8V2K
Proteus vulgaris tryptophan indole-lyase complexed with L-alanine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006520 | biological_process | amino acid metabolic process |
A | 0006568 | biological_process | tryptophan metabolic process |
A | 0006569 | biological_process | tryptophan catabolic process |
A | 0009034 | molecular_function | tryptophanase activity |
A | 0009072 | biological_process | aromatic amino acid metabolic process |
A | 0016829 | molecular_function | lyase activity |
A | 0016830 | molecular_function | carbon-carbon lyase activity |
B | 0006520 | biological_process | amino acid metabolic process |
B | 0006568 | biological_process | tryptophan metabolic process |
B | 0006569 | biological_process | tryptophan catabolic process |
B | 0009034 | molecular_function | tryptophanase activity |
B | 0009072 | biological_process | aromatic amino acid metabolic process |
B | 0016829 | molecular_function | lyase activity |
B | 0016830 | molecular_function | carbon-carbon lyase activity |
C | 0006520 | biological_process | amino acid metabolic process |
C | 0006568 | biological_process | tryptophan metabolic process |
C | 0006569 | biological_process | tryptophan catabolic process |
C | 0009034 | molecular_function | tryptophanase activity |
C | 0009072 | biological_process | aromatic amino acid metabolic process |
C | 0016829 | molecular_function | lyase activity |
C | 0016830 | molecular_function | carbon-carbon lyase activity |
D | 0006520 | biological_process | amino acid metabolic process |
D | 0006568 | biological_process | tryptophan metabolic process |
D | 0006569 | biological_process | tryptophan catabolic process |
D | 0009034 | molecular_function | tryptophanase activity |
D | 0009072 | biological_process | aromatic amino acid metabolic process |
D | 0016829 | molecular_function | lyase activity |
D | 0016830 | molecular_function | carbon-carbon lyase activity |
Functional Information from PROSITE/UniProt
site_id | PS00853 |
Number of Residues | 19 |
Details | BETA_ELIM_LYASE Beta-eliminating lyases pyridoxal-phosphate attachment site. YaDaltMSAKKDpLLnIGG |
Chain | Residue | Details |
A | TYR256-GLY274 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine |
Chain | Residue | Details |
A | LYS266 | |
B | LYS266 | |
C | LYS266 | |
D | LYS266 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 7 |
Details | M-CSA 410 |
Chain | Residue | Details |
A | TYR72 | proton shuttle (general acid/base) |
A | PHE132 | steric role |
A | ASP133 | electrostatic stabiliser, proton shuttle (general acid/base) |
A | ASP223 | electrostatic stabiliser |
A | ALA225 | steric role |
A | LYS266 | covalent catalysis, proton shuttle (general acid/base) |
A | HIS458 | activator, electrostatic stabiliser |
site_id | MCSA2 |
Number of Residues | 7 |
Details | M-CSA 410 |
Chain | Residue | Details |
B | TYR72 | proton shuttle (general acid/base) |
B | PHE132 | steric role |
B | ASP133 | electrostatic stabiliser, proton shuttle (general acid/base) |
B | ASP223 | electrostatic stabiliser |
B | ALA225 | steric role |
B | LYS266 | covalent catalysis, proton shuttle (general acid/base) |
B | HIS458 | activator, electrostatic stabiliser |
site_id | MCSA3 |
Number of Residues | 7 |
Details | M-CSA 410 |
Chain | Residue | Details |
C | TYR72 | proton shuttle (general acid/base) |
C | PHE132 | steric role |
C | ASP133 | electrostatic stabiliser, proton shuttle (general acid/base) |
C | ASP223 | electrostatic stabiliser |
C | ALA225 | steric role |
C | LYS266 | covalent catalysis, proton shuttle (general acid/base) |
C | HIS458 | activator, electrostatic stabiliser |
site_id | MCSA4 |
Number of Residues | 7 |
Details | M-CSA 410 |
Chain | Residue | Details |
D | TYR72 | proton shuttle (general acid/base) |
D | PHE132 | steric role |
D | ASP133 | electrostatic stabiliser, proton shuttle (general acid/base) |
D | ASP223 | electrostatic stabiliser |
D | ALA225 | steric role |
D | LYS266 | covalent catalysis, proton shuttle (general acid/base) |
D | HIS458 | activator, electrostatic stabiliser |