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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8P8M

Yeast 60S ribosomal subunit, RPL39 deletion

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
JT0002181biological_processcytoplasmic translation
JT0003723molecular_functionRNA binding
JT0003735molecular_functionstructural constituent of ribosome
JT0005737cellular_componentcytoplasm
JT0005829cellular_componentcytosol
JT0005840cellular_componentribosome
JT0006412biological_processtranslation
JT0022625cellular_componentcytosolic large ribosomal subunit
JT1990904cellular_componentribonucleoprotein complex
JU0000027biological_processribosomal large subunit assembly
JU0000470biological_processmaturation of LSU-rRNA
JU0002181biological_processcytoplasmic translation
JU0003723molecular_functionRNA binding
JU0003735molecular_functionstructural constituent of ribosome
JU0005730cellular_componentnucleolus
JU0005737cellular_componentcytoplasm
JU0005829cellular_componentcytosol
JU0005840cellular_componentribosome
JU0006412biological_processtranslation
JU0016236biological_processmacroautophagy
JU0022625cellular_componentcytosolic large ribosomal subunit
JU0032991cellular_componentprotein-containing complex
JU0042273biological_processribosomal large subunit biogenesis
JU1990904cellular_componentribonucleoprotein complex
JV0000470biological_processmaturation of LSU-rRNA
JV0002181biological_processcytoplasmic translation
JV0003723molecular_functionRNA binding
JV0003735molecular_functionstructural constituent of ribosome
JV0005737cellular_componentcytoplasm
JV0005829cellular_componentcytosol
JV0005840cellular_componentribosome
JV0006412biological_processtranslation
JV0022625cellular_componentcytosolic large ribosomal subunit
JV0180023biological_processcytosolic large ribosomal subunit assembly
JV1990904cellular_componentribonucleoprotein complex
JW0000470biological_processmaturation of LSU-rRNA
JW0002181biological_processcytoplasmic translation
JW0003723molecular_functionRNA binding
JW0003729molecular_functionmRNA binding
JW0003735molecular_functionstructural constituent of ribosome
JW0005730cellular_componentnucleolus
JW0005737cellular_componentcytoplasm
JW0005829cellular_componentcytosol
JW0005840cellular_componentribosome
JW0006412biological_processtranslation
JW0015934cellular_componentlarge ribosomal subunit
JW0017148biological_processnegative regulation of translation
JW0022625cellular_componentcytosolic large ribosomal subunit
JW1990904cellular_componentribonucleoprotein complex
LF0002181biological_processcytoplasmic translation
LF0003723molecular_functionRNA binding
LF0003735molecular_functionstructural constituent of ribosome
LF0005737cellular_componentcytoplasm
LF0005829cellular_componentcytosol
LF0005840cellular_componentribosome
LF0006412biological_processtranslation
LF0019843molecular_functionrRNA binding
LF0022625cellular_componentcytosolic large ribosomal subunit
LF0042273biological_processribosomal large subunit biogenesis
LF1990145biological_processmaintenance of translational fidelity
LF1990904cellular_componentribonucleoprotein complex
LG0000027biological_processribosomal large subunit assembly
LG0002181biological_processcytoplasmic translation
LG0003723molecular_functionRNA binding
LG0003735molecular_functionstructural constituent of ribosome
LG0005515molecular_functionprotein binding
LG0005737cellular_componentcytoplasm
LG0005829cellular_componentcytosol
LG0005840cellular_componentribosome
LG0006364biological_processrRNA processing
LG0006412biological_processtranslation
LG0006414biological_processtranslational elongation
LG0022625cellular_componentcytosolic large ribosomal subunit
LG1990145biological_processmaintenance of translational fidelity
LG1990904cellular_componentribonucleoprotein complex
LH0002181biological_processcytoplasmic translation
LH0003723molecular_functionRNA binding
LH0003735molecular_functionstructural constituent of ribosome
LH0005634cellular_componentnucleus
LH0005737cellular_componentcytoplasm
LH0005829cellular_componentcytosol
LH0005840cellular_componentribosome
LH0006412biological_processtranslation
LH0022625cellular_componentcytosolic large ribosomal subunit
LH1990904cellular_componentribonucleoprotein complex
LI0000027biological_processribosomal large subunit assembly
LI0002181biological_processcytoplasmic translation
LI0003723molecular_functionRNA binding
LI0003735molecular_functionstructural constituent of ribosome
LI0005515molecular_functionprotein binding
LI0005634cellular_componentnucleus
LI0005737cellular_componentcytoplasm
LI0005829cellular_componentcytosol
LI0005840cellular_componentribosome
LI0006412biological_processtranslation
LI0008097molecular_function5S rRNA binding
LI0019843molecular_functionrRNA binding
LI0022625cellular_componentcytosolic large ribosomal subunit
LI0022626cellular_componentcytosolic ribosome
LI1990904cellular_componentribonucleoprotein complex
LJ0000027biological_processribosomal large subunit assembly
LJ0002181biological_processcytoplasmic translation
LJ0003723molecular_functionRNA binding
LJ0003735molecular_functionstructural constituent of ribosome
LJ0005737cellular_componentcytoplasm
LJ0005829cellular_componentcytosol
LJ0005840cellular_componentribosome
LJ0006412biological_processtranslation
LJ0022625cellular_componentcytosolic large ribosomal subunit
LJ1990904cellular_componentribonucleoprotein complex
LK0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LK0000470biological_processmaturation of LSU-rRNA
LK0002181biological_processcytoplasmic translation
LK0003723molecular_functionRNA binding
LK0003735molecular_functionstructural constituent of ribosome
LK0005737cellular_componentcytoplasm
LK0005829cellular_componentcytosol
LK0005840cellular_componentribosome
LK0022625cellular_componentcytosolic large ribosomal subunit
LK0042273biological_processribosomal large subunit biogenesis
LK1990904cellular_componentribonucleoprotein complex
LL0000470biological_processmaturation of LSU-rRNA
LL0002181biological_processcytoplasmic translation
LL0003723molecular_functionRNA binding
LL0003735molecular_functionstructural constituent of ribosome
LL0005737cellular_componentcytoplasm
LL0005829cellular_componentcytosol
LL0005840cellular_componentribosome
LL0006364biological_processrRNA processing
LL0022625cellular_componentcytosolic large ribosomal subunit
LL0042254biological_processribosome biogenesis
LL1990904cellular_componentribonucleoprotein complex
LM0002181biological_processcytoplasmic translation
LM0003735molecular_functionstructural constituent of ribosome
LM0005515molecular_functionprotein binding
LM0005737cellular_componentcytoplasm
LM0005829cellular_componentcytosol
LM0005840cellular_componentribosome
LM0006412biological_processtranslation
LM0019843molecular_functionrRNA binding
LM0022625cellular_componentcytosolic large ribosomal subunit
LM1990904cellular_componentribonucleoprotein complex
LN0000027biological_processribosomal large subunit assembly
LN0002181biological_processcytoplasmic translation
LN0003735molecular_functionstructural constituent of ribosome
LN0005515molecular_functionprotein binding
LN0005737cellular_componentcytoplasm
LN0005829cellular_componentcytosol
LN0005840cellular_componentribosome
LN0006412biological_processtranslation
LN0006415biological_processtranslational termination
LN0022625cellular_componentcytosolic large ribosomal subunit
LN1990904cellular_componentribonucleoprotein complex
LO0000027biological_processribosomal large subunit assembly
LO0002181biological_processcytoplasmic translation
LO0003723molecular_functionRNA binding
LO0003735molecular_functionstructural constituent of ribosome
LO0005634cellular_componentnucleus
LO0005737cellular_componentcytoplasm
LO0005829cellular_componentcytosol
LO0005840cellular_componentribosome
LO0006412biological_processtranslation
LO0019843molecular_functionrRNA binding
LO0022625cellular_componentcytosolic large ribosomal subunit
LO1990904cellular_componentribonucleoprotein complex
QO0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
QO0002181biological_processcytoplasmic translation
QO0003735molecular_functionstructural constituent of ribosome
QO0005737cellular_componentcytoplasm
QO0005829cellular_componentcytosol
QO0005840cellular_componentribosome
QO0006412biological_processtranslation
QO0015934cellular_componentlarge ribosomal subunit
QO0022625cellular_componentcytosolic large ribosomal subunit
QO0030687cellular_componentpreribosome, large subunit precursor
QO1990904cellular_componentribonucleoprotein complex
QP0002181biological_processcytoplasmic translation
QP0003723molecular_functionRNA binding
QP0003735molecular_functionstructural constituent of ribosome
QP0005737cellular_componentcytoplasm
QP0005829cellular_componentcytosol
QP0005840cellular_componentribosome
QP0006412biological_processtranslation
QP0022625cellular_componentcytosolic large ribosomal subunit
QP1990904cellular_componentribonucleoprotein complex
QQ0002181biological_processcytoplasmic translation
QQ0003723molecular_functionRNA binding
QQ0003735molecular_functionstructural constituent of ribosome
QQ0005737cellular_componentcytoplasm
QQ0005829cellular_componentcytosol
QQ0005840cellular_componentribosome
QQ0006412biological_processtranslation
QQ0015934cellular_componentlarge ribosomal subunit
QQ0022625cellular_componentcytosolic large ribosomal subunit
QQ0022626cellular_componentcytosolic ribosome
QQ1990904cellular_componentribonucleoprotein complex
QS0002181biological_processcytoplasmic translation
QS0003735molecular_functionstructural constituent of ribosome
QS0005737cellular_componentcytoplasm
QS0005829cellular_componentcytosol
QS0005840cellular_componentribosome
QS0006412biological_processtranslation
QS0015934cellular_componentlarge ribosomal subunit
QS0022625cellular_componentcytosolic large ribosomal subunit
QS1990904cellular_componentribonucleoprotein complex
QT0002181biological_processcytoplasmic translation
QT0003735molecular_functionstructural constituent of ribosome
QT0005737cellular_componentcytoplasm
QT0005829cellular_componentcytosol
QT0005840cellular_componentribosome
QT0006412biological_processtranslation
QT0015934cellular_componentlarge ribosomal subunit
QT0022625cellular_componentcytosolic large ribosomal subunit
QT1990904cellular_componentribonucleoprotein complex
QU0002181biological_processcytoplasmic translation
QU0003723molecular_functionRNA binding
QU0003735molecular_functionstructural constituent of ribosome
QU0005515molecular_functionprotein binding
QU0005737cellular_componentcytoplasm
QU0005829cellular_componentcytosol
QU0005840cellular_componentribosome
QU0006412biological_processtranslation
QU0022625cellular_componentcytosolic large ribosomal subunit
QU1990904cellular_componentribonucleoprotein complex
QV0002181biological_processcytoplasmic translation
QV0003735molecular_functionstructural constituent of ribosome
QV0005737cellular_componentcytoplasm
QV0005829cellular_componentcytosol
QV0005840cellular_componentribosome
QV0006412biological_processtranslation
QV0022625cellular_componentcytosolic large ribosomal subunit
QV0070180molecular_functionlarge ribosomal subunit rRNA binding
QV1990904cellular_componentribonucleoprotein complex
QW0002181biological_processcytoplasmic translation
QW0003723molecular_functionRNA binding
QW0003729molecular_functionmRNA binding
QW0003735molecular_functionstructural constituent of ribosome
QW0005737cellular_componentcytoplasm
QW0005829cellular_componentcytosol
QW0005840cellular_componentribosome
QW0006413biological_processtranslational initiation
QW0006414biological_processtranslational elongation
QW0015934cellular_componentlarge ribosomal subunit
QW0022625cellular_componentcytosolic large ribosomal subunit
QW0022626cellular_componentcytosolic ribosome
QW1990904cellular_componentribonucleoprotein complex
QX0000027biological_processribosomal large subunit assembly
QX0002181biological_processcytoplasmic translation
QX0003723molecular_functionRNA binding
QX0003735molecular_functionstructural constituent of ribosome
QX0005515molecular_functionprotein binding
QX0005737cellular_componentcytoplasm
QX0005829cellular_componentcytosol
QX0005840cellular_componentribosome
QX0006412biological_processtranslation
QX0019843molecular_functionrRNA binding
QX0022625cellular_componentcytosolic large ribosomal subunit
QX0030687cellular_componentpreribosome, large subunit precursor
QX1990904cellular_componentribonucleoprotein complex
QY0002181biological_processcytoplasmic translation
QY0003723molecular_functionRNA binding
QY0003735molecular_functionstructural constituent of ribosome
QY0005737cellular_componentcytoplasm
QY0005829cellular_componentcytosol
QY0005840cellular_componentribosome
QY0006412biological_processtranslation
QY0015934cellular_componentlarge ribosomal subunit
QY0022625cellular_componentcytosolic large ribosomal subunit
QY0032991cellular_componentprotein-containing complex
QY0042273biological_processribosomal large subunit biogenesis
QY1990904cellular_componentribonucleoprotein complex
QZ0002181biological_processcytoplasmic translation
QZ0003735molecular_functionstructural constituent of ribosome
QZ0005737cellular_componentcytoplasm
QZ0005829cellular_componentcytosol
QZ0005840cellular_componentribosome
QZ0006412biological_processtranslation
QZ0022625cellular_componentcytosolic large ribosomal subunit
QZ1990904cellular_componentribonucleoprotein complex
RA0002181biological_processcytoplasmic translation
RA0003723molecular_functionRNA binding
RA0003735molecular_functionstructural constituent of ribosome
RA0005634cellular_componentnucleus
RA0005737cellular_componentcytoplasm
RA0005829cellular_componentcytosol
RA0005840cellular_componentribosome
RA0006412biological_processtranslation
RA0015934cellular_componentlarge ribosomal subunit
RA0022625cellular_componentcytosolic large ribosomal subunit
RA1990904cellular_componentribonucleoprotein complex
RB0002181biological_processcytoplasmic translation
RB0003735molecular_functionstructural constituent of ribosome
RB0005737cellular_componentcytoplasm
RB0005829cellular_componentcytosol
RB0005840cellular_componentribosome
RB0006412biological_processtranslation
RB0022625cellular_componentcytosolic large ribosomal subunit
RB1990904cellular_componentribonucleoprotein complex
RC0002181biological_processcytoplasmic translation
RC0003723molecular_functionRNA binding
RC0003735molecular_functionstructural constituent of ribosome
RC0005737cellular_componentcytoplasm
RC0005829cellular_componentcytosol
RC0005840cellular_componentribosome
RC0006364biological_processrRNA processing
RC0022625cellular_componentcytosolic large ribosomal subunit
RC0030627molecular_functionpre-mRNA 5'-splice site binding
RC0048025biological_processnegative regulation of mRNA splicing, via spliceosome
RC1990904cellular_componentribonucleoprotein complex
RD0002181biological_processcytoplasmic translation
RD0003735molecular_functionstructural constituent of ribosome
RD0005737cellular_componentcytoplasm
RD0005829cellular_componentcytosol
RD0005840cellular_componentribosome
RD0006412biological_processtranslation
RD0006450biological_processregulation of translational fidelity
RD0022625cellular_componentcytosolic large ribosomal subunit
RD1990904cellular_componentribonucleoprotein complex
RE0002181biological_processcytoplasmic translation
RE0003735molecular_functionstructural constituent of ribosome
RE0005737cellular_componentcytoplasm
RE0005829cellular_componentcytosol
RE0005840cellular_componentribosome
RE0006412biological_processtranslation
RE0022625cellular_componentcytosolic large ribosomal subunit
RE1990904cellular_componentribonucleoprotein complex
RF0000027biological_processribosomal large subunit assembly
RF0002181biological_processcytoplasmic translation
RF0003735molecular_functionstructural constituent of ribosome
RF0005737cellular_componentcytoplasm
RF0005829cellular_componentcytosol
RF0005840cellular_componentribosome
RF0006364biological_processrRNA processing
RF0006412biological_processtranslation
RF0022625cellular_componentcytosolic large ribosomal subunit
RF0042273biological_processribosomal large subunit biogenesis
RF1990904cellular_componentribonucleoprotein complex
RG0002181biological_processcytoplasmic translation
RG0003735molecular_functionstructural constituent of ribosome
RG0005737cellular_componentcytoplasm
RG0005829cellular_componentcytosol
RG0005840cellular_componentribosome
RG0006412biological_processtranslation
RG0022625cellular_componentcytosolic large ribosomal subunit
RG0030687cellular_componentpreribosome, large subunit precursor
RG0042254biological_processribosome biogenesis
RG1990904cellular_componentribonucleoprotein complex
RH0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RH0002181biological_processcytoplasmic translation
RH0003729molecular_functionmRNA binding
RH0003735molecular_functionstructural constituent of ribosome
RH0005737cellular_componentcytoplasm
RH0005829cellular_componentcytosol
RH0005840cellular_componentribosome
RH0006412biological_processtranslation
RH0022625cellular_componentcytosolic large ribosomal subunit
RH0030687cellular_componentpreribosome, large subunit precursor
RH1990904cellular_componentribonucleoprotein complex
RI0000470biological_processmaturation of LSU-rRNA
RI0002181biological_processcytoplasmic translation
RI0003723molecular_functionRNA binding
RI0003735molecular_functionstructural constituent of ribosome
RI0005737cellular_componentcytoplasm
RI0005829cellular_componentcytosol
RI0005840cellular_componentribosome
RI0006412biological_processtranslation
RI0022625cellular_componentcytosolic large ribosomal subunit
RI0180023biological_processcytosolic large ribosomal subunit assembly
RI1990904cellular_componentribonucleoprotein complex
RJ0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RJ0002181biological_processcytoplasmic translation
RJ0003723molecular_functionRNA binding
RJ0003735molecular_functionstructural constituent of ribosome
RJ0005515molecular_functionprotein binding
RJ0005737cellular_componentcytoplasm
RJ0005829cellular_componentcytosol
RJ0005840cellular_componentribosome
RJ0006412biological_processtranslation
RJ0008270molecular_functionzinc ion binding
RJ0019843molecular_functionrRNA binding
RJ0022625cellular_componentcytosolic large ribosomal subunit
RJ0030687cellular_componentpreribosome, large subunit precursor
RJ0046872molecular_functionmetal ion binding
RJ1990904cellular_componentribonucleoprotein complex
RM0002181biological_processcytoplasmic translation
RM0003735molecular_functionstructural constituent of ribosome
RM0005515molecular_functionprotein binding
RM0005737cellular_componentcytoplasm
RM0005829cellular_componentcytosol
RM0005840cellular_componentribosome
RM0006412biological_processtranslation
RM0022618biological_processprotein-RNA complex assembly
RM0022625cellular_componentcytosolic large ribosomal subunit
RM1990904cellular_componentribonucleoprotein complex
RO0000027biological_processribosomal large subunit assembly
RO0000055biological_processribosomal large subunit export from nucleus
RO0002181biological_processcytoplasmic translation
RO0003735molecular_functionstructural constituent of ribosome
RO0005515molecular_functionprotein binding
RO0005634cellular_componentnucleus
RO0005737cellular_componentcytoplasm
RO0005829cellular_componentcytosol
RO0005840cellular_componentribosome
RO0006412biological_processtranslation
RO0008270molecular_functionzinc ion binding
RO0016567biological_processprotein ubiquitination
RO0019941biological_processmodification-dependent protein catabolic process
RO0022625cellular_componentcytosolic large ribosomal subunit
RO0022626cellular_componentcytosolic ribosome
RO0031386molecular_functionprotein tag activity
RO0042254biological_processribosome biogenesis
RO1990904cellular_componentribonucleoprotein complex
RQ0002181biological_processcytoplasmic translation
RQ0003735molecular_functionstructural constituent of ribosome
RQ0005737cellular_componentcytoplasm
RQ0005829cellular_componentcytosol
RQ0005840cellular_componentribosome
RQ0006412biological_processtranslation
RQ0008270molecular_functionzinc ion binding
RQ0022625cellular_componentcytosolic large ribosomal subunit
RQ0044391cellular_componentribosomal subunit
RQ0046677biological_processresponse to antibiotic
RQ0046898biological_processresponse to cycloheximide
RQ1990904cellular_componentribonucleoprotein complex
RT0002181biological_processcytoplasmic translation
RT0003735molecular_functionstructural constituent of ribosome
RT0005515molecular_functionprotein binding
RT0005737cellular_componentcytoplasm
RT0005829cellular_componentcytosol
RT0005840cellular_componentribosome
RT0006412biological_processtranslation
RT0008270molecular_functionzinc ion binding
RT0022625cellular_componentcytosolic large ribosomal subunit
RT0044391cellular_componentribosomal subunit
RT0046872molecular_functionmetal ion binding
RT1990904cellular_componentribonucleoprotein complex
RV0000027biological_processribosomal large subunit assembly
RV0002181biological_processcytoplasmic translation
RV0003735molecular_functionstructural constituent of ribosome
RV0005515molecular_functionprotein binding
RV0005737cellular_componentcytoplasm
RV0005840cellular_componentribosome
RV0022625cellular_componentcytosolic large ribosomal subunit
RV0030686cellular_component90S preribosome
RV0042254biological_processribosome biogenesis
RV0070180molecular_functionlarge ribosomal subunit rRNA binding
RV1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI
ChainResidueDetails
QVALA76-ILE102
site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI
ChainResidueDetails
QXLYS120-ILE135
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ROLYS27-ASP52
site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT
ChainResidueDetails
LOLEU37-THR53
site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV
ChainResidueDetails
QOARG126-VAL150
site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
ChainResidueDetails
LFPRO197-ASP208
site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR
ChainResidueDetails
LGPHE209-ARG232
site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG
ChainResidueDetails
RALYS111-GLY142
site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP
ChainResidueDetails
QQGLN7-PRO26
site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV
ChainResidueDetails
RHSER40-VAL54
site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG
ChainResidueDetails
REPHE17-GLY37
site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV
ChainResidueDetails
LKVAL102-VAL134
site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK
ChainResidueDetails
LMGLN163-LYS184
site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII
ChainResidueDetails
RCSER20-ILE44
site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG
ChainResidueDetails
JWLEU84-GLY107
site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH
ChainResidueDetails
LHASN114-HIS140
site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG
ChainResidueDetails
RCGLU76-GLY96
site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD
ChainResidueDetails
QWPHE8-ASP25
site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG
ChainResidueDetails
RJGLY4-GLY23
site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG
ChainResidueDetails
LLCYS170-GLY187
site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG
ChainResidueDetails
JTARG70-GLY84
site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP
ChainResidueDetails
RFGLY69-PRO90
site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI
ChainResidueDetails
QPLYS50-ILE67
site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF
ChainResidueDetails
QZGLY125-PHE136
site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI
ChainResidueDetails
QYASP53-ILE70
site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG
ChainResidueDetails
RDVAL49-GLY63
site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG
ChainResidueDetails
RGTHR15-GLY28
site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K
ChainResidueDetails
LJASN72-LYS90
site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG
ChainResidueDetails
QTGLY37-GLY62
site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC
ChainResidueDetails
RQLYS63-CYS74
site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR
ChainResidueDetails
RIPRO52-ARG62
site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG
ChainResidueDetails
JVASP46-GLY69
site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV
ChainResidueDetails
LNALA108-VAL129
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P40212","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues12
DetailsMotif: {"description":"Nuclear localization signal","evidences":[{"source":"PubMed","id":"2104804","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues34
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues40
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues48
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues9
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"N-acetylalanine; partial","evidences":[{"source":"PubMed","id":"10601260","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues1
DetailsModified residue: {"description":"Pros-methylhistidine","evidences":[{"source":"PubMed","id":"20864530","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24865971","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26826131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues85
DetailsRegion: {"description":"C-terminal-extended nuclear localization signal","evidences":[{"source":"PubMed","id":"25936803","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"1544921","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues1
DetailsModified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"PubMed","id":"26046779","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues1
DetailsModified residue: {"description":"N-acetylthreonine","evidences":[{"source":"PubMed","id":"10601260","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"10601260","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues18
DetailsZinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22096102","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues1
DetailsModified residue: {"description":"N6-methyllysine; by RKM3","evidences":[{"source":"PubMed","id":"18957409","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22522802","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24517342","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI21
Number of Residues1
DetailsModified residue: {"description":"N6-methyllysine; by RKM4","evidences":[{"source":"PubMed","id":"18957409","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24517342","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI22
Number of Residues14
DetailsRepeat: {"description":"1"}
ChainResidueDetails
site_idSWS_FT_FI23
Number of Residues16
DetailsRepeat: {"description":"2"}
ChainResidueDetails
site_idSWS_FT_FI24
Number of Residues49
DetailsRegion: {"description":"2 X 15-17 AA approximate repeats"}
ChainResidueDetails
site_idSWS_FT_FI25
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI26
Number of Residues21
DetailsZinc finger: {"description":"C4-type"}
ChainResidueDetails
site_idSWS_FT_FI27
Number of Residues2
DetailsModified residue: {"description":"N6,N6,N6-trimethyllysine","evidences":[{"source":"PubMed","id":"22522802","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI28
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI29
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"Q12672","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI30
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"16096273","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI31
Number of Residues2
DetailsModified residue: {"description":"N6,N6-dimethyllysine; by RKM1","evidences":[{"source":"PubMed","id":"17327221","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI32
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P24000","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI33
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO)","evidences":[{"source":"PubMed","id":"15542864","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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