8XPY
Structure of Nipah virus Malaysia string G protein ectodomain monomer bound to single-domain antibody n425 at 3.63 Angstroms overall resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004308 | molecular_function | exo-alpha-sialidase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0016020 | cellular_component | membrane |
| A | 0019031 | cellular_component | viral envelope |
| A | 0019058 | biological_process | viral life cycle |
| A | 0019062 | biological_process | virion attachment to host cell |
| A | 0020002 | cellular_component | host cell plasma membrane |
| A | 0033644 | cellular_component | host cell membrane |
| A | 0039663 | biological_process | membrane fusion involved in viral entry into host cell |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0044423 | cellular_component | virion component |
| A | 0046718 | biological_process | symbiont entry into host cell |
| A | 0046789 | molecular_function | host cell surface receptor binding |
| A | 0055036 | cellular_component | virion membrane |
| A | 0075509 | biological_process | endocytosis involved in viral entry into host cell |
| A | 0075512 | biological_process | clathrin-dependent endocytosis of virus by host cell |
| A | 0098670 | biological_process | entry receptor-mediated virion attachment to host cell |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 48 |
| Details | TOPO_DOM: Intravirion => ECO:0000255 |
| Chain | Residue | Details |
| A | MET1-ALA49 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 20 |
| Details | TRANSMEM: Helical => ECO:0000255 |
| Chain | Residue | Details |
| A | PHE50-ILE70 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 531 |
| Details | TOPO_DOM: Virion surface => ECO:0000255 |
| Chain | Residue | Details |
| A | GLN71-THR602 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255 |
| Chain | Residue | Details |
| A | ASN72 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:35239409 |
| Chain | Residue | Details |
| A | ASN159 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:18815311, ECO:0000269|PubMed:33306954, ECO:0007744|PDB:2VWD, ECO:0007744|PDB:6VY5, ECO:0007744|PDB:8JA5 |
| Chain | Residue | Details |
| A | ASN306 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:18632560, ECO:0000269|PubMed:18815311, ECO:0000269|PubMed:33306954, ECO:0007744|PDB:2VWD, ECO:0007744|PDB:3D11, ECO:0007744|PDB:3D12, ECO:0007744|PDB:6VY5 |
| Chain | Residue | Details |
| A | ASN378 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:18488039, ECO:0000269|PubMed:18815311, ECO:0000269|PubMed:33306954, ECO:0007744|PDB:2VSM, ECO:0007744|PDB:2VWD, ECO:0007744|PDB:6VY5, ECO:0007744|PDB:8JA5 |
| Chain | Residue | Details |
| A | ASN417 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:18488039, ECO:0000269|PubMed:18815311, ECO:0000269|PubMed:33306954, ECO:0007744|PDB:2VSM, ECO:0007744|PDB:2VWD, ECO:0007744|PDB:6VY5 |
| Chain | Residue | Details |
| A | ASN481 | |
| A | ASN529 |
