8X8A
Crystal structure of STBD1 LIR motif in complex with GABARAPL1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000045 | biological_process | autophagosome assembly |
| A | 0000421 | cellular_component | autophagosome membrane |
| A | 0000423 | biological_process | mitophagy |
| A | 0005515 | molecular_function | protein binding |
| A | 0005543 | molecular_function | phospholipid binding |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0005776 | cellular_component | autophagosome |
| A | 0005783 | cellular_component | endoplasmic reticulum |
| A | 0005794 | cellular_component | Golgi apparatus |
| A | 0005829 | cellular_component | cytosol |
| A | 0005856 | cellular_component | cytoskeleton |
| A | 0005874 | cellular_component | microtubule |
| A | 0006914 | biological_process | autophagy |
| A | 0006995 | biological_process | cellular response to nitrogen starvation |
| A | 0008429 | molecular_function | phosphatidylethanolamine binding |
| A | 0030659 | cellular_component | cytoplasmic vesicle membrane |
| A | 0030957 | molecular_function | Tat protein binding |
| A | 0031410 | cellular_component | cytoplasmic vesicle |
| A | 0031625 | molecular_function | ubiquitin protein ligase binding |
| A | 0048487 | molecular_function | beta-tubulin binding |
| A | 0050811 | molecular_function | GABA receptor binding |
| A | 0061723 | biological_process | glycophagy |
| A | 0097352 | biological_process | autophagosome maturation |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Propeptide: {"description":"Removed in mature form","featureId":"PRO_0000420208","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Site: {"description":"(Microbial infection) Cleavage; by RavZ","evidences":[{"source":"PubMed","id":"23112293","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Site: {"description":"Cleavage; by ATG4B","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Lipidation: {"description":"Phosphatidylserine amidated glycine; alternate","evidences":[{"source":"PubMed","id":"33909989","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
