8XIE

Archaeal exosome complex (Rrp4-Rrp41-Rrp42)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000175	molecular_function	3'-5'-RNA exonuclease activity
A	0000177	cellular_component	cytoplasmic exosome (RNase complex)
A	0000178	cellular_component	exosome (RNase complex)
A	0000956	biological_process	nuclear-transcribed mRNA catabolic process
A	0003723	molecular_function	RNA binding
A	0005737	cellular_component	cytoplasm
A	0006401	biological_process	RNA catabolic process
A	0010467	biological_process	gene expression
A	0016075	biological_process	rRNA catabolic process
A	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
A	0070013	cellular_component	intracellular organelle lumen
A	0071025	biological_process	RNA surveillance
A	1902494	cellular_component	catalytic complex
B	0000177	cellular_component	cytoplasmic exosome (RNase complex)
B	0000178	cellular_component	exosome (RNase complex)
B	0005737	cellular_component	cytoplasm
B	0006401	biological_process	RNA catabolic process
B	0016075	biological_process	rRNA catabolic process
B	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding
C	0000175	molecular_function	3'-5'-RNA exonuclease activity
C	0000177	cellular_component	cytoplasmic exosome (RNase complex)
C	0000178	cellular_component	exosome (RNase complex)
C	0000956	biological_process	nuclear-transcribed mRNA catabolic process
C	0003723	molecular_function	RNA binding
C	0005737	cellular_component	cytoplasm
C	0006401	biological_process	RNA catabolic process
C	0010467	biological_process	gene expression
C	0016075	biological_process	rRNA catabolic process
C	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
C	0070013	cellular_component	intracellular organelle lumen
C	0071025	biological_process	RNA surveillance
C	1902494	cellular_component	catalytic complex
D	0000175	molecular_function	3'-5'-RNA exonuclease activity
D	0000177	cellular_component	cytoplasmic exosome (RNase complex)
D	0000178	cellular_component	exosome (RNase complex)
D	0000956	biological_process	nuclear-transcribed mRNA catabolic process
D	0003723	molecular_function	RNA binding
D	0005737	cellular_component	cytoplasm
D	0006401	biological_process	RNA catabolic process
D	0010467	biological_process	gene expression
D	0016075	biological_process	rRNA catabolic process
D	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
D	0070013	cellular_component	intracellular organelle lumen
D	0071025	biological_process	RNA surveillance
D	1902494	cellular_component	catalytic complex
E	0000177	cellular_component	cytoplasmic exosome (RNase complex)
E	0000178	cellular_component	exosome (RNase complex)
E	0005737	cellular_component	cytoplasm
E	0006401	biological_process	RNA catabolic process
E	0016075	biological_process	rRNA catabolic process
E	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding
F	0000177	cellular_component	cytoplasmic exosome (RNase complex)
F	0000178	cellular_component	exosome (RNase complex)
F	0005737	cellular_component	cytoplasm
F	0006401	biological_process	RNA catabolic process
F	0016075	biological_process	rRNA catabolic process
F	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding
G	0000178	cellular_component	exosome (RNase complex)
G	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
G	0003676	molecular_function	nucleic acid binding
G	0003723	molecular_function	RNA binding
G	0005737	cellular_component	cytoplasm
G	0006401	biological_process	RNA catabolic process
G	0008143	molecular_function	poly(A) binding
G	0034475	biological_process	U4 snRNA 3'-end processing
G	0071034	biological_process	CUT catabolic process
G	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing
H	0000178	cellular_component	exosome (RNase complex)
H	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
H	0003676	molecular_function	nucleic acid binding
H	0003723	molecular_function	RNA binding
H	0005737	cellular_component	cytoplasm
H	0006401	biological_process	RNA catabolic process
H	0008143	molecular_function	poly(A) binding
H	0034475	biological_process	U4 snRNA 3'-end processing
H	0071034	biological_process	CUT catabolic process
H	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing
I	0000178	cellular_component	exosome (RNase complex)
I	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
I	0003676	molecular_function	nucleic acid binding
I	0003723	molecular_function	RNA binding
I	0005737	cellular_component	cytoplasm
I	0006401	biological_process	RNA catabolic process
I	0008143	molecular_function	poly(A) binding
I	0034475	biological_process	U4 snRNA 3'-end processing
I	0071034	biological_process	CUT catabolic process
I	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	207
Details	Domain: {"description":"S1 motif","evidences":[{"source":"HAMAP-Rule","id":"MF_00623","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	174
Details	Domain: {"description":"KH","evidences":[{"source":"HAMAP-Rule","id":"MF_00623","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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