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8HF3

Cryo-EM structure of human ZDHHC9/GCP16 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000139cellular_componentGolgi membrane
A0000165biological_processMAPK cascade
A0002178cellular_componentpalmitoyltransferase complex
A0002826biological_processnegative regulation of T-helper 1 type immune response
A0005515molecular_functionprotein binding
A0005783cellular_componentendoplasmic reticulum
A0005789cellular_componentendoplasmic reticulum membrane
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0006511biological_processubiquitin-dependent protein catabolic process
A0006612biological_processprotein targeting to membrane
A0016020cellular_componentmembrane
A0016409molecular_functionpalmitoyltransferase activity
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
A0018230biological_processpeptidyl-L-cysteine S-palmitoylation
A0019062biological_processvirion attachment to host cell
A0019706molecular_functionprotein-cysteine S-palmitoyltransferase activity
A0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
A0036503biological_processERAD pathway
A0043849molecular_functionRas palmitoyltransferase activity
A0044794biological_processpositive regulation by host of viral process
A0051604biological_processprotein maturation
A0140639biological_processpositive regulation of pyroptotic inflammatory response
A0140896biological_processcGAS/STING signaling pathway
A0141111biological_processpositive regulation of cGAS/STING signaling pathway
A0141201biological_processpyroptotic cell death
B0000139cellular_componentGolgi membrane
B0002178cellular_componentpalmitoyltransferase complex
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005794cellular_componentGolgi apparatus
B0005795cellular_componentGolgi stack
B0006612biological_processprotein targeting to membrane
B0006893biological_processGolgi to plasma membrane transport
B0016020cellular_componentmembrane
B0018230biological_processpeptidyl-L-cysteine S-palmitoylation
B0043001biological_processGolgi to plasma membrane protein transport
B0050821biological_processprotein stabilization
B0070062cellular_componentextracellular exosome
B1904724cellular_componenttertiary granule lumen
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues80
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues29
DetailsTopological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues98
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues50
DetailsDomain: {"description":"DHHC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00067","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsActive site: {"description":"S-palmitoyl cysteine intermediate","evidences":[{"source":"PubMed","id":"16000296","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"37802025","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsLipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"PubMed","id":"14522980","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

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PDB entries from 2025-07-30

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