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8WI7

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
10003735molecular_functionstructural constituent of ribosome
10005840cellular_componentribosome
10006412biological_processtranslation
11990904cellular_componentribonucleoprotein complex
20003735molecular_functionstructural constituent of ribosome
20005840cellular_componentribosome
20006412biological_processtranslation
20022625cellular_componentcytosolic large ribosomal subunit
21990904cellular_componentribonucleoprotein complex
30003735molecular_functionstructural constituent of ribosome
30005840cellular_componentribosome
30006412biological_processtranslation
30015934cellular_componentlarge ribosomal subunit
30022625cellular_componentcytosolic large ribosomal subunit
31990904cellular_componentribonucleoprotein complex
40003735molecular_functionstructural constituent of ribosome
40005840cellular_componentribosome
40006412biological_processtranslation
40019843molecular_functionrRNA binding
40046872molecular_functionmetal ion binding
41990904cellular_componentribonucleoprotein complex
50003735molecular_functionstructural constituent of ribosome
50005840cellular_componentribosome
50006412biological_processtranslation
50015934cellular_componentlarge ribosomal subunit
51990904cellular_componentribonucleoprotein complex
60003735molecular_functionstructural constituent of ribosome
60005737cellular_componentcytoplasm
60005840cellular_componentribosome
60006412biological_processtranslation
61990904cellular_componentribonucleoprotein complex
70003735molecular_functionstructural constituent of ribosome
70005840cellular_componentribosome
70006412biological_processtranslation
71990904cellular_componentribonucleoprotein complex
80003735molecular_functionstructural constituent of ribosome
80005840cellular_componentribosome
80006412biological_processtranslation
80022625cellular_componentcytosolic large ribosomal subunit
81990904cellular_componentribonucleoprotein complex
E0002181biological_processcytoplasmic translation
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0015934cellular_componentlarge ribosomal subunit
E0016740molecular_functiontransferase activity
E0019843molecular_functionrRNA binding
E0022625cellular_componentcytosolic large ribosomal subunit
E1990904cellular_componentribonucleoprotein complex
F0003735molecular_functionstructural constituent of ribosome
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F0022625cellular_componentcytosolic large ribosomal subunit
F1990904cellular_componentribonucleoprotein complex
G0003735molecular_functionstructural constituent of ribosome
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0019843molecular_functionrRNA binding
G1990904cellular_componentribonucleoprotein complex
H0000049molecular_functiontRNA binding
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0019843molecular_functionrRNA binding
H0022625cellular_componentcytosolic large ribosomal subunit
H1990904cellular_componentribonucleoprotein complex
I0002181biological_processcytoplasmic translation
I0003735molecular_functionstructural constituent of ribosome
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0019843molecular_functionrRNA binding
I0022625cellular_componentcytosolic large ribosomal subunit
I1990904cellular_componentribonucleoprotein complex
J0003735molecular_functionstructural constituent of ribosome
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0019843molecular_functionrRNA binding
J0022625cellular_componentcytosolic large ribosomal subunit
J1990904cellular_componentribonucleoprotein complex
M0003729molecular_functionmRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005737cellular_componentcytoplasm
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0017148biological_processnegative regulation of translation
M0022625cellular_componentcytosolic large ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0003735molecular_functionstructural constituent of ribosome
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0015934cellular_componentlarge ribosomal subunit
N0019843molecular_functionrRNA binding
N0022625cellular_componentcytosolic large ribosomal subunit
N0070180molecular_functionlarge ribosomal subunit rRNA binding
N1990904cellular_componentribonucleoprotein complex
O0003735molecular_functionstructural constituent of ribosome
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0015934cellular_componentlarge ribosomal subunit
O0019843molecular_functionrRNA binding
O1990904cellular_componentribonucleoprotein complex
Q0003735molecular_functionstructural constituent of ribosome
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0022625cellular_componentcytosolic large ribosomal subunit
Q1990904cellular_componentribonucleoprotein complex
R0003735molecular_functionstructural constituent of ribosome
R0005737cellular_componentcytoplasm
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0008097molecular_function5S rRNA binding
R0019843molecular_functionrRNA binding
R0022625cellular_componentcytosolic large ribosomal subunit
R1990904cellular_componentribonucleoprotein complex
S0003735molecular_functionstructural constituent of ribosome
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0022625cellular_componentcytosolic large ribosomal subunit
S1990904cellular_componentribonucleoprotein complex
T0000027biological_processribosomal large subunit assembly
T0003735molecular_functionstructural constituent of ribosome
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0019843molecular_functionrRNA binding
T0022625cellular_componentcytosolic large ribosomal subunit
T1990904cellular_componentribonucleoprotein complex
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005737cellular_componentcytoplasm
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0019843molecular_functionrRNA binding
U1990904cellular_componentribonucleoprotein complex
V0003735molecular_functionstructural constituent of ribosome
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0015934cellular_componentlarge ribosomal subunit
V0019843molecular_functionrRNA binding
V0022625cellular_componentcytosolic large ribosomal subunit
V1990904cellular_componentribonucleoprotein complex
W0000027biological_processribosomal large subunit assembly
W0003735molecular_functionstructural constituent of ribosome
W0005840cellular_componentribosome
W0006412biological_processtranslation
W0019843molecular_functionrRNA binding
W0022625cellular_componentcytosolic large ribosomal subunit
W1990904cellular_componentribonucleoprotein complex
X0003723molecular_functionRNA binding
X0003735molecular_functionstructural constituent of ribosome
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0019843molecular_functionrRNA binding
X1990904cellular_componentribonucleoprotein complex
Z0003735molecular_functionstructural constituent of ribosome
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0022625cellular_componentcytosolic large ribosomal subunit
Z1990904cellular_componentribonucleoprotein complex
b0003676molecular_functionnucleic acid binding
b0003723molecular_functionRNA binding
b0003729molecular_functionmRNA binding
b0003735molecular_functionstructural constituent of ribosome
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0016779molecular_functionnucleotidyltransferase activity
b0022627cellular_componentcytosolic small ribosomal subunit
b1990904cellular_componentribonucleoprotein complex
c0003735molecular_functionstructural constituent of ribosome
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0015935cellular_componentsmall ribosomal subunit
c0022627cellular_componentcytosolic small ribosomal subunit
c1990904cellular_componentribonucleoprotein complex
d0003676molecular_functionnucleic acid binding
d0003723molecular_functionRNA binding
d0003729molecular_functionmRNA binding
d0003735molecular_functionstructural constituent of ribosome
d0005840cellular_componentribosome
d0006412biological_processtranslation
d0019843molecular_functionrRNA binding
d0022627cellular_componentcytosolic small ribosomal subunit
d1990904cellular_componentribonucleoprotein complex
e0003723molecular_functionRNA binding
e0003735molecular_functionstructural constituent of ribosome
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0015935cellular_componentsmall ribosomal subunit
e0019843molecular_functionrRNA binding
e0042274biological_processribosomal small subunit biogenesis
e1990904cellular_componentribonucleoprotein complex
f0003723molecular_functionRNA binding
f0003735molecular_functionstructural constituent of ribosome
f0005737cellular_componentcytoplasm
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0015935cellular_componentsmall ribosomal subunit
f0019843molecular_functionrRNA binding
f1990904cellular_componentribonucleoprotein complex
g0003735molecular_functionstructural constituent of ribosome
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0019843molecular_functionrRNA binding
h0000028biological_processribosomal small subunit assembly
h0000049molecular_functiontRNA binding
h0003723molecular_functionRNA binding
h0003729molecular_functionmRNA binding
h0003735molecular_functionstructural constituent of ribosome
h0005840cellular_componentribosome
h0006412biological_processtranslation
h0015935cellular_componentsmall ribosomal subunit
h0019843molecular_functionrRNA binding
h0022627cellular_componentcytosolic small ribosomal subunit
h1990904cellular_componentribonucleoprotein complex
i0003735molecular_functionstructural constituent of ribosome
i0005737cellular_componentcytoplasm
i0005840cellular_componentribosome
i0006412biological_processtranslation
i0019843molecular_functionrRNA binding
i0022627cellular_componentcytosolic small ribosomal subunit
i1990904cellular_componentribonucleoprotein complex
j0003723molecular_functionRNA binding
j0003735molecular_functionstructural constituent of ribosome
j0005840cellular_componentribosome
j0006412biological_processtranslation
j1990904cellular_componentribonucleoprotein complex
k0000049molecular_functiontRNA binding
k0003723molecular_functionRNA binding
k0003735molecular_functionstructural constituent of ribosome
k0005840cellular_componentribosome
k0006412biological_processtranslation
k0015935cellular_componentsmall ribosomal subunit
k1990904cellular_componentribonucleoprotein complex
l0003735molecular_functionstructural constituent of ribosome
l0005840cellular_componentribosome
l0006412biological_processtranslation
l0019843molecular_functionrRNA binding
l0022627cellular_componentcytosolic small ribosomal subunit
l1990904cellular_componentribonucleoprotein complex
m0000049molecular_functiontRNA binding
m0003735molecular_functionstructural constituent of ribosome
m0005840cellular_componentribosome
m0006412biological_processtranslation
m0015935cellular_componentsmall ribosomal subunit
m0019843molecular_functionrRNA binding
m1990904cellular_componentribonucleoprotein complex
n0000049molecular_functiontRNA binding
n0003676molecular_functionnucleic acid binding
n0003723molecular_functionRNA binding
n0003735molecular_functionstructural constituent of ribosome
n0005829cellular_componentcytosol
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0015935cellular_componentsmall ribosomal subunit
n0019843molecular_functionrRNA binding
n1990904cellular_componentribonucleoprotein complex
o0003735molecular_functionstructural constituent of ribosome
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0015935cellular_componentsmall ribosomal subunit
o0019843molecular_functionrRNA binding
o1990904cellular_componentribonucleoprotein complex
p0003735molecular_functionstructural constituent of ribosome
p0005737cellular_componentcytoplasm
p0005840cellular_componentribosome
p0006412biological_processtranslation
p0019843molecular_functionrRNA binding
p0022627cellular_componentcytosolic small ribosomal subunit
p1990904cellular_componentribonucleoprotein complex
q0003735molecular_functionstructural constituent of ribosome
q0005737cellular_componentcytoplasm
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0015935cellular_componentsmall ribosomal subunit
q1990904cellular_componentribonucleoprotein complex
r0003735molecular_functionstructural constituent of ribosome
r0005840cellular_componentribosome
r0006412biological_processtranslation
r0019843molecular_functionrRNA binding
r0022627cellular_componentcytosolic small ribosomal subunit
r1990904cellular_componentribonucleoprotein complex
s0003735molecular_functionstructural constituent of ribosome
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0019843molecular_functionrRNA binding
s0070181molecular_functionsmall ribosomal subunit rRNA binding
s1990904cellular_componentribonucleoprotein complex
t0000028biological_processribosomal small subunit assembly
t0003723molecular_functionRNA binding
t0003735molecular_functionstructural constituent of ribosome
t0005737cellular_componentcytoplasm
t0005840cellular_componentribosome
t0006412biological_processtranslation
t0015935cellular_componentsmall ribosomal subunit
t0019843molecular_functionrRNA binding
t0022627cellular_componentcytosolic small ribosomal subunit
t1990904cellular_componentribonucleoprotein complex
u0003723molecular_functionRNA binding
u0003735molecular_functionstructural constituent of ribosome
u0005829cellular_componentcytosol
u0005840cellular_componentribosome
u0006412biological_processtranslation
u0015935cellular_componentsmall ribosomal subunit
u0019843molecular_functionrRNA binding
u0070181molecular_functionsmall ribosomal subunit rRNA binding
u1990904cellular_componentribonucleoprotein complex
w0006417biological_processregulation of translation
w0022627cellular_componentcytosolic small ribosomal subunit
w0043024molecular_functionribosomal small subunit binding
w0044238biological_processprimary metabolic process
w0045900biological_processnegative regulation of translational elongation
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtvkerrra.DGsyikFdeNaaVI
ChainResidueDetails
NALA60-ILE86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KRAIVKLAagskpidL
ChainResidueDetails
WLYS80-LEU95

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SqLvtqLVnkvlleGKKslaerIVygA
ChainResidueDetails
hSER20-ALA46

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GvaIISTSsGLLtdrqAA
ChainResidueDetails
iGLY102-ALA119

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrSLqaA.GLeVgtisDvTPqPHN
ChainResidueDetails
lILE106-ASN128

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
mLYS43-ARG50

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDrVsLmEtRPLS
ChainResidueDetails
rGLY71-SER83

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.TalLrtYISEr.GKIrarRV
ChainResidueDetails
sILE30-VAL53

site_idPS00211
Number of Residues15
DetailsABC_TRANSPORTER_1 ABC transporters family signature. IAVGEARKLGIPVIA
ChainResidueDetails
cILE171-ALA185

site_idPS00216
Number of Residues18
DetailsSUGAR_TRANSPORT_1 Sugar transport proteins signature 1. TVDKVDIWGRRrlayeiA
ChainResidueDetails
gTHR36-ALA53

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. DGRkhvpvfVteamVGhkLGEFapT
ChainResidueDetails
tASP53-THR77

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGpsGQagAlrlAiARAL
ChainResidueDetails
jGLY89-LEU107

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. VtrtGAsvvGPVpLPT
ChainResidueDetails
kVAL29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LteHLkvhKhDhhSrrgLllLvgrrrrLlkY
ChainResidueDetails
pLEU39-TYR69

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriRpRAqGRafrirkrtSHITViV
ChainResidueDetails
VLYS90-VAL114

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVVmNPvD
ChainResidueDetails
EPRO219-ASP230

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FsdgayvDvtGtSkGKGfaGtmkR
ChainResidueDetails
FPHE106-ARG129

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGdGkLtvk..VdVtankFSgsAreaItaaG
ChainResidueDetails
OLYS111-GLY141

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PDpYKGKGV
ChainResidueDetails
IPRO155-VAL163

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. SRsefyreGrVplHt..LradIDyglyeakTtfGriG
ChainResidueDetails
dSER163-GLY197

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. NNRRLRtVRQEIARV
ChainResidueDetails
2ASN43-VAL57

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YiTkKNrrndPdrLEikKFC
ChainResidueDetails
6TYR23-CYS42

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfsFtAlvIVGDgk.GmVGvGygkak.EVpa.AI
ChainResidueDetails
fGLY53-ILE85

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRaglArTrrmARqLV
ChainResidueDetails
eLEU89-VAL113

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. SLrtLgLkKirQsVvrednaqtrgLIntVhhLV
ChainResidueDetails
3SER22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. QGlRHrrGlpVRGQ
ChainResidueDetails
nGLN88-GLN101

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GaaGdtveVkdGYgrNYLlprglAivaS
ChainResidueDetails
JGLY13-SER40

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VkIKLTRLGK
ChainResidueDetails
qVAL3-LYS12

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpnnrrRarvh.GFrlR
ChainResidueDetails
7LYS5-ARG24

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GeILvRQRGthfhpG
ChainResidueDetails
ZGLY34-GLY48

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTHsGAsKRFrrtgtgkivrqkanr.RH
ChainResidueDetails
8LYS5-HIS31

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KgefRkLWISRINaaaR
ChainResidueDetails
TLYS54-ARG70

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkQLLDSGAHFG
ChainResidueDetails
cMET6-GLY17

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VlTrGDVR.RAKLYYLR
ChainResidueDetails
SVAL85-ARG100

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRRLAYeIA
ChainResidueDetails
gGLY44-ALA53

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVIsGkdKGak.GkV
ChainResidueDetails
XGLY6-VAL23

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. EVcsqcHPFYTgkqkildsg....GR
ChainResidueDetails
4GLU36-ARG57

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTepKaRalrpyaEkLIThAK
ChainResidueDetails
QILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. IrihKfknKTgyhkrqGHRQqlT
ChainResidueDetails
UILE73-THR95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsCROSSLNK: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup) => ECO:0000269|PubMed:20094657
ChainResidueDetails
gLYS39
4CYS18
4CYS38
4CYS41

226707

PDB entries from 2024-10-30

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