| Chain | GOid | namespace | contents |
| A | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| A | 0000785 | cellular_component | chromatin |
| A | 0003714 | molecular_function | transcription corepressor activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005730 | cellular_component | nucleolus |
| A | 0006325 | biological_process | chromatin organization |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0032221 | cellular_component | Rpd3S complex |
| A | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| A | 0060090 | molecular_function | molecular adaptor activity |
| A | 0070822 | cellular_component | Sin3-type complex |
| B | 0000785 | cellular_component | chromatin |
| B | 0004407 | molecular_function | histone deacetylase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005730 | cellular_component | nucleolus |
| B | 0005829 | cellular_component | cytosol |
| B | 0006325 | biological_process | chromatin organization |
| B | 0010468 | biological_process | regulation of gene expression |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0031078 | molecular_function | histone H3K14 deacetylase activity |
| B | 0031507 | biological_process | heterochromatin formation |
| B | 0032129 | molecular_function | histone H3K9 deacetylase activity |
| B | 0032221 | cellular_component | Rpd3S complex |
| B | 0033558 | molecular_function | protein lysine deacetylase activity |
| B | 0033698 | cellular_component | Rpd3L complex |
| B | 0034739 | molecular_function | histone H4K16 deacetylase activity |
| B | 0040029 | biological_process | epigenetic regulation of gene expression |
| B | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| B | 0070210 | cellular_component | Rpd3L-Expanded complex |
| B | 0140937 | molecular_function | histone H4K12 deacetylase activity |
| B | 0180032 | molecular_function | histone H4K5 deacetylase activity |
| B | 0180033 | molecular_function | histone H4K48 deacetylase activity |
| C | 0000510 | molecular_function | H3-H4 histone complex chaperone activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005730 | cellular_component | nucleolus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006325 | biological_process | chromatin organization |
| C | 0006338 | biological_process | chromatin remodeling |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0032221 | cellular_component | Rpd3S complex |
| C | 0033698 | cellular_component | Rpd3L complex |
| C | 0042393 | molecular_function | histone binding |
| C | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| C | 0070210 | cellular_component | Rpd3L-Expanded complex |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005730 | cellular_component | nucleolus |
| D | 0006281 | biological_process | DNA repair |
| D | 0006325 | biological_process | chromatin organization |
| D | 0006338 | biological_process | chromatin remodeling |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0010468 | biological_process | regulation of gene expression |
| D | 0032221 | cellular_component | Rpd3S complex |
| D | 0035267 | cellular_component | NuA4 histone acetyltransferase complex |
| D | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| D | 0140861 | biological_process | DNA repair-dependent chromatin remodeling |
| E | 0005515 | molecular_function | protein binding |
| E | 0005634 | cellular_component | nucleus |
| E | 0005730 | cellular_component | nucleolus |
| E | 0006281 | biological_process | DNA repair |
| E | 0006325 | biological_process | chromatin organization |
| E | 0006338 | biological_process | chromatin remodeling |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0010468 | biological_process | regulation of gene expression |
| E | 0032221 | cellular_component | Rpd3S complex |
| E | 0035267 | cellular_component | NuA4 histone acetyltransferase complex |
| E | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| E | 0140861 | biological_process | DNA repair-dependent chromatin remodeling |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005694 | cellular_component | chromosome |
| F | 0005829 | cellular_component | cytosol |
| F | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| F | 0032221 | cellular_component | Rpd3S complex |
| F | 0032991 | cellular_component | protein-containing complex |
| F | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005694 | cellular_component | chromosome |
| G | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| G | 0032221 | cellular_component | Rpd3S complex |
| G | 0032991 | cellular_component | protein-containing complex |
| G | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| G | 0046872 | molecular_function | metal ion binding |
| G | 0060090 | molecular_function | molecular adaptor activity |
| G | 0072686 | cellular_component | mitotic spindle |
