Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8HKV

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AL2P0002181biological_processcytoplasmic translation
AL2P0003723molecular_functionRNA binding
AL2P0003735molecular_functionstructural constituent of ribosome
AL2P0005840cellular_componentribosome
AL2P0006412biological_processtranslation
AL2P0015934cellular_componentlarge ribosomal subunit
AL2P0019843molecular_functionrRNA binding
AL2P0022625cellular_componentcytosolic large ribosomal subunit
AL2P1990904cellular_componentribonucleoprotein complex
AL3P0003723molecular_functionRNA binding
AL3P0003735molecular_functionstructural constituent of ribosome
AL3P0005840cellular_componentribosome
AL3P0006412biological_processtranslation
AL3P0019843molecular_functionrRNA binding
AL3P0022625cellular_componentcytosolic large ribosomal subunit
AL3P1990904cellular_componentribonucleoprotein complex
AL4P0003723molecular_functionRNA binding
AL4P0003735molecular_functionstructural constituent of ribosome
AL4P0005840cellular_componentribosome
AL4P0006412biological_processtranslation
AL4P0019843molecular_functionrRNA binding
AL4P1990904cellular_componentribonucleoprotein complex
AL5P0000049molecular_functiontRNA binding
AL5P0003723molecular_functionRNA binding
AL5P0003735molecular_functionstructural constituent of ribosome
AL5P0005840cellular_componentribosome
AL5P0006412biological_processtranslation
AL5P0019843molecular_functionrRNA binding
AL5P1990904cellular_componentribonucleoprotein complex
AL6P0002181biological_processcytoplasmic translation
AL6P0003723molecular_functionRNA binding
AL6P0003735molecular_functionstructural constituent of ribosome
AL6P0005840cellular_componentribosome
AL6P0006412biological_processtranslation
AL6P0019843molecular_functionrRNA binding
AL6P0022625cellular_componentcytosolic large ribosomal subunit
AL6P1990904cellular_componentribonucleoprotein complex
ALX00003735molecular_functionstructural constituent of ribosome
ALX00005840cellular_componentribosome
ALX00006412biological_processtranslation
L10E0003735molecular_functionstructural constituent of ribosome
L10E0005840cellular_componentribosome
L10E0006412biological_processtranslation
L10E1990904cellular_componentribonucleoprotein complex
L13P0003729molecular_functionmRNA binding
L13P0003735molecular_functionstructural constituent of ribosome
L13P0005840cellular_componentribosome
L13P0006412biological_processtranslation
L13P0015934cellular_componentlarge ribosomal subunit
L13P0017148biological_processnegative regulation of translation
L13P0022625cellular_componentcytosolic large ribosomal subunit
L13P1990904cellular_componentribonucleoprotein complex
L1410003723molecular_functionRNA binding
L1410003735molecular_functionstructural constituent of ribosome
L1410005840cellular_componentribosome
L1410006412biological_processtranslation
L1410022625cellular_componentcytosolic large ribosomal subunit
L1410042273biological_processribosomal large subunit biogenesis
L1411990904cellular_componentribonucleoprotein complex
L1420003723molecular_functionRNA binding
L1420003735molecular_functionstructural constituent of ribosome
L1420005840cellular_componentribosome
L1420006412biological_processtranslation
L1420022625cellular_componentcytosolic large ribosomal subunit
L1420042273biological_processribosomal large subunit biogenesis
L1421990904cellular_componentribonucleoprotein complex
L14P0003723molecular_functionRNA binding
L14P0003735molecular_functionstructural constituent of ribosome
L14P0005840cellular_componentribosome
L14P0006412biological_processtranslation
L14P0019843molecular_functionrRNA binding
L14P0022625cellular_componentcytosolic large ribosomal subunit
L14P0070180molecular_functionlarge ribosomal subunit rRNA binding
L14P1990904cellular_componentribonucleoprotein complex
L15E0003735molecular_functionstructural constituent of ribosome
L15E0005840cellular_componentribosome
L15E0006412biological_processtranslation
L15P0003723molecular_functionRNA binding
L15P0003735molecular_functionstructural constituent of ribosome
L15P0005840cellular_componentribosome
L15P0006412biological_processtranslation
L15P0015934cellular_componentlarge ribosomal subunit
L15P0019843molecular_functionrRNA binding
L15P0022625cellular_componentcytosolic large ribosomal subunit
L15P1990904cellular_componentribonucleoprotein complex
L18E0003735molecular_functionstructural constituent of ribosome
L18E0005840cellular_componentribosome
L18E0006412biological_processtranslation
L18E1990904cellular_componentribonucleoprotein complex
L18P0000027biological_processribosomal large subunit assembly
L18P0003723molecular_functionRNA binding
L18P0003735molecular_functionstructural constituent of ribosome
L18P0005840cellular_componentribosome
L18P0006412biological_processtranslation
L18P0008097molecular_function5S rRNA binding
L18P0019843molecular_functionrRNA binding
L18P0022625cellular_componentcytosolic large ribosomal subunit
L18P1990904cellular_componentribonucleoprotein complex
L19E0003723molecular_functionRNA binding
L19E0003735molecular_functionstructural constituent of ribosome
L19E0005840cellular_componentribosome
L19E0006412biological_processtranslation
L19E0019843molecular_functionrRNA binding
L19E0022625cellular_componentcytosolic large ribosomal subunit
L19E0070180molecular_functionlarge ribosomal subunit rRNA binding
L19E1990904cellular_componentribonucleoprotein complex
L21E0003735molecular_functionstructural constituent of ribosome
L21E0005840cellular_componentribosome
L21E0006412biological_processtranslation
L21E1990904cellular_componentribonucleoprotein complex
L22P0002181biological_processcytoplasmic translation
L22P0003723molecular_functionRNA binding
L22P0003735molecular_functionstructural constituent of ribosome
L22P0005840cellular_componentribosome
L22P0006412biological_processtranslation
L22P0015934cellular_componentlarge ribosomal subunit
L22P0019843molecular_functionrRNA binding
L22P0022625cellular_componentcytosolic large ribosomal subunit
L22P1990904cellular_componentribonucleoprotein complex
L23P0003723molecular_functionRNA binding
L23P0003735molecular_functionstructural constituent of ribosome
L23P0005840cellular_componentribosome
L23P0006412biological_processtranslation
L23P0019843molecular_functionrRNA binding
L23P1990904cellular_componentribonucleoprotein complex
L24E0003735molecular_functionstructural constituent of ribosome
L24P0003723molecular_functionRNA binding
L24P0003735molecular_functionstructural constituent of ribosome
L24P0005840cellular_componentribosome
L24P0006412biological_processtranslation
L24P0015934cellular_componentlarge ribosomal subunit
L24P0019843molecular_functionrRNA binding
L24P1990904cellular_componentribonucleoprotein complex
L29P0003735molecular_functionstructural constituent of ribosome
L29P0005840cellular_componentribosome
L29P0006412biological_processtranslation
L29P1990904cellular_componentribonucleoprotein complex
L30E0003723molecular_functionRNA binding
L30E0003735molecular_functionstructural constituent of ribosome
L30E0005840cellular_componentribosome
L30E0006412biological_processtranslation
L30E0022625cellular_componentcytosolic large ribosomal subunit
L30E1990904cellular_componentribonucleoprotein complex
L30P0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L30P0003723molecular_functionRNA binding
L30P0003735molecular_functionstructural constituent of ribosome
L30P0005840cellular_componentribosome
L30P0006412biological_processtranslation
L30P0015934cellular_componentlarge ribosomal subunit
L30P0022625cellular_componentcytosolic large ribosomal subunit
L30P1990904cellular_componentribonucleoprotein complex
L31E0003735molecular_functionstructural constituent of ribosome
L31E0005840cellular_componentribosome
L31E0006412biological_processtranslation
L32E0003735molecular_functionstructural constituent of ribosome
L32E0005840cellular_componentribosome
L32E0006412biological_processtranslation
L32E0022625cellular_componentcytosolic large ribosomal subunit
L32E1990904cellular_componentribonucleoprotein complex
L34E0003735molecular_functionstructural constituent of ribosome
L34E0005840cellular_componentribosome
L34E0006412biological_processtranslation
L37A0003723molecular_functionRNA binding
L37A0003735molecular_functionstructural constituent of ribosome
L37A0005840cellular_componentribosome
L37A0006412biological_processtranslation
L37A0008270molecular_functionzinc ion binding
L37A0019843molecular_functionrRNA binding
L37A0070180molecular_functionlarge ribosomal subunit rRNA binding
L37A1990904cellular_componentribonucleoprotein complex
L37E0003735molecular_functionstructural constituent of ribosome
L37E0005840cellular_componentribosome
L37E0006412biological_processtranslation
L39E0003735molecular_functionstructural constituent of ribosome
L39E0005840cellular_componentribosome
L39E0006412biological_processtranslation
L39E0022625cellular_componentcytosolic large ribosomal subunit
L39E1990904cellular_componentribonucleoprotein complex
L40E0003735molecular_functionstructural constituent of ribosome
L40E0005840cellular_componentribosome
L40E0006412biological_processtranslation
L40E1990904cellular_componentribonucleoprotein complex
L44E0003723molecular_functionRNA binding
L44E0003735molecular_functionstructural constituent of ribosome
L44E0005840cellular_componentribosome
L44E0006412biological_processtranslation
L44E0008270molecular_functionzinc ion binding
L44E0019843molecular_functionrRNA binding
L44E0046872molecular_functionmetal ion binding
L44E0070180molecular_functionlarge ribosomal subunit rRNA binding
L44E1990904cellular_componentribonucleoprotein complex
L7A10001682biological_processtRNA 5'-leader removal
L7A10003723molecular_functionRNA binding
L7A10003735molecular_functionstructural constituent of ribosome
L7A10004526molecular_functionribonuclease P activity
L7A10005737cellular_componentcytoplasm
L7A10005840cellular_componentribosome
L7A10006412biological_processtranslation
L7A10008033biological_processtRNA processing
L7A10019843molecular_functionrRNA binding
L7A10042254biological_processribosome biogenesis
L7A11990904cellular_componentribonucleoprotein complex
L7A20001682biological_processtRNA 5'-leader removal
L7A20003723molecular_functionRNA binding
L7A20003735molecular_functionstructural constituent of ribosome
L7A20004526molecular_functionribonuclease P activity
L7A20005737cellular_componentcytoplasm
L7A20005840cellular_componentribosome
L7A20006412biological_processtranslation
L7A20008033biological_processtRNA processing
L7A20019843molecular_functionrRNA binding
L7A20042254biological_processribosome biogenesis
L7A21990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrqrmpfrrp.DGtwisFedNavVI
ChainResidueDetails
L14PALA77-ILE103
site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVKLKqeykasdV
ChainResidueDetails
L23PLYS60-VAL75
site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. KTqaeIrfNplrRNWRR
ChainResidueDetails
L39ELYS30-ARG46
site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. VqeLTGVkpVyTkGRkS
ChainResidueDetails
AL5PVAL40-SER56
site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KryMtRAfGRstrkykylSHIEViL
ChainResidueDetails
L22PLYS129-LEU153
site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FregqltDiiGvTkGKGfqGvikR
ChainResidueDetails
AL3PPHE200-ARG223
site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGvGnLdhp..VtVvalsFSkpAkekIlrsG
ChainResidueDetails
L18ELYS62-GLY92
L15PLYS105-GLY135
site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QRRLaAdiagVGlnnIKFNP
ChainResidueDetails
L19EGLN7-PRO26
site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. NTASIKnTRKDIARI
ChainResidueDetails
L29PASN41-ILE55
site_idPS00580
Number of Residues23
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FlRfdwdKyyRIgrqerWRKprG
ChainResidueDetails
L32EPHE18-GLY40
site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. SstkIvgYdrRiFsDGIYIykK
ChainResidueDetails
AL6PSER159-LYS180
site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkvilGtRktLKllKtGkvKgVVV
ChainResidueDetails
L30ESER15-VAL39
site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPknkl.GKqiyrnLkAYiG
ChainResidueDetails
L13PVAL86-GLY108
site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTlcGKpfmvsvIgIvDeG
ChainResidueDetails
L30EGLU71-GLY91
site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FcGkdIlPGtGlmYvRnD
ChainResidueDetails
L24EPHE9-ASP26
site_idPS01077
Number of Residues21
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkMnktptHvrCrRCG
ChainResidueDetails
L37EGLY3-GLY23
site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekkIPYvyVpSKksLG
ChainResidueDetails
L7A1CYS70-GLY87
site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. EeLeaPRrkRAyINIyKI
ChainResidueDetails
L18EGLU30-ILE47
site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. SgSfRkvfvKLPSG
ChainResidueDetails
L34ESER8-GLY21
site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GEyVvvkinpsihk.GmpHrrYhGkVG
ChainResidueDetails
L21EGLY39-GLY64
site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. NRARaLGYkAkqGFVMVRvRVrRG
ChainResidueDetails
L15EASN46-GLY69
site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqdGMRlSFGKPiGtaARL
ChainResidueDetails
L10EALA106-LEU127
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues34
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues30
DetailsZinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00773","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00773","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues18
DetailsZinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00547","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00547","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

244349

PDB entries from 2025-11-05

PDB statisticsPDBj update infoContact PDBjnumon