Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IJ1

Protomer 1 and 2 of the asymmetry trimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000082biological_processG1/S transition of mitotic cell cycle
A0004842molecular_functionubiquitin-protein transferase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005730cellular_componentnucleolus
A0005829cellular_componentcytosol
A0016567biological_processprotein ubiquitination
A0019005cellular_componentSCF ubiquitin ligase complex
A0030163biological_processprotein catabolic process
A0030674molecular_functionprotein-macromolecule adaptor activity
A0030891cellular_componentVCB complex
A0031146biological_processSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
A0031461cellular_componentcullin-RING ubiquitin ligase complex
A0031462cellular_componentCul2-RING ubiquitin ligase complex
A0031625molecular_functionubiquitin protein ligase binding
A0044877molecular_functionprotein-containing complex binding
A0097193biological_processintrinsic apoptotic signaling pathway
A0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
A0160072molecular_functionubiquitin ligase complex scaffold activity
D0002070biological_processepithelial cell maturation
D0005123molecular_functiondeath receptor binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006915biological_processapoptotic process
D0016567biological_processprotein ubiquitination
D0031462cellular_componentCul2-RING ubiquitin ligase complex
D0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
D0046872molecular_functionmetal ion binding
D0051438biological_processregulation of ubiquitin-protein transferase activity
D0060442biological_processbranching involved in prostate gland morphogenesis
D0060743biological_processepithelial cell maturation involved in prostate gland development
D0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
D1902041biological_processregulation of extrinsic apoptotic signaling pathway via death domain receptors
D1990756molecular_functionubiquitin-like ligase-substrate adaptor activity
D2000001biological_processregulation of DNA damage checkpoint
F0000082biological_processG1/S transition of mitotic cell cycle
F0004842molecular_functionubiquitin-protein transferase activity
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005730cellular_componentnucleolus
F0005829cellular_componentcytosol
F0016567biological_processprotein ubiquitination
F0019005cellular_componentSCF ubiquitin ligase complex
F0030163biological_processprotein catabolic process
F0030674molecular_functionprotein-macromolecule adaptor activity
F0030891cellular_componentVCB complex
F0031146biological_processSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
F0031461cellular_componentcullin-RING ubiquitin ligase complex
F0031462cellular_componentCul2-RING ubiquitin ligase complex
F0031625molecular_functionubiquitin protein ligase binding
F0044877molecular_functionprotein-containing complex binding
F0097193biological_processintrinsic apoptotic signaling pathway
F0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
F0160072molecular_functionubiquitin ligase complex scaffold activity
I0002070biological_processepithelial cell maturation
I0005123molecular_functiondeath receptor binding
I0005515molecular_functionprotein binding
I0005634cellular_componentnucleus
I0005654cellular_componentnucleoplasm
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0006915biological_processapoptotic process
I0016567biological_processprotein ubiquitination
I0031462cellular_componentCul2-RING ubiquitin ligase complex
I0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
I0046872molecular_functionmetal ion binding
I0051438biological_processregulation of ubiquitin-protein transferase activity
I0060442biological_processbranching involved in prostate gland morphogenesis
I0060743biological_processepithelial cell maturation involved in prostate gland development
I0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
I1902041biological_processregulation of extrinsic apoptotic signaling pathway via death domain receptors
I1990756molecular_functionubiquitin-like ligase-substrate adaptor activity
I2000001biological_processregulation of DNA damage checkpoint
R0000165biological_processMAPK cascade
R0000209biological_processprotein polyubiquitination
R0004842molecular_functionubiquitin-protein transferase activity
R0005515molecular_functionprotein binding
R0005634cellular_componentnucleus
R0005654cellular_componentnucleoplasm
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0006281biological_processDNA repair
R0006511biological_processubiquitin-dependent protein catabolic process
R0006513biological_processprotein monoubiquitination
R0006974biological_processDNA damage response
R0007283biological_processspermatogenesis
R0016567biological_processprotein ubiquitination
R0016740molecular_functiontransferase activity
R0019005cellular_componentSCF ubiquitin ligase complex
R0019788molecular_functionNEDD8 transferase activity
R0030163biological_processprotein catabolic process
R0031146biological_processSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
R0031461cellular_componentcullin-RING ubiquitin ligase complex
R0031462cellular_componentCul2-RING ubiquitin ligase complex
R0031463cellular_componentCul3-RING ubiquitin ligase complex
R0031464cellular_componentCul4A-RING E3 ubiquitin ligase complex
R0031465cellular_componentCul4B-RING E3 ubiquitin ligase complex
R0031466cellular_componentCul5-RING ubiquitin ligase complex
R0031467cellular_componentCul7-RING ubiquitin ligase complex
R0031625molecular_functionubiquitin protein ligase binding
R0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
R0032480biological_processnegative regulation of type I interferon production
R0034450molecular_functionubiquitin-ubiquitin ligase activity
R0034644biological_processcellular response to UV
R0042110biological_processT cell activation
R0043123biological_processpositive regulation of canonical NF-kappaB signal transduction
R0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
R0043687biological_processpost-translational protein modification
R0045116biological_processprotein neddylation
R0045732biological_processpositive regulation of protein catabolic process
R0046872molecular_functionmetal ion binding
R0060090molecular_functionmolecular adaptor activity
R0061629molecular_functionRNA polymerase II-specific DNA-binding transcription factor binding
R0061630molecular_functionubiquitin protein ligase activity
R0061663molecular_functionNEDD8 ligase activity
R0062197biological_processcellular response to chemical stress
R0070936biological_processprotein K48-linked ubiquitination
R0071230biological_processcellular response to amino acid stimulus
R0090090biological_processnegative regulation of canonical Wnt signaling pathway
R0097602molecular_functioncullin family protein binding
R0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
R1900076biological_processregulation of cellular response to insulin stimulus
R1902499biological_processpositive regulation of protein autoubiquitination
R1902883biological_processnegative regulation of response to oxidative stress
R1904263biological_processpositive regulation of TORC1 signaling
Functional Information from PROSITE/UniProt
site_idPS01256
Number of Residues28
DetailsCULLIN_1 Cullin family signature. IKkcIevLIDKqYIeRsqasadeYsYvA
ChainResidueDetails
AILE718-ALA745

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9Z2G0
ChainResidueDetails
DHIS185
DCYS186
DHIS218
IHIS185
ICYS186
IHIS218

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Cleavage; by a caspase-3-like protease => ECO:0000269|PubMed:10542291
ChainResidueDetails
DASP342
RCYS94
RASP97
IASP342
RCYS53
RCYS56
RCYS68
RCYS75
RHIS77
RHIS80
RHIS82

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:11961546, ECO:0007744|PDB:1LDJ, ECO:0007744|PDB:1LDK, ECO:0007744|PDB:1U6G, ECO:0007744|PDB:2HYE, ECO:0007744|PDB:3DQV, ECO:0007744|PDB:3RTR, ECO:0007744|PDB:4F52, ECO:0007744|PDB:4P5O
ChainResidueDetails
RCYS83
FLYS689

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:20068231
ChainResidueDetails
RMET1

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N-acetylalanine; in E3 ubiquitin-protein ligase RBX1, N-terminally processed => ECO:0000269|Ref.8, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378
ChainResidueDetails
RALA2

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
ChainResidueDetails
RTHR9

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon