Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8GHU

Methyltransferase RmtC bound to the 30S ribosomal subunit

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006364	biological_process	rRNA processing
A	0008168	molecular_function	methyltransferase activity
A	0008649	molecular_function	rRNA methyltransferase activity
A	0016740	molecular_function	transferase activity
A	0031167	biological_process	rRNA methylation
A	0032259	biological_process	methylation
A	0046677	biological_process	response to antibiotic
c	0003676	molecular_function	nucleic acid binding
c	0003723	molecular_function	RNA binding
c	0003735	molecular_function	structural constituent of ribosome
c	0006412	biological_process	translation
d	0000028	biological_process	ribosomal small subunit assembly
d	0000900	molecular_function	mRNA regulatory element binding translation repressor activity
d	0002181	biological_process	cytoplasmic translation
d	0003723	molecular_function	RNA binding
d	0003735	molecular_function	structural constituent of ribosome
d	0005515	molecular_function	protein binding
d	0005737	cellular_component	cytoplasm
d	0005829	cellular_component	cytosol
d	0005840	cellular_component	ribosome
d	0006351	biological_process	DNA-templated transcription
d	0006353	biological_process	DNA-templated transcription termination
d	0006412	biological_process	translation
d	0006417	biological_process	regulation of translation
d	0015935	cellular_component	small ribosomal subunit
d	0019843	molecular_function	rRNA binding
d	0022627	cellular_component	cytosolic small ribosomal subunit
d	0031564	biological_process	transcription antitermination
d	0042254	biological_process	ribosome biogenesis
d	0042274	biological_process	ribosomal small subunit biogenesis
d	0045947	biological_process	negative regulation of translational initiation
d	0046677	biological_process	response to antibiotic
d	0048027	molecular_function	mRNA 5'-UTR binding
d	1990145	biological_process	maintenance of translational fidelity
d	1990904	cellular_component	ribonucleoprotein complex
e	0000028	biological_process	ribosomal small subunit assembly
e	0002181	biological_process	cytoplasmic translation
e	0003723	molecular_function	RNA binding
e	0003735	molecular_function	structural constituent of ribosome
e	0005515	molecular_function	protein binding
e	0005737	cellular_component	cytoplasm
e	0005829	cellular_component	cytosol
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0015935	cellular_component	small ribosomal subunit
e	0019843	molecular_function	rRNA binding
e	0022627	cellular_component	cytosolic small ribosomal subunit
e	0042254	biological_process	ribosome biogenesis
e	0046677	biological_process	response to antibiotic
e	1990145	biological_process	maintenance of translational fidelity
e	1990904	cellular_component	ribonucleoprotein complex
f	0003735	molecular_function	structural constituent of ribosome
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0019843	molecular_function	rRNA binding
g	0003723	molecular_function	RNA binding
g	0003735	molecular_function	structural constituent of ribosome
g	0006412	biological_process	translation
g	0015935	cellular_component	small ribosomal subunit
h	0000028	biological_process	ribosomal small subunit assembly
h	0002181	biological_process	cytoplasmic translation
h	0003723	molecular_function	RNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005737	cellular_component	cytoplasm
h	0005829	cellular_component	cytosol
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0006417	biological_process	regulation of translation
h	0019843	molecular_function	rRNA binding
h	0022627	cellular_component	cytosolic small ribosomal subunit
h	0043488	biological_process	regulation of mRNA stability
h	1990904	cellular_component	ribonucleoprotein complex
l	0000049	molecular_function	tRNA binding
l	0000372	biological_process	Group I intron splicing
l	0002181	biological_process	cytoplasmic translation
l	0003723	molecular_function	RNA binding
l	0003735	molecular_function	structural constituent of ribosome
l	0005515	molecular_function	protein binding
l	0005737	cellular_component	cytoplasm
l	0005829	cellular_component	cytosol
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0015935	cellular_component	small ribosomal subunit
l	0019843	molecular_function	rRNA binding
l	0022627	cellular_component	cytosolic small ribosomal subunit
l	0033120	biological_process	positive regulation of RNA splicing
l	0034336	molecular_function	misfolded RNA binding
l	0034337	biological_process	RNA folding
l	0046677	biological_process	response to antibiotic
l	1990145	biological_process	maintenance of translational fidelity
l	1990904	cellular_component	ribonucleoprotein complex
m	0003676	molecular_function	nucleic acid binding
m	0003723	molecular_function	RNA binding
m	0003735	molecular_function	structural constituent of ribosome
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
o	0000028	biological_process	ribosomal small subunit assembly
o	0002181	biological_process	cytoplasmic translation
o	0003723	molecular_function	RNA binding
o	0003735	molecular_function	structural constituent of ribosome
o	0005737	cellular_component	cytoplasm
o	0005829	cellular_component	cytosol
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0006417	biological_process	regulation of translation
o	0019843	molecular_function	rRNA binding
o	0022627	cellular_component	cytosolic small ribosomal subunit
o	0070181	molecular_function	small ribosomal subunit rRNA binding
o	1990904	cellular_component	ribonucleoprotein complex
p	0000028	biological_process	ribosomal small subunit assembly
p	0000400	molecular_function	four-way junction DNA binding
p	0002181	biological_process	cytoplasmic translation
p	0003735	molecular_function	structural constituent of ribosome
p	0004518	molecular_function	nuclease activity
p	0004519	molecular_function	endonuclease activity
p	0004520	molecular_function	DNA endonuclease activity
p	0005737	cellular_component	cytoplasm
p	0005840	cellular_component	ribosome
p	0006259	biological_process	DNA metabolic process
p	0006412	biological_process	translation
p	0015935	cellular_component	small ribosomal subunit
p	0016787	molecular_function	hydrolase activity
p	0022627	cellular_component	cytosolic small ribosomal subunit
p	1990904	cellular_component	ribonucleoprotein complex
q	0000028	biological_process	ribosomal small subunit assembly
q	0002181	biological_process	cytoplasmic translation
q	0003723	molecular_function	RNA binding
q	0003735	molecular_function	structural constituent of ribosome
q	0005737	cellular_component	cytoplasm
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
q	0008270	molecular_function	zinc ion binding
q	0019843	molecular_function	rRNA binding
q	0022627	cellular_component	cytosolic small ribosomal subunit
q	0046677	biological_process	response to antibiotic
q	0070181	molecular_function	small ribosomal subunit rRNA binding
q	1990904	cellular_component	ribonucleoprotein complex
r	0003735	molecular_function	structural constituent of ribosome
r	0005840	cellular_component	ribosome
r	0006412	biological_process	translation
t	0000028	biological_process	ribosomal small subunit assembly
t	0002181	biological_process	cytoplasmic translation
t	0003723	molecular_function	RNA binding
t	0003735	molecular_function	structural constituent of ribosome
t	0005737	cellular_component	cytoplasm
t	0005829	cellular_component	cytosol
t	0005840	cellular_component	ribosome
t	0006412	biological_process	translation
t	0008073	molecular_function	ornithine decarboxylase inhibitor activity
t	0015935	cellular_component	small ribosomal subunit
t	0019843	molecular_function	rRNA binding
t	0022627	cellular_component	cytosolic small ribosomal subunit
t	0070181	molecular_function	small ribosomal subunit rRNA binding
t	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA

Chain	Residue	Details
g	SER19-ALA45

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR

Chain	Residue	Details
h	GLY99-ARG116

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
l	LYS42-ARG49

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS

Chain	Residue	Details
q	GLY55-SER67

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI

Chain	Residue	Details
r	ILE20-ILE43

site_id	PS00061
Number of Residues	29
Details	ADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG

Chain	Residue	Details
m	PRO10-GLY38

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY

Chain	Residue	Details
o	LEU39-TYR69

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG

Chain	Residue	Details
c	ALA162-GLY196

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI

Chain	Residue	Details
e	GLY27-ILE59

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV

Chain	Residue	Details
d	LEU93-VAL117

site_id	PS00732
Number of Residues	10
Details	RIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA

Chain	Residue	Details
p	VAL2-ALA11

site_id	PS01048
Number of Residues	10
Details	RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN

Chain	Residue	Details
f	GLY43-ASN52

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI2
Number of Residues	68
Details	Domain: {"description":"KH type-2"}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	60
Details	Domain: {"description":"S4 RNA-binding"}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	63
Details	Domain: {"description":"S5 DRBM"}

Chain

Residue

Details

site_id	SWS_FT_FI7
Number of Residues	2
Details	Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"18723842","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI8
Number of Residues	1
Details	Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"source":"PubMed","id":"8844851","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)