8J7A

Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)

Functional Information from GO Data

Chain	GOid	namespace	contents
1	0003729	molecular_function	mRNA binding
1	0005515	molecular_function	protein binding
1	0009409	biological_process	response to cold
1	0009507	cellular_component	chloroplast
1	0009534	cellular_component	chloroplast thylakoid
1	0009535	cellular_component	chloroplast thylakoid membrane
1	0009579	cellular_component	thylakoid
1	0009644	biological_process	response to high light intensity
1	0009645	biological_process	response to low light intensity stimulus
1	0009765	biological_process	photosynthesis, light harvesting
1	0009768	biological_process	photosynthesis, light harvesting in photosystem I
1	0009941	cellular_component	chloroplast envelope
1	0010287	cellular_component	plastoglobule
1	0016020	cellular_component	membrane
1	0019904	molecular_function	protein domain specific binding
2	0005515	molecular_function	protein binding
2	0005829	cellular_component	cytosol
2	0009409	biological_process	response to cold
2	0009507	cellular_component	chloroplast
2	0009534	cellular_component	chloroplast thylakoid
2	0009535	cellular_component	chloroplast thylakoid membrane
2	0009579	cellular_component	thylakoid
2	0009644	biological_process	response to high light intensity
2	0009645	biological_process	response to low light intensity stimulus
2	0009765	biological_process	photosynthesis, light harvesting
2	0009768	biological_process	photosynthesis, light harvesting in photosystem I
2	0016020	cellular_component	membrane
2	0016168	molecular_function	chlorophyll binding
2	0019904	molecular_function	protein domain specific binding
3	0003729	molecular_function	mRNA binding
3	0005515	molecular_function	protein binding
3	0005634	cellular_component	nucleus
3	0009409	biological_process	response to cold
3	0009507	cellular_component	chloroplast
3	0009534	cellular_component	chloroplast thylakoid
3	0009535	cellular_component	chloroplast thylakoid membrane
3	0009579	cellular_component	thylakoid
3	0009644	biological_process	response to high light intensity
3	0009645	biological_process	response to low light intensity stimulus
3	0009765	biological_process	photosynthesis, light harvesting
3	0009768	biological_process	photosynthesis, light harvesting in photosystem I
3	0010287	cellular_component	plastoglobule
3	0016020	cellular_component	membrane
3	0019904	molecular_function	protein domain specific binding
4	0003729	molecular_function	mRNA binding
4	0005829	cellular_component	cytosol
4	0009409	biological_process	response to cold
4	0009507	cellular_component	chloroplast
4	0009534	cellular_component	chloroplast thylakoid
4	0009535	cellular_component	chloroplast thylakoid membrane
4	0009579	cellular_component	thylakoid
4	0009644	biological_process	response to high light intensity
4	0009645	biological_process	response to low light intensity stimulus
4	0009765	biological_process	photosynthesis, light harvesting
4	0009768	biological_process	photosynthesis, light harvesting in photosystem I
4	0009941	cellular_component	chloroplast envelope
4	0016020	cellular_component	membrane
4	0019904	molecular_function	protein domain specific binding
A	0000287	molecular_function	magnesium ion binding
A	0003729	molecular_function	mRNA binding
A	0009055	molecular_function	electron transfer activity
A	0009507	cellular_component	chloroplast
A	0009534	cellular_component	chloroplast thylakoid
A	0009535	cellular_component	chloroplast thylakoid membrane
A	0009536	cellular_component	plastid
A	0009579	cellular_component	thylakoid
A	0009941	cellular_component	chloroplast envelope
A	0010287	cellular_component	plastoglobule
A	0015979	biological_process	photosynthesis
A	0016020	cellular_component	membrane
A	0046872	molecular_function	metal ion binding
B	0000287	molecular_function	magnesium ion binding
B	0003729	molecular_function	mRNA binding
B	0009055	molecular_function	electron transfer activity
B	0009507	cellular_component	chloroplast
B	0009522	cellular_component	photosystem I
B	0009534	cellular_component	chloroplast thylakoid
B	0009535	cellular_component	chloroplast thylakoid membrane
B	0009536	cellular_component	plastid
B	0009579	cellular_component	thylakoid
B	0009941	cellular_component	chloroplast envelope
B	0015979	biological_process	photosynthesis
B	0016020	cellular_component	membrane
C	0003729	molecular_function	mRNA binding
C	0005634	cellular_component	nucleus
C	0009055	molecular_function	electron transfer activity
C	0009507	cellular_component	chloroplast
C	0009522	cellular_component	photosystem I
C	0009533	cellular_component	chloroplast stromal thylakoid
C	0009534	cellular_component	chloroplast thylakoid
C	0009535	cellular_component	chloroplast thylakoid membrane
C	0009536	cellular_component	plastid
C	0009773	biological_process	photosynthetic electron transport in photosystem I
C	0015979	biological_process	photosynthesis
C	0042651	cellular_component	thylakoid membrane
C	0051539	molecular_function	4 iron, 4 sulfur cluster binding
D	0003729	molecular_function	mRNA binding
D	0005515	molecular_function	protein binding
D	0005576	cellular_component	extracellular region
D	0009507	cellular_component	chloroplast
D	0009522	cellular_component	photosystem I
D	0009534	cellular_component	chloroplast thylakoid
D	0009535	cellular_component	chloroplast thylakoid membrane
D	0009538	cellular_component	photosystem I reaction center
D	0009579	cellular_component	thylakoid
D	0009941	cellular_component	chloroplast envelope
D	0015979	biological_process	photosynthesis
D	0019904	molecular_function	protein domain specific binding
E	0003729	molecular_function	mRNA binding
E	0005886	cellular_component	plasma membrane
E	0009507	cellular_component	chloroplast
E	0009522	cellular_component	photosystem I
E	0009534	cellular_component	chloroplast thylakoid
E	0009535	cellular_component	chloroplast thylakoid membrane
E	0009538	cellular_component	photosystem I reaction center
E	0009579	cellular_component	thylakoid
E	0009941	cellular_component	chloroplast envelope
E	0010287	cellular_component	plastoglobule
E	0015979	biological_process	photosynthesis
E	0019904	molecular_function	protein domain specific binding
F	0003729	molecular_function	mRNA binding
F	0005515	molecular_function	protein binding
F	0005634	cellular_component	nucleus
F	0009507	cellular_component	chloroplast
F	0009522	cellular_component	photosystem I
F	0009534	cellular_component	chloroplast thylakoid
F	0009535	cellular_component	chloroplast thylakoid membrane
F	0009538	cellular_component	photosystem I reaction center
F	0009579	cellular_component	thylakoid
F	0009941	cellular_component	chloroplast envelope
F	0010287	cellular_component	plastoglobule
F	0015979	biological_process	photosynthesis
F	0019904	molecular_function	protein domain specific binding
G	0003674	molecular_function	molecular_function
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0009507	cellular_component	chloroplast
G	0009522	cellular_component	photosystem I
G	0009534	cellular_component	chloroplast thylakoid
G	0009535	cellular_component	chloroplast thylakoid membrane
G	0009579	cellular_component	thylakoid
G	0009773	biological_process	photosynthetic electron transport in photosystem I
G	0009780	biological_process	photosynthetic NADP+ reduction
G	0009941	cellular_component	chloroplast envelope
G	0015979	biological_process	photosynthesis
G	0016020	cellular_component	membrane
G	0030093	cellular_component	chloroplast photosystem I
G	0031969	cellular_component	chloroplast membrane
G	0042550	biological_process	photosystem I stabilization
G	0050821	biological_process	protein stabilization
H	0003674	molecular_function	molecular_function
H	0005634	cellular_component	nucleus
H	0009507	cellular_component	chloroplast
H	0009522	cellular_component	photosystem I
H	0009534	cellular_component	chloroplast thylakoid
H	0009535	cellular_component	chloroplast thylakoid membrane
H	0009538	cellular_component	photosystem I reaction center
H	0009579	cellular_component	thylakoid
H	0015979	biological_process	photosynthesis
I	0003674	molecular_function	molecular_function
I	0009507	cellular_component	chloroplast
I	0009522	cellular_component	photosystem I
I	0009535	cellular_component	chloroplast thylakoid membrane
I	0015979	biological_process	photosynthesis
J	0003674	molecular_function	molecular_function
J	0009507	cellular_component	chloroplast
J	0009522	cellular_component	photosystem I
J	0009535	cellular_component	chloroplast thylakoid membrane
J	0009536	cellular_component	plastid
J	0015979	biological_process	photosynthesis
K	0003674	molecular_function	molecular_function
K	0005634	cellular_component	nucleus
K	0009507	cellular_component	chloroplast
K	0009522	cellular_component	photosystem I
K	0009534	cellular_component	chloroplast thylakoid
K	0009535	cellular_component	chloroplast thylakoid membrane
K	0009579	cellular_component	thylakoid
K	0015979	biological_process	photosynthesis
K	0016020	cellular_component	membrane
L	0003729	molecular_function	mRNA binding
L	0005515	molecular_function	protein binding
L	0005829	cellular_component	cytosol
L	0009507	cellular_component	chloroplast
L	0009522	cellular_component	photosystem I
L	0009534	cellular_component	chloroplast thylakoid
L	0009535	cellular_component	chloroplast thylakoid membrane
L	0009538	cellular_component	photosystem I reaction center
L	0009579	cellular_component	thylakoid
L	0009941	cellular_component	chloroplast envelope
L	0010287	cellular_component	plastoglobule
L	0015979	biological_process	photosynthesis
L	0019904	molecular_function	protein domain specific binding
L	0031969	cellular_component	chloroplast membrane

Functional Information from PROSITE/UniProt

site_id	PS00198
Number of Residues	12
Details	4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCTqCVrACP

Chain	Residue	Details
C	CYS11-PRO22
C	CYS48-PRO59

---

site_id	PS00228
Number of Residues	4
Details	TUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MRDL

Chain	Residue	Details
J	MET1-LEU4

---

site_id	PS00419
Number of Residues	10
Details	PHOTOSYSTEM_I_PSAAB Photosystem I psaA and psaB proteins signature. CDGPGRGGTC

Chain	Residue	Details
A	CYS573-CYS582
B	CYS559-CYS568

---

site_id	PS01026
Number of Residues	18
Details	PHOTOSYSTEM_I_PSAGK Photosystem I psaG and psaK proteins signature. GFnIvDvlAwGSiGHiVA

Chain	Residue	Details
G	GLY126-ALA143
K	GLY100-GLY117

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	376
Details	Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	16
Details	Binding site: {"description":"axial binding residue","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	11
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	15
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"UniProtKB","id":"P12333","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P07371","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"22092075","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=I","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=II","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	24
Details	Transmembrane: {"description":"Helical; Name=III","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	18
Details	Transmembrane: {"description":"Helical; Name=IV","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=V","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	26
Details	Transmembrane: {"description":"Helical; Name=VI","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	22
Details	Transmembrane: {"description":"Helical; Name=VII","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	18
Details	Transmembrane: {"description":"Helical; Name=VIII","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	21
Details	Transmembrane: {"description":"Helical; Name=IX","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	22
Details	Transmembrane: {"description":"Helical; Name=X","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	20
Details	Transmembrane: {"description":"Helical; Name=XI","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI18
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI19
Number of Residues	2
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI20
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=I","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI21
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=II","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI22
Number of Residues	24
Details	Transmembrane: {"description":"Helical; Name=III","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI23
Number of Residues	18
Details	Transmembrane: {"description":"Helical; Name=IV","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI24
Number of Residues	23
Details	Transmembrane: {"description":"Helical; Name=V","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI25
Number of Residues	26
Details	Transmembrane: {"description":"Helical; Name=VI","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI26
Number of Residues	22
Details	Transmembrane: {"description":"Helical; Name=VII","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI27
Number of Residues	18
Details	Transmembrane: {"description":"Helical; Name=VIII","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI28
Number of Residues	21
Details	Transmembrane: {"description":"Helical; Name=IX","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI29
Number of Residues	22
Details	Transmembrane: {"description":"Helical; Name=X","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI30
Number of Residues	20
Details	Transmembrane: {"description":"Helical; Name=XI","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI31
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI32
Number of Residues	2
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_00482","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI33
Number of Residues	29
Details	Domain: {"description":"4Fe-4S ferredoxin-type 1","evidences":[{"source":"HAMAP-Rule","id":"MF_01303","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI34
Number of Residues	29
Details	Domain: {"description":"4Fe-4S ferredoxin-type 2","evidences":[{"source":"HAMAP-Rule","id":"MF_01303","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI35
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01303","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI36
Number of Residues	8
Details	Region: {"description":"Ferredoxin and ferredoxin-oxidoreductase binding","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI37
Number of Residues	20
Details	Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_00522","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI38
Number of Residues	35
Details	Topological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---