8DCR
Cryo-EM structure of dobutamine-bound beta1-adrenergic receptor in complex with heterotrimeric Gs-protein
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003924 | molecular_function | GTPase activity |
A | 0005159 | molecular_function | insulin-like growth factor receptor binding |
A | 0005525 | molecular_function | GTP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005834 | cellular_component | heterotrimeric G-protein complex |
A | 0005886 | cellular_component | plasma membrane |
A | 0007165 | biological_process | signal transduction |
A | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
A | 0007189 | biological_process | adenylate cyclase-activating G protein-coupled receptor signaling pathway |
A | 0007191 | biological_process | adenylate cyclase-activating dopamine receptor signaling pathway |
A | 0007606 | biological_process | sensory perception of chemical stimulus |
A | 0010856 | molecular_function | adenylate cyclase activator activity |
A | 0016020 | cellular_component | membrane |
A | 0016787 | molecular_function | hydrolase activity |
A | 0019001 | molecular_function | guanyl nucleotide binding |
A | 0031683 | molecular_function | G-protein beta/gamma-subunit complex binding |
A | 0031698 | molecular_function | beta-2 adrenergic receptor binding |
A | 0031748 | molecular_function | D1 dopamine receptor binding |
A | 0031852 | molecular_function | mu-type opioid receptor binding |
A | 0035255 | molecular_function | ionotropic glutamate receptor binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0051430 | molecular_function | corticotropin-releasing hormone receptor 1 binding |
A | 0071880 | biological_process | adenylate cyclase-activating adrenergic receptor signaling pathway |
B | 0001750 | cellular_component | photoreceptor outer segment |
B | 0003924 | molecular_function | GTPase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005834 | cellular_component | heterotrimeric G-protein complex |
B | 0007165 | biological_process | signal transduction |
B | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
B | 0007191 | biological_process | adenylate cyclase-activating dopamine receptor signaling pathway |
B | 0007200 | biological_process | phospholipase C-activating G protein-coupled receptor signaling pathway |
B | 0008283 | biological_process | cell population proliferation |
B | 0016020 | cellular_component | membrane |
B | 0030159 | molecular_function | signaling receptor complex adaptor activity |
B | 0044877 | molecular_function | protein-containing complex binding |
B | 0045202 | cellular_component | synapse |
B | 0050909 | biological_process | sensory perception of taste |
B | 0051020 | molecular_function | GTPase binding |
B | 0060041 | biological_process | retina development in camera-type eye |
B | 0071380 | biological_process | cellular response to prostaglandin E stimulus |
B | 0071870 | biological_process | cellular response to catecholamine stimulus |
B | 0097381 | cellular_component | photoreceptor disc membrane |
G | 0003924 | molecular_function | GTPase activity |
G | 0005515 | molecular_function | protein binding |
G | 0005834 | cellular_component | heterotrimeric G-protein complex |
G | 0005886 | cellular_component | plasma membrane |
G | 0007165 | biological_process | signal transduction |
G | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
G | 0007191 | biological_process | adenylate cyclase-activating dopamine receptor signaling pathway |
G | 0016020 | cellular_component | membrane |
G | 0031681 | molecular_function | G-protein beta-subunit binding |
G | 0071380 | biological_process | cellular response to prostaglandin E stimulus |
G | 0071870 | biological_process | cellular response to catecholamine stimulus |
R | 0003796 | molecular_function | lysozyme activity |
R | 0003824 | molecular_function | catalytic activity |
R | 0004930 | molecular_function | G protein-coupled receptor activity |
R | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
R | 0009253 | biological_process | peptidoglycan catabolic process |
R | 0016020 | cellular_component | membrane |
R | 0016787 | molecular_function | hydrolase activity |
R | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
R | 0016998 | biological_process | cell wall macromolecule catabolic process |
R | 0030430 | cellular_component | host cell cytoplasm |
R | 0031640 | biological_process | killing of cells of another organism |
R | 0042742 | biological_process | defense response to bacterium |
R | 0044659 | biological_process | viral release from host cell by cytolysis |
Functional Information from PROSITE/UniProt
site_id | PS00237 |
Number of Residues | 17 |
Details | G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. ASIeTLCVIAIDRYLaI |
Chain | Residue | Details |
R | ALA127-ILE143 |
site_id | PS00678 |
Number of Residues | 15 |
Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsqDgKLIIWDS |
Chain | Residue | Details |
B | LEU70-SER84 | |
B | ILE157-ILE171 | |
B | LEU285-ALA299 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 48 |
Details | Repeat: {"description":"WD 1","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 45 |
Details | Repeat: {"description":"WD 2","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 40 |
Details | Repeat: {"description":"WD 3","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 41 |
Details | Repeat: {"description":"WD 4","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 43 |
Details | Repeat: {"description":"WD 5","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 41 |
Details | Repeat: {"description":"WD 6","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 7","evidences":[{"source":"UniProtKB","id":"P62873","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphohistidine","evidences":[{"source":"PubMed","id":"12486123","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 9 |
Details | Region: {"description":"G3 motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01230","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 7 |
Details | Region: {"description":"G4 motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01230","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 7 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"10427002","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"11087399","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"15591060","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"16766715","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"19243146","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"9395396","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"9417641","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P63092","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P63092","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 25 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"18594507","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 26 |
Details | Transmembrane: {"description":"Helical; Name=2"} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 40 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"18594507","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 21 |
Details | Transmembrane: {"description":"Helical; Name=3"} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 23 |
Details | Transmembrane: {"description":"Helical; Name=4"} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 25 |
Details | Transmembrane: {"description":"Helical; Name=5"} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 29 |
Details | Transmembrane: {"description":"Helical; Name=6"} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 22 |
Details | Transmembrane: {"description":"Helical; Name=7"} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"18594507","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2VT4","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |