8RT4

O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0005886	cellular_component	plasma membrane
A	0009279	cellular_component	cell outer membrane
b	0005515	molecular_function	protein binding
b	0005886	cellular_component	plasma membrane
b	0009279	cellular_component	cell outer membrane
D	0005515	molecular_function	protein binding
D	0005886	cellular_component	plasma membrane
D	0009279	cellular_component	cell outer membrane
e	0005515	molecular_function	protein binding
e	0005886	cellular_component	plasma membrane
e	0009279	cellular_component	cell outer membrane
G	0005515	molecular_function	protein binding
G	0005886	cellular_component	plasma membrane
G	0009279	cellular_component	cell outer membrane
h	0005515	molecular_function	protein binding
h	0005886	cellular_component	plasma membrane
h	0009279	cellular_component	cell outer membrane
J	0005515	molecular_function	protein binding
J	0005886	cellular_component	plasma membrane
J	0009279	cellular_component	cell outer membrane
k	0005515	molecular_function	protein binding
k	0005886	cellular_component	plasma membrane
k	0009279	cellular_component	cell outer membrane
M	0005515	molecular_function	protein binding
M	0005886	cellular_component	plasma membrane
M	0009279	cellular_component	cell outer membrane
n	0005515	molecular_function	protein binding
n	0005886	cellular_component	plasma membrane
n	0009279	cellular_component	cell outer membrane
P	0005515	molecular_function	protein binding
P	0005886	cellular_component	plasma membrane
P	0009279	cellular_component	cell outer membrane
S	0005515	molecular_function	protein binding
S	0005886	cellular_component	plasma membrane
S	0009279	cellular_component	cell outer membrane
V	0005515	molecular_function	protein binding
V	0005886	cellular_component	plasma membrane
V	0009279	cellular_component	cell outer membrane
Y	0005515	molecular_function	protein binding
Y	0005886	cellular_component	plasma membrane
Y	0009279	cellular_component	cell outer membrane

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	476
Details	Topological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"23735543","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"38886579","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1806
Details	Region: {"description":"O-layer first part","evidences":[{"source":"PubMed","id":"38886579","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	476
Details	Region: {"description":"O-layer second part","evidences":[{"source":"PubMed","id":"38886579","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	14
Details	Lipidation: {"description":"S-diacylglycerol cysteine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00303","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---