9AS8
Global reconstruction of 5-HT2AR bound to psilocin in complex with a mini-Gq protein and scFv16 obtained by cryo-electron microscopy (cryoEM)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001587 | molecular_function | Gq/11-coupled serotonin receptor activity |
A | 0001618 | molecular_function | virus receptor activity |
A | 0001659 | biological_process | temperature homeostasis |
A | 0002720 | biological_process | positive regulation of cytokine production involved in immune response |
A | 0004930 | molecular_function | G protein-coupled receptor activity |
A | 0004993 | molecular_function | G protein-coupled serotonin receptor activity |
A | 0005515 | molecular_function | protein binding |
A | 0005883 | cellular_component | neurofilament |
A | 0005886 | cellular_component | plasma membrane |
A | 0005901 | cellular_component | caveola |
A | 0006096 | biological_process | glycolytic process |
A | 0006874 | biological_process | intracellular calcium ion homeostasis |
A | 0007165 | biological_process | signal transduction |
A | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
A | 0007187 | biological_process | G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger |
A | 0007204 | biological_process | positive regulation of cytosolic calcium ion concentration |
A | 0007208 | biological_process | phospholipase C-activating serotonin receptor signaling pathway |
A | 0007210 | biological_process | serotonin receptor signaling pathway |
A | 0007268 | biological_process | chemical synaptic transmission |
A | 0007613 | biological_process | memory |
A | 0008284 | biological_process | positive regulation of cell population proliferation |
A | 0009410 | biological_process | response to xenobiotic stimulus |
A | 0010513 | biological_process | positive regulation of phosphatidylinositol biosynthetic process |
A | 0014059 | biological_process | regulation of dopamine secretion |
A | 0014824 | biological_process | artery smooth muscle contraction |
A | 0014832 | biological_process | urinary bladder smooth muscle contraction |
A | 0016020 | cellular_component | membrane |
A | 0030296 | molecular_function | protein tyrosine kinase activator activity |
A | 0030424 | cellular_component | axon |
A | 0030425 | cellular_component | dendrite |
A | 0030594 | molecular_function | neurotransmitter receptor activity |
A | 0031410 | cellular_component | cytoplasmic vesicle |
A | 0031652 | biological_process | positive regulation of heat generation |
A | 0042220 | biological_process | response to cocaine |
A | 0042734 | cellular_component | presynaptic membrane |
A | 0042802 | molecular_function | identical protein binding |
A | 0042995 | cellular_component | cell projection |
A | 0043025 | cellular_component | neuronal cell body |
A | 0043198 | cellular_component | dendritic shaft |
A | 0043267 | biological_process | negative regulation of potassium ion transport |
A | 0043525 | biological_process | positive regulation of neuron apoptotic process |
A | 0044380 | biological_process | protein localization to cytoskeleton |
A | 0044877 | molecular_function | protein-containing complex binding |
A | 0045202 | cellular_component | synapse |
A | 0045211 | cellular_component | postsynaptic membrane |
A | 0045600 | biological_process | positive regulation of fat cell differentiation |
A | 0045821 | biological_process | positive regulation of glycolytic process |
A | 0045907 | biological_process | positive regulation of vasoconstriction |
A | 0046718 | biological_process | symbiont entry into host cell |
A | 0046960 | biological_process | sensitization |
A | 0048148 | biological_process | behavioral response to cocaine |
A | 0050729 | biological_process | positive regulation of inflammatory response |
A | 0050951 | biological_process | sensory perception of temperature stimulus |
A | 0050965 | biological_process | detection of temperature stimulus involved in sensory perception of pain |
A | 0050966 | biological_process | detection of mechanical stimulus involved in sensory perception of pain |
A | 0051209 | biological_process | release of sequestered calcium ion into cytosol |
A | 0051378 | molecular_function | serotonin binding |
A | 0051967 | biological_process | negative regulation of synaptic transmission, glutamatergic |
A | 0070374 | biological_process | positive regulation of ERK1 and ERK2 cascade |
A | 0070852 | cellular_component | cell body fiber |
A | 0071886 | molecular_function | 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding |
A | 0098664 | biological_process | G protein-coupled serotonin receptor signaling pathway |
A | 0098666 | cellular_component | G protein-coupled serotonin receptor complex |
A | 0098793 | cellular_component | presynapse |
A | 0098978 | cellular_component | glutamatergic synapse |
A | 0099171 | biological_process | presynaptic modulation of chemical synaptic transmission |
A | 0099589 | molecular_function | serotonin receptor activity |
A | 1900119 | biological_process | positive regulation of execution phase of apoptosis |
A | 1901731 | biological_process | positive regulation of platelet aggregation |
A | 2000573 | biological_process | positive regulation of DNA biosynthetic process |
C | 0001750 | cellular_component | photoreceptor outer segment |
C | 0003924 | molecular_function | GTPase activity |
C | 0005515 | molecular_function | protein binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005765 | cellular_component | lysosomal membrane |
C | 0005829 | cellular_component | cytosol |
C | 0005834 | cellular_component | heterotrimeric G-protein complex |
C | 0005886 | cellular_component | plasma membrane |
C | 0007165 | biological_process | signal transduction |
C | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
C | 0007191 | biological_process | adenylate cyclase-activating dopamine receptor signaling pathway |
C | 0007200 | biological_process | phospholipase C-activating G protein-coupled receptor signaling pathway |
C | 0007213 | biological_process | G protein-coupled acetylcholine receptor signaling pathway |
C | 0007265 | biological_process | Ras protein signal transduction |
C | 0008283 | biological_process | cell population proliferation |
C | 0016020 | cellular_component | membrane |
C | 0030159 | molecular_function | signaling receptor complex adaptor activity |
C | 0044877 | molecular_function | protein-containing complex binding |
C | 0045202 | cellular_component | synapse |
C | 0050909 | biological_process | sensory perception of taste |
C | 0051020 | molecular_function | GTPase binding |
C | 0060041 | biological_process | retina development in camera-type eye |
C | 0070062 | cellular_component | extracellular exosome |
C | 0071380 | biological_process | cellular response to prostaglandin E stimulus |
C | 0071870 | biological_process | cellular response to catecholamine stimulus |
C | 0097381 | cellular_component | photoreceptor disc membrane |
C | 1903561 | cellular_component | extracellular vesicle |
D | 0005515 | molecular_function | protein binding |
D | 0005834 | cellular_component | heterotrimeric G-protein complex |
D | 0005886 | cellular_component | plasma membrane |
D | 0007165 | biological_process | signal transduction |
D | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
D | 0007191 | biological_process | adenylate cyclase-activating dopamine receptor signaling pathway |
D | 0016020 | cellular_component | membrane |
D | 0031681 | molecular_function | G-protein beta-subunit binding |
D | 0045202 | cellular_component | synapse |
D | 0048144 | biological_process | fibroblast proliferation |
D | 0070062 | cellular_component | extracellular exosome |
D | 0071380 | biological_process | cellular response to prostaglandin E stimulus |
D | 0071870 | biological_process | cellular response to catecholamine stimulus |
Functional Information from PROSITE/UniProt
site_id | PS00237 |
Number of Residues | 17 |
Details | G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. ASImHLCAISLDRYVaI |
Chain | Residue | Details |
A | ALA161-ILE177 |
site_id | PS00678 |
Number of Residues | 15 |
Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsqDgKLIIWDS |
Chain | Residue | Details |
C | LEU70-SER84 | |
C | ILE157-ILE171 | |
C | LEU285-ALA299 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 16 |
Details | Transmembrane: {"description":"Helical; Name=1","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 32 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 25 |
Details | Transmembrane: {"description":"Helical; Name=2","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 24 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 24 |
Details | Transmembrane: {"description":"Helical; Name=3","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 23 |
Details | Transmembrane: {"description":"Helical; Name=4","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 25 |
Details | Transmembrane: {"description":"Helical; Name=5","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 25 |
Details | Transmembrane: {"description":"Helical; Name=6","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 25 |
Details | Transmembrane: {"description":"Helical; Name=7","evidences":[{"source":"PubMed","id":"36171289","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RAN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | Motif: {"description":"DRY motif; important for ligand-induced conformation changes","evidences":[{"source":"UniProtKB","id":"P41595","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 4 |
Details | Motif: {"description":"NPxxY motif; important for ligand-induced conformation changes and signaling","evidences":[{"source":"UniProtKB","id":"P41595","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"35084960","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7WC4","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"35084960","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7WC4","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 1 |
Details | Site: {"description":"Hydrophobic barrier that decreases the speed of ligand binding and dissociation","evidences":[{"source":"PubMed","id":"28129538","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 48 |
Details | Repeat: {"description":"WD 1","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 45 |
Details | Repeat: {"description":"WD 2","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 40 |
Details | Repeat: {"description":"WD 3","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 41 |
Details | Repeat: {"description":"WD 4","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 43 |
Details | Repeat: {"description":"WD 5","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 41 |
Details | Repeat: {"description":"WD 6","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 7","evidences":[{"source":"PubMed","id":"38600377","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38776963","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VY7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8XQT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8YKY","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphohistidine","evidences":[{"source":"UniProtKB","id":"P62871","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |