8XPM

Mature virion portal of phage lambda with DNA

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
B	0003677	molecular_function	DNA binding
B	0005198	molecular_function	structural molecule activity
B	0019028	cellular_component	viral capsid
B	0019068	biological_process	virion assembly
B	0046718	biological_process	symbiont entry into host cell
B	0046798	cellular_component	viral portal complex
B	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
B1	0003677	molecular_function	DNA binding
B1	0005198	molecular_function	structural molecule activity
B1	0019028	cellular_component	viral capsid
B1	0019068	biological_process	virion assembly
B1	0046718	biological_process	symbiont entry into host cell
B1	0046798	cellular_component	viral portal complex
B1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
B2	0003677	molecular_function	DNA binding
B2	0005198	molecular_function	structural molecule activity
B2	0019028	cellular_component	viral capsid
B2	0019068	biological_process	virion assembly
B2	0046718	biological_process	symbiont entry into host cell
B2	0046798	cellular_component	viral portal complex
B2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
B3	0003677	molecular_function	DNA binding
B3	0005198	molecular_function	structural molecule activity
B3	0019028	cellular_component	viral capsid
B3	0019068	biological_process	virion assembly
B3	0046718	biological_process	symbiont entry into host cell
B3	0046798	cellular_component	viral portal complex
B3	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
B4	0003677	molecular_function	DNA binding
B4	0005198	molecular_function	structural molecule activity
B4	0019028	cellular_component	viral capsid
B4	0019068	biological_process	virion assembly
B4	0046718	biological_process	symbiont entry into host cell
B4	0046798	cellular_component	viral portal complex
B4	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
B5	0003677	molecular_function	DNA binding
B5	0005198	molecular_function	structural molecule activity
B5	0019028	cellular_component	viral capsid
B5	0019068	biological_process	virion assembly
B5	0046718	biological_process	symbiont entry into host cell
B5	0046798	cellular_component	viral portal complex
B5	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
O	0030430	cellular_component	host cell cytoplasm
O	0046718	biological_process	symbiont entry into host cell
O	0098003	biological_process	viral tail assembly
O	0098015	cellular_component	virus tail
O	0098026	cellular_component	virus tail, tube
O	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
O1	0030430	cellular_component	host cell cytoplasm
O1	0046718	biological_process	symbiont entry into host cell
O1	0098003	biological_process	viral tail assembly
O1	0098015	cellular_component	virus tail
O1	0098026	cellular_component	virus tail, tube
O1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
O2	0030430	cellular_component	host cell cytoplasm
O2	0046718	biological_process	symbiont entry into host cell
O2	0098003	biological_process	viral tail assembly
O2	0098015	cellular_component	virus tail
O2	0098026	cellular_component	virus tail, tube
O2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
P	0030430	cellular_component	host cell cytoplasm
P	0046718	biological_process	symbiont entry into host cell
P	0098003	biological_process	viral tail assembly
P	0098015	cellular_component	virus tail
P	0098026	cellular_component	virus tail, tube
P	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
P1	0030430	cellular_component	host cell cytoplasm
P1	0046718	biological_process	symbiont entry into host cell
P1	0098003	biological_process	viral tail assembly
P1	0098015	cellular_component	virus tail
P1	0098026	cellular_component	virus tail, tube
P1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
P2	0030430	cellular_component	host cell cytoplasm
P2	0046718	biological_process	symbiont entry into host cell
P2	0098003	biological_process	viral tail assembly
P2	0098015	cellular_component	virus tail
P2	0098026	cellular_component	virus tail, tube
P2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
Q	0030430	cellular_component	host cell cytoplasm
Q	0046718	biological_process	symbiont entry into host cell
Q	0098003	biological_process	viral tail assembly
Q	0098015	cellular_component	virus tail
Q	0098026	cellular_component	virus tail, tube
Q	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
Q1	0030430	cellular_component	host cell cytoplasm
Q1	0046718	biological_process	symbiont entry into host cell
Q1	0098003	biological_process	viral tail assembly
Q1	0098015	cellular_component	virus tail
Q1	0098026	cellular_component	virus tail, tube
Q1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
Q2	0030430	cellular_component	host cell cytoplasm
Q2	0046718	biological_process	symbiont entry into host cell
Q2	0098003	biological_process	viral tail assembly
Q2	0098015	cellular_component	virus tail
Q2	0098026	cellular_component	virus tail, tube
Q2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
R	0030430	cellular_component	host cell cytoplasm
R	0046718	biological_process	symbiont entry into host cell
R	0098003	biological_process	viral tail assembly
R	0098015	cellular_component	virus tail
R	0098026	cellular_component	virus tail, tube
R	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
R1	0030430	cellular_component	host cell cytoplasm
R1	0046718	biological_process	symbiont entry into host cell
R1	0098003	biological_process	viral tail assembly
R1	0098015	cellular_component	virus tail
R1	0098026	cellular_component	virus tail, tube
R1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
R2	0030430	cellular_component	host cell cytoplasm
R2	0046718	biological_process	symbiont entry into host cell
R2	0098003	biological_process	viral tail assembly
R2	0098015	cellular_component	virus tail
R2	0098026	cellular_component	virus tail, tube
R2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U	0030430	cellular_component	host cell cytoplasm
U	0046718	biological_process	symbiont entry into host cell
U	0098003	biological_process	viral tail assembly
U	0098015	cellular_component	virus tail
U	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U1	0030430	cellular_component	host cell cytoplasm
U1	0046718	biological_process	symbiont entry into host cell
U1	0098003	biological_process	viral tail assembly
U1	0098015	cellular_component	virus tail
U1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U2	0030430	cellular_component	host cell cytoplasm
U2	0046718	biological_process	symbiont entry into host cell
U2	0098003	biological_process	viral tail assembly
U2	0098015	cellular_component	virus tail
U2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U3	0030430	cellular_component	host cell cytoplasm
U3	0046718	biological_process	symbiont entry into host cell
U3	0098003	biological_process	viral tail assembly
U3	0098015	cellular_component	virus tail
U3	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U4	0030430	cellular_component	host cell cytoplasm
U4	0046718	biological_process	symbiont entry into host cell
U4	0098003	biological_process	viral tail assembly
U4	0098015	cellular_component	virus tail
U4	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
U5	0030430	cellular_component	host cell cytoplasm
U5	0046718	biological_process	symbiont entry into host cell
U5	0098003	biological_process	viral tail assembly
U5	0098015	cellular_component	virus tail
U5	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
V	0030430	cellular_component	host cell cytoplasm
V	0046718	biological_process	symbiont entry into host cell
V	0098003	biological_process	viral tail assembly
V	0098015	cellular_component	virus tail
V	0098026	cellular_component	virus tail, tube
V	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
V1	0030430	cellular_component	host cell cytoplasm
V1	0046718	biological_process	symbiont entry into host cell
V1	0098003	biological_process	viral tail assembly
V1	0098015	cellular_component	virus tail
V1	0098026	cellular_component	virus tail, tube
V1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
V2	0030430	cellular_component	host cell cytoplasm
V2	0046718	biological_process	symbiont entry into host cell
V2	0098003	biological_process	viral tail assembly
V2	0098015	cellular_component	virus tail
V2	0098026	cellular_component	virus tail, tube
V2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
W	0044423	cellular_component	virion component
W1	0044423	cellular_component	virion component
W2	0044423	cellular_component	virion component
W3	0044423	cellular_component	virion component
W4	0044423	cellular_component	virion component
W5	0044423	cellular_component	virion component
b	0003677	molecular_function	DNA binding
b	0005198	molecular_function	structural molecule activity
b	0019028	cellular_component	viral capsid
b	0019068	biological_process	virion assembly
b	0046718	biological_process	symbiont entry into host cell
b	0046798	cellular_component	viral portal complex
b	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
b1	0003677	molecular_function	DNA binding
b1	0005198	molecular_function	structural molecule activity
b1	0019028	cellular_component	viral capsid
b1	0019068	biological_process	virion assembly
b1	0046718	biological_process	symbiont entry into host cell
b1	0046798	cellular_component	viral portal complex
b1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
b2	0003677	molecular_function	DNA binding
b2	0005198	molecular_function	structural molecule activity
b2	0019028	cellular_component	viral capsid
b2	0019068	biological_process	virion assembly
b2	0046718	biological_process	symbiont entry into host cell
b2	0046798	cellular_component	viral portal complex
b2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
b3	0003677	molecular_function	DNA binding
b3	0005198	molecular_function	structural molecule activity
b3	0019028	cellular_component	viral capsid
b3	0019068	biological_process	virion assembly
b3	0046718	biological_process	symbiont entry into host cell
b3	0046798	cellular_component	viral portal complex
b3	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
b4	0003677	molecular_function	DNA binding
b4	0005198	molecular_function	structural molecule activity
b4	0019028	cellular_component	viral capsid
b4	0019068	biological_process	virion assembly
b4	0046718	biological_process	symbiont entry into host cell
b4	0046798	cellular_component	viral portal complex
b4	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
b5	0003677	molecular_function	DNA binding
b5	0005198	molecular_function	structural molecule activity
b5	0019028	cellular_component	viral capsid
b5	0019068	biological_process	virion assembly
b5	0046718	biological_process	symbiont entry into host cell
b5	0046798	cellular_component	viral portal complex
b5	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
f	0019068	biological_process	virion assembly
f	0030430	cellular_component	host cell cytoplasm
f	0044423	cellular_component	virion component
f1	0019068	biological_process	virion assembly
f1	0030430	cellular_component	host cell cytoplasm
f1	0044423	cellular_component	virion component
f2	0019068	biological_process	virion assembly
f2	0030430	cellular_component	host cell cytoplasm
f2	0044423	cellular_component	virion component
f3	0019068	biological_process	virion assembly
f3	0030430	cellular_component	host cell cytoplasm
f3	0044423	cellular_component	virion component
f4	0019068	biological_process	virion assembly
f4	0030430	cellular_component	host cell cytoplasm
f4	0044423	cellular_component	virion component
f5	0019068	biological_process	virion assembly
f5	0030430	cellular_component	host cell cytoplasm
f5	0044423	cellular_component	virion component
o	0030430	cellular_component	host cell cytoplasm
o	0046718	biological_process	symbiont entry into host cell
o	0098003	biological_process	viral tail assembly
o	0098015	cellular_component	virus tail
o	0098026	cellular_component	virus tail, tube
o	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
o1	0030430	cellular_component	host cell cytoplasm
o1	0046718	biological_process	symbiont entry into host cell
o1	0098003	biological_process	viral tail assembly
o1	0098015	cellular_component	virus tail
o1	0098026	cellular_component	virus tail, tube
o1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
o2	0030430	cellular_component	host cell cytoplasm
o2	0046718	biological_process	symbiont entry into host cell
o2	0098003	biological_process	viral tail assembly
o2	0098015	cellular_component	virus tail
o2	0098026	cellular_component	virus tail, tube
o2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
p	0030430	cellular_component	host cell cytoplasm
p	0046718	biological_process	symbiont entry into host cell
p	0098003	biological_process	viral tail assembly
p	0098015	cellular_component	virus tail
p	0098026	cellular_component	virus tail, tube
p	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
p1	0030430	cellular_component	host cell cytoplasm
p1	0046718	biological_process	symbiont entry into host cell
p1	0098003	biological_process	viral tail assembly
p1	0098015	cellular_component	virus tail
p1	0098026	cellular_component	virus tail, tube
p1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
p2	0030430	cellular_component	host cell cytoplasm
p2	0046718	biological_process	symbiont entry into host cell
p2	0098003	biological_process	viral tail assembly
p2	0098015	cellular_component	virus tail
p2	0098026	cellular_component	virus tail, tube
p2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
q	0030430	cellular_component	host cell cytoplasm
q	0046718	biological_process	symbiont entry into host cell
q	0098003	biological_process	viral tail assembly
q	0098015	cellular_component	virus tail
q	0098026	cellular_component	virus tail, tube
q	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
q1	0030430	cellular_component	host cell cytoplasm
q1	0046718	biological_process	symbiont entry into host cell
q1	0098003	biological_process	viral tail assembly
q1	0098015	cellular_component	virus tail
q1	0098026	cellular_component	virus tail, tube
q1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
q2	0030430	cellular_component	host cell cytoplasm
q2	0046718	biological_process	symbiont entry into host cell
q2	0098003	biological_process	viral tail assembly
q2	0098015	cellular_component	virus tail
q2	0098026	cellular_component	virus tail, tube
q2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
r	0030430	cellular_component	host cell cytoplasm
r	0046718	biological_process	symbiont entry into host cell
r	0098003	biological_process	viral tail assembly
r	0098015	cellular_component	virus tail
r	0098026	cellular_component	virus tail, tube
r	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
r1	0030430	cellular_component	host cell cytoplasm
r1	0046718	biological_process	symbiont entry into host cell
r1	0098003	biological_process	viral tail assembly
r1	0098015	cellular_component	virus tail
r1	0098026	cellular_component	virus tail, tube
r1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
r2	0030430	cellular_component	host cell cytoplasm
r2	0046718	biological_process	symbiont entry into host cell
r2	0098003	biological_process	viral tail assembly
r2	0098015	cellular_component	virus tail
r2	0098026	cellular_component	virus tail, tube
r2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
v	0030430	cellular_component	host cell cytoplasm
v	0046718	biological_process	symbiont entry into host cell
v	0098003	biological_process	viral tail assembly
v	0098015	cellular_component	virus tail
v	0098026	cellular_component	virus tail, tube
v	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
v1	0030430	cellular_component	host cell cytoplasm
v1	0046718	biological_process	symbiont entry into host cell
v1	0098003	biological_process	viral tail assembly
v1	0098015	cellular_component	virus tail
v1	0098026	cellular_component	virus tail, tube
v1	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
v2	0030430	cellular_component	host cell cytoplasm
v2	0046718	biological_process	symbiont entry into host cell
v2	0098003	biological_process	viral tail assembly
v2	0098015	cellular_component	virus tail
v2	0098026	cellular_component	virus tail, tube
v2	0099001	biological_process	symbiont genome ejection through host cell envelope, long flexible tail mechanism
w	0044423	cellular_component	virion component
w1	0044423	cellular_component	virion component
w2	0044423	cellular_component	virion component
w3	0044423	cellular_component	virion component
w4	0044423	cellular_component	virion component
w5	0044423	cellular_component	virion component

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	12
Details	SITE: Cleavage; by viral protease => ECO:0000255|HAMAP-Rule:MF_04135, ECO:0000269|PubMed:20620152

Chain	Residue	Details
B	ALA22
b4	ALA22
B5	ALA22
b5	ALA22
b	ALA22
B1	ALA22
b1	ALA22
B2	ALA22
b2	ALA22
B3	ALA22
b3	ALA22
B4	ALA22

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