Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8USD

Rpn1/Nub1UBL-focused alignment of the non-substrate-engaged human 26S proteasome

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000502cellular_componentproteasome complex
A0000932cellular_componentP-body
A0001649biological_processosteoblast differentiation
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006511biological_processubiquitin-dependent protein catabolic process
A0006979biological_processresponse to oxidative stress
A0008021cellular_componentsynaptic vesicle
A0008540cellular_componentproteasome regulatory particle, base subcomplex
A0010498biological_processproteasomal protein catabolic process
A0016020cellular_componentmembrane
A0016887molecular_functionATP hydrolysis activity
A0022624cellular_componentproteasome accessory complex
A0034774cellular_componentsecretory granule lumen
A0036402molecular_functionproteasome-activating activity
A0036464cellular_componentcytoplasmic ribonucleoprotein granule
A0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
A0061136biological_processregulation of proteasomal protein catabolic process
A0071357biological_processcellular response to type I interferon
A1901800biological_processpositive regulation of proteasomal protein catabolic process
A1904813cellular_componentficolin-1-rich granule lumen
B0000166molecular_functionnucleotide binding
B0000502cellular_componentproteasome complex
B0003723molecular_functionRNA binding
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005838cellular_componentproteasome regulatory particle
B0006979biological_processresponse to oxidative stress
B0008021cellular_componentsynaptic vesicle
B0008540cellular_componentproteasome regulatory particle, base subcomplex
B0010498biological_processproteasomal protein catabolic process
B0016020cellular_componentmembrane
B0016887molecular_functionATP hydrolysis activity
B0022624cellular_componentproteasome accessory complex
B0036402molecular_functionproteasome-activating activity
B0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
B0061136biological_processregulation of proteasomal protein catabolic process
B0071357biological_processcellular response to type I interferon
f0000502cellular_componentproteasome complex
f0005515molecular_functionprotein binding
f0005576cellular_componentextracellular region
f0005634cellular_componentnucleus
f0005654cellular_componentnucleoplasm
f0005829cellular_componentcytosol
f0005838cellular_componentproteasome regulatory particle
f0006979biological_processresponse to oxidative stress
f0008021cellular_componentsynaptic vesicle
f0008540cellular_componentproteasome regulatory particle, base subcomplex
f0010498biological_processproteasomal protein catabolic process
f0016020cellular_componentmembrane
f0022624cellular_componentproteasome accessory complex
f0030234molecular_functionenzyme regulator activity
f0034515cellular_componentproteasome storage granule
f0034774cellular_componentsecretory granule lumen
f0042176biological_processregulation of protein catabolic process
f0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
f0061136biological_processregulation of proteasomal protein catabolic process
f0070062cellular_componentextracellular exosome
f0071357biological_processcellular response to type I interferon
f1904813cellular_componentficolin-1-rich granule lumen
U0000502cellular_componentproteasome complex
U0005515molecular_functionprotein binding
U0005576cellular_componentextracellular region
U0005634cellular_componentnucleus
U0005654cellular_componentnucleoplasm
U0005829cellular_componentcytosol
U0005838cellular_componentproteasome regulatory particle
U0006979biological_processresponse to oxidative stress
U0008021cellular_componentsynaptic vesicle
U0008540cellular_componentproteasome regulatory particle, base subcomplex
U0010498biological_processproteasomal protein catabolic process
U0016020cellular_componentmembrane
U0022624cellular_componentproteasome accessory complex
U0030234molecular_functionenzyme regulator activity
U0031625molecular_functionubiquitin protein ligase binding
U0034515cellular_componentproteasome storage granule
U0035578cellular_componentazurophil granule lumen
U0042176biological_processregulation of protein catabolic process
U0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
U0061136biological_processregulation of proteasomal protein catabolic process
U0071357biological_processcellular response to type I interferon
Functional Information from PROSITE/UniProt
site_idPS00674
Number of Residues19
DetailsAAA AAA-protein family signature. VkVImATNrietLDpALi.R
ChainResidueDetails
BVAL325-ARG343
AILE315-ARG333

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues33
DetailsRepeat: {"description":"PC 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues36
DetailsRepeat: {"description":"PC 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues34
DetailsRepeat: {"description":"PC 3"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues34
DetailsRepeat: {"description":"PC 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues29
DetailsRepeat: {"description":"PC 5"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues31
DetailsRepeat: {"description":"PC 6"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues15
DetailsRepeat: {"description":"PC 7"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues195
DetailsRegion: {"description":"Required for interaction with UBLCP1","evidences":[{"source":"PubMed","id":"28539385","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"17323924","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q8VDM4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon