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8JP9

Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate D)

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0016020cellular_componentmembrane
C0005509molecular_functioncalcium ion binding
C0005515molecular_functionprotein binding
C0005783cellular_componentendoplasmic reticulum
C0005789cellular_componentendoplasmic reticulum membrane
C0005793cellular_componentendoplasmic reticulum-Golgi intermediate compartment
C0005794cellular_componentGolgi apparatus
C0006888biological_processendoplasmic reticulum to Golgi vesicle-mediated transport
C0012507cellular_componentER to Golgi transport vesicle membrane
C0015031biological_processprotein transport
C0016192biological_processvesicle-mediated transport
C0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
C0046872molecular_functionmetal ion binding
D0005509molecular_functioncalcium ion binding
D0005515molecular_functionprotein binding
D0005783cellular_componentendoplasmic reticulum
D0005789cellular_componentendoplasmic reticulum membrane
D0005793cellular_componentendoplasmic reticulum-Golgi intermediate compartment
D0005794cellular_componentGolgi apparatus
D0006888biological_processendoplasmic reticulum to Golgi vesicle-mediated transport
D0012507cellular_componentER to Golgi transport vesicle membrane
D0015031biological_processprotein transport
D0016192biological_processvesicle-mediated transport
D0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
D0046872molecular_functionmetal ion binding
E0016020cellular_componentmembrane
F0016020cellular_componentmembrane
G0005509molecular_functioncalcium ion binding
G0005515molecular_functionprotein binding
G0005783cellular_componentendoplasmic reticulum
G0005789cellular_componentendoplasmic reticulum membrane
G0005793cellular_componentendoplasmic reticulum-Golgi intermediate compartment
G0005794cellular_componentGolgi apparatus
G0006888biological_processendoplasmic reticulum to Golgi vesicle-mediated transport
G0012507cellular_componentER to Golgi transport vesicle membrane
G0015031biological_processprotein transport
G0016192biological_processvesicle-mediated transport
G0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
G0046872molecular_functionmetal ion binding
H0005509molecular_functioncalcium ion binding
H0005515molecular_functionprotein binding
H0005783cellular_componentendoplasmic reticulum
H0005789cellular_componentendoplasmic reticulum membrane
H0005793cellular_componentendoplasmic reticulum-Golgi intermediate compartment
H0005794cellular_componentGolgi apparatus
H0006888biological_processendoplasmic reticulum to Golgi vesicle-mediated transport
H0012507cellular_componentER to Golgi transport vesicle membrane
H0015031biological_processprotein transport
H0016192biological_processvesicle-mediated transport
H0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
H0046872molecular_functionmetal ion binding
Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DYDGNNLLDglEL
ChainResidueDetails
CASP81-LEU93
CASP129-PHE141

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues892
DetailsDomain: {"description":"L-type lectin-like","evidences":[{"source":"PROSITE-ProRule","id":"PRU00658","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00658","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues36
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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