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8TBA

Crystal structure of Helicobacter pylori glutamate racemase bound to D-glutamate and a crystallographic artifact

Functional Information from GO Data
ChainGOidnamespacecontents
A0008360biological_processregulation of cell shape
A0008881molecular_functionglutamate racemase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016853molecular_functionisomerase activity
A0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
A0047661molecular_functionamino-acid racemase activity
A0071555biological_processcell wall organization
B0008360biological_processregulation of cell shape
B0008881molecular_functionglutamate racemase activity
B0009252biological_processpeptidoglycan biosynthetic process
B0016853molecular_functionisomerase activity
B0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
B0047661molecular_functionamino-acid racemase activity
B0071555biological_processcell wall organization
Functional Information from PROSITE/UniProt
site_idPS00923
Number of Residues9
DetailsASP_GLU_RACEMASE_1 Aspartate and glutamate racemases signature 1. IVaC.NTASA
ChainResidueDetails
AILE67-ALA75

site_idPS00924
Number of Residues11
DetailsASP_GLU_RACEMASE_2 Aspartate and glutamate racemases signature 2. IIlGCTHFPlI
ChainResidueDetails
AILE177-ILE187

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"UniProtKB","id":"O58403","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17568739","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19097892","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22877632","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2JFX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JFY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JFZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2W4I","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4B1F","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

250359

PDB entries from 2026-03-11

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