Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DG7

Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex III

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003723molecular_functionRNA binding
A0003727molecular_functionsingle-stranded RNA binding
A0004386molecular_functionhelicase activity
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0004525molecular_functionribonuclease III activity
A0004530molecular_functiondeoxyribonuclease I activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006309biological_processapoptotic DNA fragmentation
A0006396biological_processRNA processing
A0007279biological_processpole cell formation
A0007294biological_processgermarium-derived oocyte fate determination
A0007367biological_processsegment polarity determination
A0016441biological_processpost-transcriptional gene silencing
A0016442cellular_componentRISC complex
A0016443molecular_functionbidentate ribonuclease III activity
A0016891molecular_functionRNA endonuclease activity, producing 5'-phosphomonoesters
A0030422biological_processsiRNA processing
A0030727biological_processgermarium-derived female germ-line cyst formation
A0031047biological_processregulatory ncRNA-mediated gene silencing
A0031054biological_processpre-miRNA processing
A0033227biological_processdsRNA transport
A0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
A0035196biological_processmiRNA processing
A0042078biological_processgerm-line stem cell division
A0042594biological_processresponse to starvation
A0045448biological_processmitotic cell cycle, embryonic
A0046872molecular_functionmetal ion binding
A0048813biological_processdendrite morphogenesis
A0070578cellular_componentRISC-loading complex
A0070883molecular_functionpre-miRNA binding
A0070922biological_processRISC complex assembly
K0003723molecular_functionRNA binding
K0003725molecular_functiondouble-stranded RNA binding
K0005515molecular_functionprotein binding
K0005634cellular_componentnucleus
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0007417biological_processcentral nervous system development
K0009047biological_processdosage compensation by hyperactivation of X chromosome
K0010468biological_processregulation of gene expression
K0010586biological_processmiRNA metabolic process
K0016442cellular_componentRISC complex
K0030422biological_processsiRNA processing
K0030718biological_processgerm-line stem cell population maintenance
K0031047biological_processregulatory ncRNA-mediated gene silencing
K0031054biological_processpre-miRNA processing
K0035197molecular_functionsiRNA binding
K0048132biological_processfemale germ-line stem cell asymmetric division
K0070578cellular_componentRISC-loading complex
K0070920biological_processregulation of regulatory ncRNA processing
K0070922biological_processRISC complex assembly
K1905172molecular_functionRISC complex binding
Functional Information from PROSITE/UniProt
site_idPS00517
Number of Residues9
DetailsRNASE_3_1 Ribonuclease III family signature. QRLEFLGDA
ChainResidueDetails
AGLN2029-ALA2037

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
ALEU37

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:36182693, ECO:0007744|PDB:8DG7
ChainResidueDetails
AGLU1745
AASP1905
AGLU1908

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:36182693, ECO:0007744|PDB:8DG5, ECO:0007744|PDB:8DG7
ChainResidueDetails
AASP1749

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9UPY3
ChainResidueDetails
AGLU2032
AASP2136
AGLU2139

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Important for activity => ECO:0000250
ChainResidueDetails
ALYS2132

site_idSWS_FT_FI6
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:18327897
ChainResidueDetails
ASER1423
ASER1877
ASER1880

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon