8RQ0
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Functional Information from PROSITE/UniProt
| site_id | PS00049 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL |
| Chain | Residue | Details |
| K | ALA60-LEU86 |
| site_id | PS00358 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS |
| Chain | Residue | Details |
| F | LEU56-SER72 |
| site_id | PS00430 |
| Number of Residues | 66 |
| Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK |
| Chain | Residue | Details |
| T | MET1-LYS66 |
| site_id | PS00464 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV |
| Chain | Residue | Details |
| S | LYS83-VAL107 |
| site_id | PS00467 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD |
| Chain | Residue | Details |
| C | PRO217-ASP228 |
| site_id | PS00474 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR |
| Chain | Residue | Details |
| D | PHE101-ARG124 |
| site_id | PS00475 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG |
| Chain | Residue | Details |
| L | LYS109-GLY139 |
| site_id | PS00525 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV |
| Chain | Residue | Details |
| G | PRO153-VAL161 |
| site_id | PS00579 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV |
| Chain | Residue | Details |
| Y | GLN39-VAL53 |
| site_id | PS00582 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD |
| Chain | Residue | Details |
| 1 | TYR20-ASP39 |
| site_id | PS00586 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP |
| Chain | Residue | Details |
| M | LYS58-PRO69 |
| site_id | PS00634 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV |
| Chain | Residue | Details |
| Z | THR22-VAL54 |
| site_id | PS00651 |
| Number of Residues | 28 |
| Details | RIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT |
| Chain | Residue | Details |
| H | GLY13-THR40 |
| site_id | PS00701 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW |
| Chain | Residue | Details |
| M | ARG81-TRP92 |
| site_id | PS00783 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG |
| Chain | Residue | Details |
| J | VAL105-GLY127 |
| site_id | PS00784 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR |
| Chain | Residue | Details |
| 2 | LYS2-ARG21 |
| site_id | PS00828 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ |
| Chain | Residue | Details |
| 4 | CYS11-GLN37 |
| site_id | PS00831 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG |
| Chain | Residue | Details |
| W | GLY30-GLY44 |
| site_id | PS00936 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH |
| Chain | Residue | Details |
| 3 | LYS4-HIS30 |
| site_id | PS00937 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR |
| Chain | Residue | Details |
| Q | LYS53-ARG69 |
| site_id | PS01015 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR |
| Chain | Residue | Details |
| P | VAL85-ARG100 |
| site_id | PS01108 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV |
| Chain | Residue | Details |
| U | ASP7-VAL24 |
| site_id | PS01143 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR |
| Chain | Residue | Details |
| 6 | ASP35-ARG56 |
| site_id | PS01167 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK |
| Chain | Residue | Details |
| N | ILE34-LYS56 |
| site_id | PS01169 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT |
| Chain | Residue | Details |
| R | VAL72-THR94 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842 |
| Chain | Residue | Details |
| C | LYS241 | |
| H | LYS83 | |
| H | LYS112 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842 |
| Chain | Residue | Details |
| 6 | LYS8 |
