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9BXU

Cryo-EM structure of ATP synthase DP state

Functional Information from GO Data
ChainGOidnamespacecontents
80015078molecular_functionproton transmembrane transporter activity
80015986biological_processproton motive force-driven ATP synthesis
80031966cellular_componentmitochondrial membrane
80042776biological_processproton motive force-driven mitochondrial ATP synthesis
80045259cellular_componentproton-transporting ATP synthase complex
80046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
81902600biological_processproton transmembrane transport
a0005743cellular_componentmitochondrial inner membrane
a0015078molecular_functionproton transmembrane transporter activity
a0015252molecular_functionproton channel activity
a0015986biological_processproton motive force-driven ATP synthesis
a0045259cellular_componentproton-transporting ATP synthase complex
a0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
a1902600biological_processproton transmembrane transport
A0005524molecular_functionATP binding
A0005739cellular_componentmitochondrion
A0005743cellular_componentmitochondrial inner membrane
A0005886cellular_componentplasma membrane
A0015986biological_processproton motive force-driven ATP synthesis
A0032559molecular_functionadenyl ribonucleotide binding
A0045259cellular_componentproton-transporting ATP synthase complex
A0046034biological_processATP metabolic process
A0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
A1902600biological_processproton transmembrane transport
B0005524molecular_functionATP binding
B0005739cellular_componentmitochondrion
B0005743cellular_componentmitochondrial inner membrane
B0005886cellular_componentplasma membrane
B0015986biological_processproton motive force-driven ATP synthesis
B0032559molecular_functionadenyl ribonucleotide binding
B0045259cellular_componentproton-transporting ATP synthase complex
B0046034biological_processATP metabolic process
B0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
B1902600biological_processproton transmembrane transport
c0005739cellular_componentmitochondrion
c0005743cellular_componentmitochondrial inner membrane
c0015078molecular_functionproton transmembrane transporter activity
c0015986biological_processproton motive force-driven ATP synthesis
c0045259cellular_componentproton-transporting ATP synthase complex
c1902600biological_processproton transmembrane transport
C0005524molecular_functionATP binding
C0005739cellular_componentmitochondrion
C0005743cellular_componentmitochondrial inner membrane
C0005886cellular_componentplasma membrane
C0015986biological_processproton motive force-driven ATP synthesis
C0032559molecular_functionadenyl ribonucleotide binding
C0045259cellular_componentproton-transporting ATP synthase complex
C0046034biological_processATP metabolic process
C0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
C1902600biological_processproton transmembrane transport
d0005743cellular_componentmitochondrial inner membrane
d0015078molecular_functionproton transmembrane transporter activity
d0015986biological_processproton motive force-driven ATP synthesis
d0045259cellular_componentproton-transporting ATP synthase complex
d1902600biological_processproton transmembrane transport
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0015986biological_processproton motive force-driven ATP synthesis
D0016020cellular_componentmembrane
D0045259cellular_componentproton-transporting ATP synthase complex
D0046034biological_processATP metabolic process
D0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
D1902600biological_processproton transmembrane transport
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0015986biological_processproton motive force-driven ATP synthesis
E0016020cellular_componentmembrane
E0045259cellular_componentproton-transporting ATP synthase complex
E0046034biological_processATP metabolic process
E0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
E1902600biological_processproton transmembrane transport
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0015986biological_processproton motive force-driven ATP synthesis
F0016020cellular_componentmembrane
F0045259cellular_componentproton-transporting ATP synthase complex
F0046034biological_processATP metabolic process
F0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
F1902600biological_processproton transmembrane transport
G0005739cellular_componentmitochondrion
G0005743cellular_componentmitochondrial inner membrane
G0015986biological_processproton motive force-driven ATP synthesis
G0045259cellular_componentproton-transporting ATP synthase complex
G0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
H0005739cellular_componentmitochondrion
H0005743cellular_componentmitochondrial inner membrane
H0015986biological_processproton motive force-driven ATP synthesis
H0045259cellular_componentproton-transporting ATP synthase complex
H0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
i0005739cellular_componentmitochondrion
i0031966cellular_componentmitochondrial membrane
i0045259cellular_componentproton-transporting ATP synthase complex
I0005739cellular_componentmitochondrion
I0005743cellular_componentmitochondrial inner membrane
I0015986biological_processproton motive force-driven ATP synthesis
I0045259cellular_componentproton-transporting ATP synthase complex
I0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
J0001937biological_processnegative regulation of endothelial cell proliferation
J0002931biological_processresponse to ischemia
J0005516molecular_functioncalmodulin binding
J0005739cellular_componentmitochondrion
J0006783biological_processheme biosynthetic process
J0009986cellular_componentcell surface
J0010667biological_processnegative regulation of cardiac muscle cell apoptotic process
J0019899molecular_functionenzyme binding
J0030218biological_processerythrocyte differentiation
J0032780biological_processnegative regulation of ATP-dependent activity
J0032991cellular_componentprotein-containing complex
J0042030molecular_functionATPase inhibitor activity
J0042802molecular_functionidentical protein binding
J0043532molecular_functionangiostatin binding
J0045732biological_processpositive regulation of protein catabolic process
J0051117molecular_functionATPase binding
J0051346biological_processnegative regulation of hydrolase activity
J0051882biological_processmitochondrial depolarization
J0140260molecular_functionmitochondrial proton-transporting ATP synthase complex binding
J1903747biological_processregulation of protein localization to mitochondrion
J1905091biological_processpositive regulation of type 2 mitophagy
J1905707biological_processnegative regulation of mitochondrial ATP synthesis coupled proton transport
K0015078molecular_functionproton transmembrane transporter activity
K0015986biological_processproton motive force-driven ATP synthesis
K0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
K0045259cellular_componentproton-transporting ATP synthase complex
K1902600biological_processproton transmembrane transport
L0015078molecular_functionproton transmembrane transporter activity
L0015986biological_processproton motive force-driven ATP synthesis
L0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
L0045259cellular_componentproton-transporting ATP synthase complex
L1902600biological_processproton transmembrane transport
M0015078molecular_functionproton transmembrane transporter activity
M0015986biological_processproton motive force-driven ATP synthesis
M0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
M0045259cellular_componentproton-transporting ATP synthase complex
M1902600biological_processproton transmembrane transport
N0015078molecular_functionproton transmembrane transporter activity
N0015986biological_processproton motive force-driven ATP synthesis
N0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
N0045259cellular_componentproton-transporting ATP synthase complex
N1902600biological_processproton transmembrane transport
O0015078molecular_functionproton transmembrane transporter activity
O0015986biological_processproton motive force-driven ATP synthesis
O0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
O0045259cellular_componentproton-transporting ATP synthase complex
O1902600biological_processproton transmembrane transport
P0015078molecular_functionproton transmembrane transporter activity
P0015986biological_processproton motive force-driven ATP synthesis
P0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
P0045259cellular_componentproton-transporting ATP synthase complex
P1902600biological_processproton transmembrane transport
Q0015078molecular_functionproton transmembrane transporter activity
Q0015986biological_processproton motive force-driven ATP synthesis
Q0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
Q0045259cellular_componentproton-transporting ATP synthase complex
Q1902600biological_processproton transmembrane transport
R0015078molecular_functionproton transmembrane transporter activity
R0015986biological_processproton motive force-driven ATP synthesis
R0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
R0045259cellular_componentproton-transporting ATP synthase complex
R1902600biological_processproton transmembrane transport
S0005743cellular_componentmitochondrial inner membrane
S0015986biological_processproton motive force-driven ATP synthesis
S0016020cellular_componentmembrane
S0042776biological_processproton motive force-driven mitochondrial ATP synthesis
S0045259cellular_componentproton-transporting ATP synthase complex
S0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
T0005739cellular_componentmitochondrion
T0015078molecular_functionproton transmembrane transporter activity
T0015986biological_processproton motive force-driven ATP synthesis
T0031966cellular_componentmitochondrial membrane
T0045259cellular_componentproton-transporting ATP synthase complex
T0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
T1902600biological_processproton transmembrane transport
U0005739cellular_componentmitochondrion
U0005743cellular_componentmitochondrial inner membrane
U0015078molecular_functionproton transmembrane transporter activity
U0015986biological_processproton motive force-driven ATP synthesis
U0016020cellular_componentmembrane
U0042776biological_processproton motive force-driven mitochondrial ATP synthesis
U0045259cellular_componentproton-transporting ATP synthase complex
U0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
U1902600biological_processproton transmembrane transport
V0005739cellular_componentmitochondrion
V0005743cellular_componentmitochondrial inner membrane
V0015078molecular_functionproton transmembrane transporter activity
V0015986biological_processproton motive force-driven ATP synthesis
V0045259cellular_componentproton-transporting ATP synthase complex
V1902600biological_processproton transmembrane transport
W0005739cellular_componentmitochondrion
W0005743cellular_componentmitochondrial inner membrane
W0045259cellular_componentproton-transporting ATP synthase complex
Functional Information from PROSITE/UniProt
site_idPS00152
Number of Residues10
DetailsATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAVDPLDSTS
ChainResidueDetails
DPRO438-SER447
APRO406-SER415

site_idPS00153
Number of Residues14
DetailsATPASE_GAMMA ATP synthase gamma subunit signature. ITkEliEiisGAaA
ChainResidueDetails
GILE283-ALA296

site_idPS00389
Number of Residues20
DetailsATPASE_DELTA ATP synthase delta (OSCP) subunit signature. LkLevkVDpSImGGMIVRiG
ChainResidueDetails
SLEU148-GLY167

site_idPS00449
Number of Residues10
DetailsATPASE_A ATP synthase a subunit signature. ALAVRLTANI
ChainResidueDetails
aALA155-ILE164

site_idPS00605
Number of Residues22
DetailsATPASE_C ATP synthase c subunit signature. ARNPslkqqLfSyaILgfaLsE
ChainResidueDetails
KALA37-GLU58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues136
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q06185","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues17
DetailsTransmembrane: {"description":"Helical","evidences":[{"source":"UniProtKB","id":"P56134","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P56135","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues3
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P18859","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P97450","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P97450","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P21571","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

254587

PDB entries from 2026-06-03

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