FI23
Number of Residues65
DetailsRepeat: {"description":"PC 5"}
ChainResidueDetails
site_idSWS_FT_FI24
Number of Residues66
DetailsRepeat: {"description":"PC 6"}
ChainResidueDetails
site_idSWS_FT_FI25
Number of Residues66
DetailsRepeat: {"description":"PC 7"}
ChainResidueDetails
site_idSWS_FT_FI26
Number of Residues34
DetailsRepeat: {"description":"PC 8"}
ChainResidueDetails
site_idSWS_FT_FI27
Number of Residues37
DetailsRepeat: {"description":"PC 9"}
ChainResidueDetails
site_idSWS_FT_FI28
Number of Residues36
DetailsRepeat: {"description":"PC 10"}
ChainResidueDetails
site_idSWS_FT_FI29
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"12504901","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
Catalytic Information from CSA
site_idMCSA1
Number of Residues8
DetailsM-CSA 177
ChainResidueDetails
BGLN30covalently attached, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, proton acceptor, proton donor
BALA46activator, steric locator
BGLU48activator
BSER62activator, electrostatic stabiliser
BSER76electrostatic stabiliser
BPRO158activator, electrostatic stabiliser
BTHR195activator, steric locator
BGLU198activator, electrostatic stabiliser
site_idMCSA2
Number of Residues8
DetailsM-CSA 177
ChainResidueDetails

238582

PDB entries from 2025-07-09

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