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8FIZ

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AB0000028biological_processribosomal small subunit assembly
AB0002181biological_processcytoplasmic translation
AB0003723molecular_functionRNA binding
AB0003735molecular_functionstructural constituent of ribosome
AB0005737cellular_componentcytoplasm
AB0005829cellular_componentcytosol
AB0005840cellular_componentribosome
AB0006412biological_processtranslation
AB0008073molecular_functionornithine decarboxylase inhibitor activity
AB0015935cellular_componentsmall ribosomal subunit
AB0019843molecular_functionrRNA binding
AB0022627cellular_componentcytosolic small ribosomal subunit
AB0070181molecular_functionsmall ribosomal subunit rRNA binding
AB1990904cellular_componentribonucleoprotein complex
AC0000049molecular_functiontRNA binding
AC0000372biological_processGroup I intron splicing
AC0002181biological_processcytoplasmic translation
AC0003735molecular_functionstructural constituent of ribosome
AC0005515molecular_functionprotein binding
AC0005737cellular_componentcytoplasm
AC0005829cellular_componentcytosol
AC0005840cellular_componentribosome
AC0006412biological_processtranslation
AC0015935cellular_componentsmall ribosomal subunit
AC0019843molecular_functionrRNA binding
AC0022627cellular_componentcytosolic small ribosomal subunit
AC0033120biological_processpositive regulation of RNA splicing
AC0034336molecular_functionmisfolded RNA binding
AC0034337biological_processRNA folding
AC0046677biological_processresponse to antibiotic
AC1990145biological_processmaintenance of translational fidelity
AC1990904cellular_componentribonucleoprotein complex
AD0000028biological_processribosomal small subunit assembly
AD0000049molecular_functiontRNA binding
AD0002181biological_processcytoplasmic translation
AD0003723molecular_functionRNA binding
AD0003735molecular_functionstructural constituent of ribosome
AD0005737cellular_componentcytoplasm
AD0005829cellular_componentcytosol
AD0005840cellular_componentribosome
AD0006412biological_processtranslation
AD0015935cellular_componentsmall ribosomal subunit
AD0019843molecular_functionrRNA binding
AD0022627cellular_componentcytosolic small ribosomal subunit
AD1990904cellular_componentribonucleoprotein complex
AE0000049molecular_functiontRNA binding
AE0002181biological_processcytoplasmic translation
AE0003676molecular_functionnucleic acid binding
AE0003723molecular_functionRNA binding
AE0003735molecular_functionstructural constituent of ribosome
AE0005515molecular_functionprotein binding
AE0005737cellular_componentcytoplasm
AE0005829cellular_componentcytosol
AE0005840cellular_componentribosome
AE0006412biological_processtranslation
AE0015935cellular_componentsmall ribosomal subunit
AE0019843molecular_functionrRNA binding
AE0022627cellular_componentcytosolic small ribosomal subunit
AE1990904cellular_componentribonucleoprotein complex
AF0000028biological_processribosomal small subunit assembly
AF0000049molecular_functiontRNA binding
AF0002181biological_processcytoplasmic translation
AF0003735molecular_functionstructural constituent of ribosome
AF0005737cellular_componentcytoplasm
AF0005840cellular_componentribosome
AF0006412biological_processtranslation
AF0015935cellular_componentsmall ribosomal subunit
AF0019843molecular_functionrRNA binding
AF0022627cellular_componentcytosolic small ribosomal subunit
AF1990904cellular_componentribonucleoprotein complex
AG0000028biological_processribosomal small subunit assembly
AG0002181biological_processcytoplasmic translation
AG0003676molecular_functionnucleic acid binding
AG0003723molecular_functionRNA binding
AG0003729molecular_functionmRNA binding
AG0003735molecular_functionstructural constituent of ribosome
AG0005737cellular_componentcytoplasm
AG0005829cellular_componentcytosol
AG0005840cellular_componentribosome
AG0006412biological_processtranslation
AG0019843molecular_functionrRNA binding
AG0022627cellular_componentcytosolic small ribosomal subunit
AG1990904cellular_componentribonucleoprotein complex
AH0000049molecular_functiontRNA binding
AH0001072molecular_functiontranscription antitermination factor activity, RNA binding
AH0002181biological_processcytoplasmic translation
AH0003723molecular_functionRNA binding
AH0003735molecular_functionstructural constituent of ribosome
AH0005515molecular_functionprotein binding
AH0005737cellular_componentcytoplasm
AH0005829cellular_componentcytosol
AH0005840cellular_componentribosome
AH0006412biological_processtranslation
AH0008023cellular_componenttranscription elongation factor complex
AH0015935cellular_componentsmall ribosomal subunit
AH0022627cellular_componentcytosolic small ribosomal subunit
AH0031564biological_processtranscription antitermination
AH0032784biological_processregulation of DNA-templated transcription elongation
AH0042254biological_processribosome biogenesis
AH1990904cellular_componentribonucleoprotein complex
AI0000028biological_processribosomal small subunit assembly
AI0000900molecular_functionmRNA regulatory element binding translation repressor activity
AI0002181biological_processcytoplasmic translation
AI0003723molecular_functionRNA binding
AI0003735molecular_functionstructural constituent of ribosome
AI0005515molecular_functionprotein binding
AI0005737cellular_componentcytoplasm
AI0005829cellular_componentcytosol
AI0005840cellular_componentribosome
AI0006353biological_processDNA-templated transcription termination
AI0006412biological_processtranslation
AI0006417biological_processregulation of translation
AI0015935cellular_componentsmall ribosomal subunit
AI0019843molecular_functionrRNA binding
AI0022627cellular_componentcytosolic small ribosomal subunit
AI0031564biological_processtranscription antitermination
AI0042254biological_processribosome biogenesis
AI0042274biological_processribosomal small subunit biogenesis
AI0045947biological_processnegative regulation of translational initiation
AI0046677biological_processresponse to antibiotic
AI0048027molecular_functionmRNA 5'-UTR binding
AI1990145biological_processmaintenance of translational fidelity
AI1990904cellular_componentribonucleoprotein complex
AJ0000028biological_processribosomal small subunit assembly
AJ0002181biological_processcytoplasmic translation
AJ0003735molecular_functionstructural constituent of ribosome
AJ0005515molecular_functionprotein binding
AJ0005737cellular_componentcytoplasm
AJ0005840cellular_componentribosome
AJ0006412biological_processtranslation
AJ0008270molecular_functionzinc ion binding
AJ0015935cellular_componentsmall ribosomal subunit
AJ0022627cellular_componentcytosolic small ribosomal subunit
AJ1990904cellular_componentribonucleoprotein complex
AK0000049molecular_functiontRNA binding
AK0002181biological_processcytoplasmic translation
AK0003723molecular_functionRNA binding
AK0003735molecular_functionstructural constituent of ribosome
AK0005737cellular_componentcytoplasm
AK0005829cellular_componentcytosol
AK0005840cellular_componentribosome
AK0006412biological_processtranslation
AK0022627cellular_componentcytosolic small ribosomal subunit
AK1990904cellular_componentribonucleoprotein complex
AL0000028biological_processribosomal small subunit assembly
AL0000049molecular_functiontRNA binding
AL0002181biological_processcytoplasmic translation
AL0003723molecular_functionRNA binding
AL0003729molecular_functionmRNA binding
AL0003735molecular_functionstructural constituent of ribosome
AL0005515molecular_functionprotein binding
AL0005737cellular_componentcytoplasm
AL0005829cellular_componentcytosol
AL0005840cellular_componentribosome
AL0006412biological_processtranslation
AL0015935cellular_componentsmall ribosomal subunit
AL0016020cellular_componentmembrane
AL0017148biological_processnegative regulation of translation
AL0019843molecular_functionrRNA binding
AL0022627cellular_componentcytosolic small ribosomal subunit
AL1990904cellular_componentribonucleoprotein complex
AM0002181biological_processcytoplasmic translation
AM0003735molecular_functionstructural constituent of ribosome
AM0005515molecular_functionprotein binding
AM0005737cellular_componentcytoplasm
AM0005829cellular_componentcytosol
AM0005840cellular_componentribosome
AM0006412biological_processtranslation
AM0019843molecular_functionrRNA binding
AM0022627cellular_componentcytosolic small ribosomal subunit
AM0070181molecular_functionsmall ribosomal subunit rRNA binding
AM1990904cellular_componentribonucleoprotein complex
AN0002181biological_processcytoplasmic translation
AN0003735molecular_functionstructural constituent of ribosome
AN0005515molecular_functionprotein binding
AN0005737cellular_componentcytoplasm
AN0005829cellular_componentcytosol
AN0005840cellular_componentribosome
AN0006412biological_processtranslation
AN0019843molecular_functionrRNA binding
AN0022627cellular_componentcytosolic small ribosomal subunit
AN0048027molecular_functionmRNA 5'-UTR binding
AN0070181molecular_functionsmall ribosomal subunit rRNA binding
AN1990904cellular_componentribonucleoprotein complex
AO0000028biological_processribosomal small subunit assembly
AO0000400molecular_functionfour-way junction DNA binding
AO0002181biological_processcytoplasmic translation
AO0003735molecular_functionstructural constituent of ribosome
AO0004519molecular_functionendonuclease activity
AO0004520molecular_functionDNA endonuclease activity
AO0005737cellular_componentcytoplasm
AO0005840cellular_componentribosome
AO0006259biological_processDNA metabolic process
AO0006412biological_processtranslation
AO0015935cellular_componentsmall ribosomal subunit
AO0022627cellular_componentcytosolic small ribosomal subunit
AO1990904cellular_componentribonucleoprotein complex
AP0000028biological_processribosomal small subunit assembly
AP0002181biological_processcytoplasmic translation
AP0003723molecular_functionRNA binding
AP0003735molecular_functionstructural constituent of ribosome
AP0005515molecular_functionprotein binding
AP0005737cellular_componentcytoplasm
AP0005829cellular_componentcytosol
AP0005840cellular_componentribosome
AP0006412biological_processtranslation
AP0015935cellular_componentsmall ribosomal subunit
AP0019843molecular_functionrRNA binding
AP0022627cellular_componentcytosolic small ribosomal subunit
AP0046677biological_processresponse to antibiotic
AP1990145biological_processmaintenance of translational fidelity
AP1990904cellular_componentribonucleoprotein complex
AQ0000028biological_processribosomal small subunit assembly
AQ0002181biological_processcytoplasmic translation
AQ0003735molecular_functionstructural constituent of ribosome
AQ0005737cellular_componentcytoplasm
AQ0005829cellular_componentcytosol
AQ0005840cellular_componentribosome
AQ0006412biological_processtranslation
AQ0006417biological_processregulation of translation
AQ0019843molecular_functionrRNA binding
AQ0022627cellular_componentcytosolic small ribosomal subunit
AQ0043488biological_processregulation of mRNA stability
AQ1990904cellular_componentribonucleoprotein complex
AR0000028biological_processribosomal small subunit assembly
AR0002181biological_processcytoplasmic translation
AR0003735molecular_functionstructural constituent of ribosome
AR0005737cellular_componentcytoplasm
AR0005829cellular_componentcytosol
AR0005840cellular_componentribosome
AR0006412biological_processtranslation
AR0006417biological_processregulation of translation
AR0019843molecular_functionrRNA binding
AR0022627cellular_componentcytosolic small ribosomal subunit
AR0070181molecular_functionsmall ribosomal subunit rRNA binding
AR1990904cellular_componentribonucleoprotein complex
AS0000028biological_processribosomal small subunit assembly
AS0002181biological_processcytoplasmic translation
AS0003735molecular_functionstructural constituent of ribosome
AS0005737cellular_componentcytoplasm
AS0005840cellular_componentribosome
AS0006412biological_processtranslation
AS0008270molecular_functionzinc ion binding
AS0019843molecular_functionrRNA binding
AS0022627cellular_componentcytosolic small ribosomal subunit
AS0046677biological_processresponse to antibiotic
AS0070181molecular_functionsmall ribosomal subunit rRNA binding
AS1990904cellular_componentribonucleoprotein complex
AT0002181biological_processcytoplasmic translation
AT0003735molecular_functionstructural constituent of ribosome
AT0005515molecular_functionprotein binding
AT0005737cellular_componentcytoplasm
AT0005829cellular_componentcytosol
AT0005840cellular_componentribosome
AT0006412biological_processtranslation
AT0019843molecular_functionrRNA binding
AT0022627cellular_componentcytosolic small ribosomal subunit
AT0048027molecular_functionmRNA 5'-UTR binding
AT0070181molecular_functionsmall ribosomal subunit rRNA binding
AT1990904cellular_componentribonucleoprotein complex
AU0000028biological_processribosomal small subunit assembly
AU0002181biological_processcytoplasmic translation
AU0003735molecular_functionstructural constituent of ribosome
AU0005737cellular_componentcytoplasm
AU0005829cellular_componentcytosol
AU0005840cellular_componentribosome
AU0006412biological_processtranslation
AU0019843molecular_functionrRNA binding
AU0022627cellular_componentcytosolic small ribosomal subunit
AU1990904cellular_componentribonucleoprotein complex
AV0002181biological_processcytoplasmic translation
AV0003735molecular_functionstructural constituent of ribosome
AV0005737cellular_componentcytoplasm
AV0005829cellular_componentcytosol
AV0005840cellular_componentribosome
AV0006412biological_processtranslation
AV0006413biological_processtranslational initiation
AV0008270molecular_functionzinc ion binding
AV0019843molecular_functionrRNA binding
AV0022625cellular_componentcytosolic large ribosomal subunit
AV0046872molecular_functionmetal ion binding
AV1904689biological_processnegative regulation of cytoplasmic translational initiation
AV1990904cellular_componentribonucleoprotein complex
BD0000027biological_processribosomal large subunit assembly
BD0002181biological_processcytoplasmic translation
BD0003723molecular_functionRNA binding
BD0003735molecular_functionstructural constituent of ribosome
BD0005515molecular_functionprotein binding
BD0005737cellular_componentcytoplasm
BD0005829cellular_componentcytosol
BD0005840cellular_componentribosome
BD0006412biological_processtranslation
BD0008270molecular_functionzinc ion binding
BD0015934cellular_componentlarge ribosomal subunit
BD0016740molecular_functiontransferase activity
BD0019843molecular_functionrRNA binding
BD0022625cellular_componentcytosolic large ribosomal subunit
BD0032297biological_processnegative regulation of DNA-templated DNA replication initiation
BD1990082cellular_componentDnaA-L2 complex
BD1990904cellular_componentribonucleoprotein complex
BE0000027biological_processribosomal large subunit assembly
BE0002181biological_processcytoplasmic translation
BE0003735molecular_functionstructural constituent of ribosome
BE0005515molecular_functionprotein binding
BE0005737cellular_componentcytoplasm
BE0005829cellular_componentcytosol
BE0005840cellular_componentribosome
BE0006412biological_processtranslation
BE0019843molecular_functionrRNA binding
BE0022625cellular_componentcytosolic large ribosomal subunit
BE1990904cellular_componentribonucleoprotein complex
BF0001070molecular_functionRNA-binding transcription regulator activity
BF0002181biological_processcytoplasmic translation
BF0003677molecular_functionDNA binding
BF0003735molecular_functionstructural constituent of ribosome
BF0005515molecular_functionprotein binding
BF0005737cellular_componentcytoplasm
BF0005829cellular_componentcytosol
BF0005840cellular_componentribosome
BF0006353biological_processDNA-templated transcription termination
BF0006412biological_processtranslation
BF0006417biological_processregulation of translation
BF0015934cellular_componentlarge ribosomal subunit
BF0017148biological_processnegative regulation of translation
BF0019843molecular_functionrRNA binding
BF0022625cellular_componentcytosolic large ribosomal subunit
BF0030371molecular_functiontranslation repressor activity
BF0031555biological_processtranscriptional attenuation
BF0042255biological_processribosome assembly
BF0045892biological_processnegative regulation of DNA-templated transcription
BF0046677biological_processresponse to antibiotic
BF0048027molecular_functionmRNA 5'-UTR binding
BF0060698molecular_functionendoribonuclease inhibitor activity
BF1990904cellular_componentribonucleoprotein complex
BF2000766biological_processnegative regulation of cytoplasmic translation
BG0000027biological_processribosomal large subunit assembly
BG0000049molecular_functiontRNA binding
BG0002181biological_processcytoplasmic translation
BG0003723molecular_functionRNA binding
BG0003735molecular_functionstructural constituent of ribosome
BG0005737cellular_componentcytoplasm
BG0005829cellular_componentcytosol
BG0005840cellular_componentribosome
BG0006412biological_processtranslation
BG0008097molecular_function5S rRNA binding
BG0019843molecular_functionrRNA binding
BG0022625cellular_componentcytosolic large ribosomal subunit
BG1990904cellular_componentribonucleoprotein complex
BH0002181biological_processcytoplasmic translation
BH0003735molecular_functionstructural constituent of ribosome
BH0005737cellular_componentcytoplasm
BH0005829cellular_componentcytosol
BH0005840cellular_componentribosome
BH0006412biological_processtranslation
BH0008097molecular_function5S rRNA binding
BH0019843molecular_functionrRNA binding
BH0022625cellular_componentcytosolic large ribosomal subunit
BH1990904cellular_componentribonucleoprotein complex
BI0000027biological_processribosomal large subunit assembly
BI0000049molecular_functiontRNA binding
BI0002181biological_processcytoplasmic translation
BI0003735molecular_functionstructural constituent of ribosome
BI0005737cellular_componentcytoplasm
BI0005829cellular_componentcytosol
BI0005840cellular_componentribosome
BI0006412biological_processtranslation
BI0022625cellular_componentcytosolic large ribosomal subunit
BI0046677biological_processresponse to antibiotic
BI1990904cellular_componentribonucleoprotein complex
BJ0000027biological_processribosomal large subunit assembly
BJ0002181biological_processcytoplasmic translation
BJ0003735molecular_functionstructural constituent of ribosome
BJ0005737cellular_componentcytoplasm
BJ0005829cellular_componentcytosol
BJ0005840cellular_componentribosome
BJ0006412biological_processtranslation
BJ0019843molecular_functionrRNA binding
BJ0022625cellular_componentcytosolic large ribosomal subunit
BJ0046677biological_processresponse to antibiotic
BJ0070180molecular_functionlarge ribosomal subunit rRNA binding
BJ1990904cellular_componentribonucleoprotein complex
BK0002181biological_processcytoplasmic translation
BK0003735molecular_functionstructural constituent of ribosome
BK0005515molecular_functionprotein binding
BK0005737cellular_componentcytoplasm
BK0005829cellular_componentcytosol
BK0005840cellular_componentribosome
BK0006412biological_processtranslation
BK0019843molecular_functionrRNA binding
BK0022625cellular_componentcytosolic large ribosomal subunit
BK0070180molecular_functionlarge ribosomal subunit rRNA binding
BK1990904cellular_componentribonucleoprotein complex
BL0000027biological_processribosomal large subunit assembly
BL0002181biological_processcytoplasmic translation
BL0003735molecular_functionstructural constituent of ribosome
BL0005515molecular_functionprotein binding
BL0005737cellular_componentcytoplasm
BL0005829cellular_componentcytosol
BL0005840cellular_componentribosome
BL0006412biological_processtranslation
BL0006415biological_processtranslational termination
BL0015968biological_processstringent response
BL0019843molecular_functionrRNA binding
BL0022625cellular_componentcytosolic large ribosomal subunit
BL0070180molecular_functionlarge ribosomal subunit rRNA binding
BL1990904cellular_componentribonucleoprotein complex
BM0000027biological_processribosomal large subunit assembly
BM0000302biological_processresponse to reactive oxygen species
BM0002181biological_processcytoplasmic translation
BM0003735molecular_functionstructural constituent of ribosome
BM0005515molecular_functionprotein binding
BM0005737cellular_componentcytoplasm
BM0005829cellular_componentcytosol
BM0005840cellular_componentribosome
BM0006412biological_processtranslation
BM0009314biological_processresponse to radiation
BM0015934cellular_componentlarge ribosomal subunit
BM0022625cellular_componentcytosolic large ribosomal subunit
BM1990904cellular_componentribonucleoprotein complex
BN0002181biological_processcytoplasmic translation
BN0003735molecular_functionstructural constituent of ribosome
BN0005515molecular_functionprotein binding
BN0005737cellular_componentcytoplasm
BN0005840cellular_componentribosome
BN0006412biological_processtranslation
BN0022625cellular_componentcytosolic large ribosomal subunit
BN1990904cellular_componentribonucleoprotein complex
BO0002181biological_processcytoplasmic translation
BO0003735molecular_functionstructural constituent of ribosome
BO0005737cellular_componentcytoplasm
BO0005840cellular_componentribosome
BO0006412biological_processtranslation
BO0022625cellular_componentcytosolic large ribosomal subunit
BO1990904cellular_componentribonucleoprotein complex
BP0002181biological_processcytoplasmic translation
BP0003735molecular_functionstructural constituent of ribosome
BP0005737cellular_componentcytoplasm
BP0005840cellular_componentribosome
BP0006412biological_processtranslation
BP0022625cellular_componentcytosolic large ribosomal subunit
BP1990904cellular_componentribonucleoprotein complex
BQ0000027biological_processribosomal large subunit assembly
BQ0002181biological_processcytoplasmic translation
BQ0003735molecular_functionstructural constituent of ribosome
BQ0005737cellular_componentcytoplasm
BQ0005840cellular_componentribosome
BQ0006412biological_processtranslation
BQ0015934cellular_componentlarge ribosomal subunit
BQ0022625cellular_componentcytosolic large ribosomal subunit
BQ1990904cellular_componentribonucleoprotein complex
BR0002181biological_processcytoplasmic translation
BR0003729molecular_functionmRNA binding
BR0003735molecular_functionstructural constituent of ribosome
BR0005737cellular_componentcytoplasm
BR0005829cellular_componentcytosol
BR0005840cellular_componentribosome
BR0006412biological_processtranslation
BR0008270molecular_functionzinc ion binding
BR0017148biological_processnegative regulation of translation
BR0022625cellular_componentcytosolic large ribosomal subunit
BR0048027molecular_functionmRNA 5'-UTR binding
BR0070180molecular_functionlarge ribosomal subunit rRNA binding
BR1990904cellular_componentribonucleoprotein complex
BS0002181biological_processcytoplasmic translation
BS0003735molecular_functionstructural constituent of ribosome
BS0005515molecular_functionprotein binding
BS0005737cellular_componentcytoplasm
BS0005829cellular_componentcytosol
BS0005840cellular_componentribosome
BS0006412biological_processtranslation
BS0015934cellular_componentlarge ribosomal subunit
BS0019843molecular_functionrRNA binding
BS0022625cellular_componentcytosolic large ribosomal subunit
BS0070180molecular_functionlarge ribosomal subunit rRNA binding
BS1990904cellular_componentribonucleoprotein complex
BT0002181biological_processcytoplasmic translation
BT0003735molecular_functionstructural constituent of ribosome
BT0005515molecular_functionprotein binding
BT0005737cellular_componentcytoplasm
BT0005840cellular_componentribosome
BT0006412biological_processtranslation
BT0015934cellular_componentlarge ribosomal subunit
BT0019843molecular_functionrRNA binding
BT0022625cellular_componentcytosolic large ribosomal subunit
BT1990904cellular_componentribonucleoprotein complex
BU0000027biological_processribosomal large subunit assembly
BU0000049molecular_functiontRNA binding
BU0002181biological_processcytoplasmic translation
BU0003735molecular_functionstructural constituent of ribosome
BU0005737cellular_componentcytoplasm
BU0005840cellular_componentribosome
BU0006412biological_processtranslation
BU0019843molecular_functionrRNA binding
BU0022625cellular_componentcytosolic large ribosomal subunit
BU1990904cellular_componentribonucleoprotein complex
BV0000027biological_processribosomal large subunit assembly
BV0002181biological_processcytoplasmic translation
BV0003735molecular_functionstructural constituent of ribosome
BV0005515molecular_functionprotein binding
BV0005737cellular_componentcytoplasm
BV0005829cellular_componentcytosol
BV0005840cellular_componentribosome
BV0006412biological_processtranslation
BV0022625cellular_componentcytosolic large ribosomal subunit
BV1990904cellular_componentribonucleoprotein complex
BW0000027biological_processribosomal large subunit assembly
BW0002181biological_processcytoplasmic translation
BW0003735molecular_functionstructural constituent of ribosome
BW0005737cellular_componentcytoplasm
BW0005829cellular_componentcytosol
BW0005840cellular_componentribosome
BW0006412biological_processtranslation
BW0019843molecular_functionrRNA binding
BW0022625cellular_componentcytosolic large ribosomal subunit
BW0070180molecular_functionlarge ribosomal subunit rRNA binding
BW1990904cellular_componentribonucleoprotein complex
BX0000027biological_processribosomal large subunit assembly
BX0000900molecular_functionmRNA regulatory element binding translation repressor activity
BX0002181biological_processcytoplasmic translation
BX0003729molecular_functionmRNA binding
BX0003735molecular_functionstructural constituent of ribosome
BX0005737cellular_componentcytoplasm
BX0005829cellular_componentcytosol
BX0005840cellular_componentribosome
BX0006412biological_processtranslation
BX0017148biological_processnegative regulation of translation
BX0019843molecular_functionrRNA binding
BX0022625cellular_componentcytosolic large ribosomal subunit
BX0070180molecular_functionlarge ribosomal subunit rRNA binding
BX1990904cellular_componentribonucleoprotein complex
BY0002181biological_processcytoplasmic translation
BY0003723molecular_functionRNA binding
BY0003735molecular_functionstructural constituent of ribosome
BY0005737cellular_componentcytoplasm
BY0005829cellular_componentcytosol
BY0005840cellular_componentribosome
BY0006412biological_processtranslation
BY0019843molecular_functionrRNA binding
BY0022625cellular_componentcytosolic large ribosomal subunit
BY1990904cellular_componentribonucleoprotein complex
BZ0002181biological_processcytoplasmic translation
BZ0003735molecular_functionstructural constituent of ribosome
BZ0005515molecular_functionprotein binding
BZ0005737cellular_componentcytoplasm
BZ0005829cellular_componentcytosol
BZ0005840cellular_componentribosome
BZ0006412biological_processtranslation
BZ0015934cellular_componentlarge ribosomal subunit
BZ0019843molecular_functionrRNA binding
BZ0022625cellular_componentcytosolic large ribosomal subunit
BZ0042255biological_processribosome assembly
BZ0042256biological_processcytosolic ribosome assembly
BZ0046677biological_processresponse to antibiotic
BZ0070180molecular_functionlarge ribosomal subunit rRNA binding
BZ1902626biological_processassembly of large subunit precursor of preribosome
BZ1990904cellular_componentribonucleoprotein complex
DA0000027biological_processribosomal large subunit assembly
DA0002181biological_processcytoplasmic translation
DA0003735molecular_functionstructural constituent of ribosome
DA0005515molecular_functionprotein binding
DA0005737cellular_componentcytoplasm
DA0005840cellular_componentribosome
DA0006412biological_processtranslation
DA0019843molecular_functionrRNA binding
DA0022625cellular_componentcytosolic large ribosomal subunit
DA1990904cellular_componentribonucleoprotein complex
DB0000027biological_processribosomal large subunit assembly
DB0002181biological_processcytoplasmic translation
DB0003723molecular_functionRNA binding
DB0003735molecular_functionstructural constituent of ribosome
DB0005515molecular_functionprotein binding
DB0005737cellular_componentcytoplasm
DB0005829cellular_componentcytosol
DB0005840cellular_componentribosome
DB0006412biological_processtranslation
DB0019843molecular_functionrRNA binding
DB0022625cellular_componentcytosolic large ribosomal subunit
DB0070180molecular_functionlarge ribosomal subunit rRNA binding
DB1990904cellular_componentribonucleoprotein complex
DC0000027biological_processribosomal large subunit assembly
DC0002181biological_processcytoplasmic translation
DC0003723molecular_functionRNA binding
DC0003735molecular_functionstructural constituent of ribosome
DC0005737cellular_componentcytoplasm
DC0005829cellular_componentcytosol
DC0005840cellular_componentribosome
DC0006412biological_processtranslation
DC0008097molecular_function5S rRNA binding
DC0009314biological_processresponse to radiation
DC0017148biological_processnegative regulation of translation
DC0019843molecular_functionrRNA binding
DC0022625cellular_componentcytosolic large ribosomal subunit
DC1990904cellular_componentribonucleoprotein complex
DD0000027biological_processribosomal large subunit assembly
DD0000049molecular_functiontRNA binding
DD0001558biological_processregulation of cell growth
DD0002181biological_processcytoplasmic translation
DD0003735molecular_functionstructural constituent of ribosome
DD0005515molecular_functionprotein binding
DD0005737cellular_componentcytoplasm
DD0005840cellular_componentribosome
DD0006412biological_processtranslation
DD0019843molecular_functionrRNA binding
DD0022625cellular_componentcytosolic large ribosomal subunit
DD0042256biological_processcytosolic ribosome assembly
DD0043022molecular_functionribosome binding
DD0090070biological_processpositive regulation of ribosome biogenesis
DD1902626biological_processassembly of large subunit precursor of preribosome
DD1990904cellular_componentribonucleoprotein complex
DE0000027biological_processribosomal large subunit assembly
DE0002181biological_processcytoplasmic translation
DE0003735molecular_functionstructural constituent of ribosome
DE0005515molecular_functionprotein binding
DE0005737cellular_componentcytoplasm
DE0005829cellular_componentcytosol
DE0005840cellular_componentribosome
DE0006412biological_processtranslation
DE0019843molecular_functionrRNA binding
DE0022625cellular_componentcytosolic large ribosomal subunit
DE1990904cellular_componentribonucleoprotein complex
DF0000027biological_processribosomal large subunit assembly
DF0002181biological_processcytoplasmic translation
DF0003735molecular_functionstructural constituent of ribosome
DF0005737cellular_componentcytoplasm
DF0005840cellular_componentribosome
DF0006412biological_processtranslation
DF0019843molecular_functionrRNA binding
DF0022625cellular_componentcytosolic large ribosomal subunit
DF1990904cellular_componentribonucleoprotein complex
DG0002181biological_processcytoplasmic translation
DG0003735molecular_functionstructural constituent of ribosome
DG0003924molecular_functionGTPase activity
DG0005515molecular_functionprotein binding
DG0005737cellular_componentcytoplasm
DG0005829cellular_componentcytosol
DG0005840cellular_componentribosome
DG0006412biological_processtranslation
DG0006417biological_processregulation of translation
DG0015934cellular_componentlarge ribosomal subunit
DG0017148biological_processnegative regulation of translation
DG0019843molecular_functionrRNA binding
DG0022625cellular_componentcytosolic large ribosomal subunit
DG0043022molecular_functionribosome binding
DG0070180molecular_functionlarge ribosomal subunit rRNA binding
DG1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
BSALA60-LEU86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
DALYS81-VAL96

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
ALSER20-ALA46

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
AQGLY100-ARG117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
ChainResidueDetails
AMILE97-ASN119

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
ACLYS43-ARG50

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
ASGLY56-SER68

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
ATILE21-ILE44

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
AEPRO10-GLY38

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
ADASN53-THR77

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
BGLEU57-SER73

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
BLARG127-ASP142

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
AKGLY69-LEU87

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
AHALA29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
ARLEU39-TYR69

site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
DAMET1-LYS66

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
BZLYS83-VAL107

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
BDPRO218-ASP229

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
BEPHE101-ARG124

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
BTLYS109-GLY139

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
BJPRO154-VAL162

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
AFARG63-ARG85

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
AGALA163-GLY197

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
DFGLN39-VAL53

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
BITYR21-ASP40

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
APGLY28-ILE60

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
BULYS58-PRO69

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
AILEU94-VAL118

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
BQTHR23-VAL55

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
AEARG87-GLN100

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
ChainResidueDetails
BKGLY13-THR40

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
BUARG81-TRP92

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
AOVAL2-ALA11

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
BRVAL105-GLY127

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
BNLYS2-ARG21

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
BPCYS11-GLN37

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
DDGLY34-GLY48

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
BOLYS5-HIS31

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
BXLYS54-ARG70

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
AJMET6-GLY17

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
AJPRO158-PRO182

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
BWVAL86-ARG101

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
ANGLY43-ASN52

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
DBASP8-VAL25

site_idPS01109
Number of Residues35
DetailsRIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
ChainResidueDetails
DGLYS8-ARG42

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR
ChainResidueDetails
AVASP35-ARG56

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
BVILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
BYVAL72-THR94

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
AUASP13-LYS25

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
BKLYS71
BKLYS83
BKLYS112

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
BKLYS89
BLLYS40

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
BLLYS72
BLLYS81

226262

PDB entries from 2024-10-16

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