Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9BFY

Tri-complex of Compound-12, KRAS G12C, and CypA

This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgSsFHRIIpgFMcQGG
ChainResidueDetails
CTYR48-GLY65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378, ECO:0007744|PubMed:25944712
ChainResidueDetails
CMET1
DMET1
AALA59
AASN116
BGLY10
BVAL29
BALA59
BASN116

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylvaline; partial; in Peptidyl-prolyl cis-trans isomerase A, N-terminally processed => ECO:0000269|PubMed:25489052, ECO:0000269|Ref.12, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:25944712
ChainResidueDetails
CVAL2
DVAL2

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS28
CLYS82
DLYS28
DLYS82

site_idSWS_FT_FI4
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS44
CLYS76
CLYS131
DLYS44
DLYS76
DLYS131

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
CSER77
DSER77

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:20068231
ChainResidueDetails
CTHR93
DTHR93

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:20364129, ECO:0000269|PubMed:25678563, ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS125
DLYS125

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P17742
ChainResidueDetails
CLYS133
DLYS133

site_idSWS_FT_FI9
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
CASN108
DASN108

site_idSWS_FT_FI10
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
ChainResidueDetails
CLYS28
DLYS28

site_idSWS_FT_FI11
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
ChainResidueDetails
CLYS82
DLYS82

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
CARG55electrostatic stabiliser, hydrogen bond donor, steric role
CPHE60polar/non-polar interaction, steric role
CGLN63electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
CASN102electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
CPHE113polar/non-polar interaction, steric role
CLEU122polar/non-polar interaction, steric role
CHIS126polar/non-polar interaction, steric role

site_idMCSA2
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
DARG55electrostatic stabiliser, hydrogen bond donor, steric role
DPHE60polar/non-polar interaction, steric role
DGLN63electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
DASN102electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
DPHE113polar/non-polar interaction, steric role
DLEU122polar/non-polar interaction, steric role
DHIS126polar/non-polar interaction, steric role

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon