| Chain | GOid | namespace | contents |
| A | 0000785 | cellular_component | chromatin |
| A | 0000978 | molecular_function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| A | 0000981 | molecular_function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| A | 0001932 | biological_process | regulation of protein phosphorylation |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| A | 0006952 | biological_process | defense response |
| A | 0007165 | biological_process | signal transduction |
| A | 0007259 | biological_process | cell surface receptor signaling pathway via JAK-STAT |
| A | 0042127 | biological_process | regulation of cell population proliferation |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0043434 | biological_process | response to peptide hormone |
| A | 0044389 | molecular_function | ubiquitin-like protein ligase binding |
| A | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| A | 0051607 | biological_process | defense response to virus |
| A | 0060337 | biological_process | type I interferon-mediated signaling pathway |
| A | 0060339 | biological_process | negative regulation of type I interferon-mediated signaling pathway |
| A | 0070721 | cellular_component | ISGF3 complex |
| A | 0090140 | biological_process | regulation of mitochondrial fission |
| A | 0090575 | cellular_component | RNA polymerase II transcription regulator complex |
| B | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| B | 0004482 | molecular_function | mRNA 5'-cap (guanine-N7-)-methyltransferase activity |
| B | 0004483 | molecular_function | mRNA (nucleoside-2'-O-)-methyltransferase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0032259 | biological_process | methylation |
| B | 0039694 | biological_process | viral RNA genome replication |
