8DAT

Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (intB)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000837	cellular_component	Doa10p ubiquitin ligase complex
A	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005634	cellular_component	nucleus
A	0005737	cellular_component	cytoplasm
A	0005739	cellular_component	mitochondrion
A	0005741	cellular_component	mitochondrial outer membrane
A	0005783	cellular_component	endoplasmic reticulum
A	0005789	cellular_component	endoplasmic reticulum membrane
A	0005829	cellular_component	cytosol
A	0006274	biological_process	DNA replication termination
A	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
A	0010636	biological_process	positive regulation of mitochondrial fusion
A	0015031	biological_process	protein transport
A	0016236	biological_process	macroautophagy
A	0016320	biological_process	endoplasmic reticulum membrane fusion
A	0016787	molecular_function	hydrolase activity
A	0016887	molecular_function	ATP hydrolysis activity
A	0019888	molecular_function	protein phosphatase regulator activity
A	0030894	cellular_component	replisome
A	0030970	biological_process	retrograde protein transport, ER to cytosol
A	0031134	biological_process	sister chromatid biorientation
A	0031593	molecular_function	polyubiquitin modification-dependent protein binding
A	0032984	biological_process	protein-containing complex disassembly
A	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
A	0034517	biological_process	ribophagy
A	0034727	biological_process	piecemeal microautophagy of the nucleus
A	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
A	0036503	biological_process	ERAD pathway
A	0042802	molecular_function	identical protein binding
A	0043130	molecular_function	ubiquitin binding
A	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
A	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
A	0043332	cellular_component	mating projection tip
A	0046034	biological_process	ATP metabolic process
A	0051228	biological_process	mitotic spindle disassembly
A	0070651	biological_process	nonfunctional rRNA decay
A	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
A	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
A	0072344	biological_process	rescue of stalled ribosome
A	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
A	0097352	biological_process	autophagosome maturation
A	0099638	biological_process	endosome to plasma membrane protein transport
A	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
A	0140624	biological_process	EGAD pathway
A	1900182	biological_process	positive regulation of protein localization to nucleus
A	1902979	biological_process	mitotic DNA replication termination
A	1990112	cellular_component	RQC complex
A	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
A	1990171	biological_process	SCF complex disassembly in response to cadmium stress
B	0000166	molecular_function	nucleotide binding
B	0000837	cellular_component	Doa10p ubiquitin ligase complex
B	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005634	cellular_component	nucleus
B	0005737	cellular_component	cytoplasm
B	0005739	cellular_component	mitochondrion
B	0005741	cellular_component	mitochondrial outer membrane
B	0005783	cellular_component	endoplasmic reticulum
B	0005789	cellular_component	endoplasmic reticulum membrane
B	0005829	cellular_component	cytosol
B	0006274	biological_process	DNA replication termination
B	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
B	0010636	biological_process	positive regulation of mitochondrial fusion
B	0015031	biological_process	protein transport
B	0016236	biological_process	macroautophagy
B	0016320	biological_process	endoplasmic reticulum membrane fusion
B	0016787	molecular_function	hydrolase activity
B	0016887	molecular_function	ATP hydrolysis activity
B	0019888	molecular_function	protein phosphatase regulator activity
B	0030894	cellular_component	replisome
B	0030970	biological_process	retrograde protein transport, ER to cytosol
B	0031134	biological_process	sister chromatid biorientation
B	0031593	molecular_function	polyubiquitin modification-dependent protein binding
B	0032984	biological_process	protein-containing complex disassembly
B	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
B	0034517	biological_process	ribophagy
B	0034727	biological_process	piecemeal microautophagy of the nucleus
B	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
B	0036503	biological_process	ERAD pathway
B	0042802	molecular_function	identical protein binding
B	0043130	molecular_function	ubiquitin binding
B	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
B	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
B	0043332	cellular_component	mating projection tip
B	0046034	biological_process	ATP metabolic process
B	0051228	biological_process	mitotic spindle disassembly
B	0070651	biological_process	nonfunctional rRNA decay
B	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
B	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
B	0072344	biological_process	rescue of stalled ribosome
B	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
B	0097352	biological_process	autophagosome maturation
B	0099638	biological_process	endosome to plasma membrane protein transport
B	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
B	0140624	biological_process	EGAD pathway
B	1900182	biological_process	positive regulation of protein localization to nucleus
B	1902979	biological_process	mitotic DNA replication termination
B	1990112	cellular_component	RQC complex
B	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
B	1990171	biological_process	SCF complex disassembly in response to cadmium stress
C	0000166	molecular_function	nucleotide binding
C	0000837	cellular_component	Doa10p ubiquitin ligase complex
C	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005634	cellular_component	nucleus
C	0005737	cellular_component	cytoplasm
C	0005739	cellular_component	mitochondrion
C	0005741	cellular_component	mitochondrial outer membrane
C	0005783	cellular_component	endoplasmic reticulum
C	0005789	cellular_component	endoplasmic reticulum membrane
C	0005829	cellular_component	cytosol
C	0006274	biological_process	DNA replication termination
C	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
C	0010636	biological_process	positive regulation of mitochondrial fusion
C	0015031	biological_process	protein transport
C	0016236	biological_process	macroautophagy
C	0016320	biological_process	endoplasmic reticulum membrane fusion
C	0016787	molecular_function	hydrolase activity
C	0016887	molecular_function	ATP hydrolysis activity
C	0019888	molecular_function	protein phosphatase regulator activity
C	0030894	cellular_component	replisome
C	0030970	biological_process	retrograde protein transport, ER to cytosol
C	0031134	biological_process	sister chromatid biorientation
C	0031593	molecular_function	polyubiquitin modification-dependent protein binding
C	0032984	biological_process	protein-containing complex disassembly
C	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
C	0034517	biological_process	ribophagy
C	0034727	biological_process	piecemeal microautophagy of the nucleus
C	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
C	0036503	biological_process	ERAD pathway
C	0042802	molecular_function	identical protein binding
C	0043130	molecular_function	ubiquitin binding
C	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
C	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
C	0043332	cellular_component	mating projection tip
C	0046034	biological_process	ATP metabolic process
C	0051228	biological_process	mitotic spindle disassembly
C	0070651	biological_process	nonfunctional rRNA decay
C	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
C	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
C	0072344	biological_process	rescue of stalled ribosome
C	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
C	0097352	biological_process	autophagosome maturation
C	0099638	biological_process	endosome to plasma membrane protein transport
C	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
C	0140624	biological_process	EGAD pathway
C	1900182	biological_process	positive regulation of protein localization to nucleus
C	1902979	biological_process	mitotic DNA replication termination
C	1990112	cellular_component	RQC complex
C	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
C	1990171	biological_process	SCF complex disassembly in response to cadmium stress
D	0000166	molecular_function	nucleotide binding
D	0000837	cellular_component	Doa10p ubiquitin ligase complex
D	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005634	cellular_component	nucleus
D	0005737	cellular_component	cytoplasm
D	0005739	cellular_component	mitochondrion
D	0005741	cellular_component	mitochondrial outer membrane
D	0005783	cellular_component	endoplasmic reticulum
D	0005789	cellular_component	endoplasmic reticulum membrane
D	0005829	cellular_component	cytosol
D	0006274	biological_process	DNA replication termination
D	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
D	0010636	biological_process	positive regulation of mitochondrial fusion
D	0015031	biological_process	protein transport
D	0016236	biological_process	macroautophagy
D	0016320	biological_process	endoplasmic reticulum membrane fusion
D	0016787	molecular_function	hydrolase activity
D	0016887	molecular_function	ATP hydrolysis activity
D	0019888	molecular_function	protein phosphatase regulator activity
D	0030894	cellular_component	replisome
D	0030970	biological_process	retrograde protein transport, ER to cytosol
D	0031134	biological_process	sister chromatid biorientation
D	0031593	molecular_function	polyubiquitin modification-dependent protein binding
D	0032984	biological_process	protein-containing complex disassembly
D	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
D	0034517	biological_process	ribophagy
D	0034727	biological_process	piecemeal microautophagy of the nucleus
D	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
D	0036503	biological_process	ERAD pathway
D	0042802	molecular_function	identical protein binding
D	0043130	molecular_function	ubiquitin binding
D	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
D	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
D	0043332	cellular_component	mating projection tip
D	0046034	biological_process	ATP metabolic process
D	0051228	biological_process	mitotic spindle disassembly
D	0070651	biological_process	nonfunctional rRNA decay
D	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
D	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
D	0072344	biological_process	rescue of stalled ribosome
D	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
D	0097352	biological_process	autophagosome maturation
D	0099638	biological_process	endosome to plasma membrane protein transport
D	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
D	0140624	biological_process	EGAD pathway
D	1900182	biological_process	positive regulation of protein localization to nucleus
D	1902979	biological_process	mitotic DNA replication termination
D	1990112	cellular_component	RQC complex
D	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
D	1990171	biological_process	SCF complex disassembly in response to cadmium stress
E	0000166	molecular_function	nucleotide binding
E	0000837	cellular_component	Doa10p ubiquitin ligase complex
E	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005634	cellular_component	nucleus
E	0005737	cellular_component	cytoplasm
E	0005739	cellular_component	mitochondrion
E	0005741	cellular_component	mitochondrial outer membrane
E	0005783	cellular_component	endoplasmic reticulum
E	0005789	cellular_component	endoplasmic reticulum membrane
E	0005829	cellular_component	cytosol
E	0006274	biological_process	DNA replication termination
E	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
E	0010636	biological_process	positive regulation of mitochondrial fusion
E	0015031	biological_process	protein transport
E	0016236	biological_process	macroautophagy
E	0016320	biological_process	endoplasmic reticulum membrane fusion
E	0016787	molecular_function	hydrolase activity
E	0016887	molecular_function	ATP hydrolysis activity
E	0019888	molecular_function	protein phosphatase regulator activity
E	0030894	cellular_component	replisome
E	0030970	biological_process	retrograde protein transport, ER to cytosol
E	0031134	biological_process	sister chromatid biorientation
E	0031593	molecular_function	polyubiquitin modification-dependent protein binding
E	0032984	biological_process	protein-containing complex disassembly
E	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
E	0034517	biological_process	ribophagy
E	0034727	biological_process	piecemeal microautophagy of the nucleus
E	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
E	0036503	biological_process	ERAD pathway
E	0042802	molecular_function	identical protein binding
E	0043130	molecular_function	ubiquitin binding
E	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
E	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
E	0043332	cellular_component	mating projection tip
E	0046034	biological_process	ATP metabolic process
E	0051228	biological_process	mitotic spindle disassembly
E	0070651	biological_process	nonfunctional rRNA decay
E	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
E	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
E	0072344	biological_process	rescue of stalled ribosome
E	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
E	0097352	biological_process	autophagosome maturation
E	0099638	biological_process	endosome to plasma membrane protein transport
E	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
E	0140624	biological_process	EGAD pathway
E	1900182	biological_process	positive regulation of protein localization to nucleus
E	1902979	biological_process	mitotic DNA replication termination
E	1990112	cellular_component	RQC complex
E	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
E	1990171	biological_process	SCF complex disassembly in response to cadmium stress
F	0000166	molecular_function	nucleotide binding
F	0000837	cellular_component	Doa10p ubiquitin ligase complex
F	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
F	0005515	molecular_function	protein binding
F	0005524	molecular_function	ATP binding
F	0005634	cellular_component	nucleus
F	0005737	cellular_component	cytoplasm
F	0005739	cellular_component	mitochondrion
F	0005741	cellular_component	mitochondrial outer membrane
F	0005783	cellular_component	endoplasmic reticulum
F	0005789	cellular_component	endoplasmic reticulum membrane
F	0005829	cellular_component	cytosol
F	0006274	biological_process	DNA replication termination
F	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
F	0010636	biological_process	positive regulation of mitochondrial fusion
F	0015031	biological_process	protein transport
F	0016236	biological_process	macroautophagy
F	0016320	biological_process	endoplasmic reticulum membrane fusion
F	0016787	molecular_function	hydrolase activity
F	0016887	molecular_function	ATP hydrolysis activity
F	0019888	molecular_function	protein phosphatase regulator activity
F	0030894	cellular_component	replisome
F	0030970	biological_process	retrograde protein transport, ER to cytosol
F	0031134	biological_process	sister chromatid biorientation
F	0031593	molecular_function	polyubiquitin modification-dependent protein binding
F	0032984	biological_process	protein-containing complex disassembly
F	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
F	0034517	biological_process	ribophagy
F	0034727	biological_process	piecemeal microautophagy of the nucleus
F	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
F	0036503	biological_process	ERAD pathway
F	0042802	molecular_function	identical protein binding
F	0043130	molecular_function	ubiquitin binding
F	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
F	0043328	biological_process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
F	0043332	cellular_component	mating projection tip
F	0046034	biological_process	ATP metabolic process
F	0051228	biological_process	mitotic spindle disassembly
F	0070651	biological_process	nonfunctional rRNA decay
F	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
F	0071630	biological_process	nuclear protein quality control by the ubiquitin-proteasome system
F	0072344	biological_process	rescue of stalled ribosome
F	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
F	0097352	biological_process	autophagosome maturation
F	0099638	biological_process	endosome to plasma membrane protein transport
F	0120174	biological_process	stress-induced homeostatically regulated protein degradation pathway
F	0140624	biological_process	EGAD pathway
F	1900182	biological_process	positive regulation of protein localization to nucleus
F	1902979	biological_process	mitotic DNA replication termination
F	1990112	cellular_component	RQC complex
F	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
F	1990171	biological_process	SCF complex disassembly in response to cadmium stress
G	0000837	cellular_component	Doa10p ubiquitin ligase complex
G	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005737	cellular_component	cytoplasm
G	0005783	cellular_component	endoplasmic reticulum
G	0005789	cellular_component	endoplasmic reticulum membrane
G	0006274	biological_process	DNA replication termination
G	0006511	biological_process	ubiquitin-dependent protein catabolic process
G	0006515	biological_process	protein quality control for misfolded or incompletely synthesized proteins
G	0008270	molecular_function	zinc ion binding
G	0015031	biological_process	protein transport
G	0016020	cellular_component	membrane
G	0030894	cellular_component	replisome
G	0030970	biological_process	retrograde protein transport, ER to cytosol
G	0031625	molecular_function	ubiquitin protein ligase binding
G	0031965	cellular_component	nuclear membrane
G	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
G	0036266	cellular_component	Cdc48p-Npl4p-Vms1p AAA ATPase complex
G	0036435	molecular_function	K48-linked polyubiquitin modification-dependent protein binding
G	0036503	biological_process	ERAD pathway
G	0042175	cellular_component	nuclear outer membrane-endoplasmic reticulum membrane network
G	0043130	molecular_function	ubiquitin binding
G	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
G	0048471	cellular_component	perinuclear region of cytoplasm
G	0051028	biological_process	mRNA transport
G	0051228	biological_process	mitotic spindle disassembly
G	0070651	biological_process	nonfunctional rRNA decay
G	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
G	0072344	biological_process	rescue of stalled ribosome
G	0072665	biological_process	protein localization to vacuole
G	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
G	0099638	biological_process	endosome to plasma membrane protein transport
G	1900182	biological_process	positive regulation of protein localization to nucleus
G	1990112	cellular_component	RQC complex
G	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
H	0000837	cellular_component	Doa10p ubiquitin ligase complex
H	0000839	cellular_component	Hrd1p ubiquitin ligase ERAD-L complex
H	0005515	molecular_function	protein binding
H	0005634	cellular_component	nucleus
H	0005829	cellular_component	cytosol
H	0006274	biological_process	DNA replication termination
H	0006511	biological_process	ubiquitin-dependent protein catabolic process
H	0010498	biological_process	proteasomal protein catabolic process
H	0030894	cellular_component	replisome
H	0030970	biological_process	retrograde protein transport, ER to cytosol
H	0031593	molecular_function	polyubiquitin modification-dependent protein binding
H	0032182	molecular_function	ubiquitin-like protein binding
H	0034098	cellular_component	VCP-NPL4-UFD1 AAA ATPase complex
H	0036503	biological_process	ERAD pathway
H	0043130	molecular_function	ubiquitin binding
H	0043161	biological_process	proteasome-mediated ubiquitin-dependent protein catabolic process
H	0070651	biological_process	nonfunctional rRNA decay
H	0071629	biological_process	cytoplasm protein quality control by the ubiquitin-proteasome system
H	0072344	biological_process	rescue of stalled ribosome
H	0072665	biological_process	protein localization to vacuole
H	0072671	biological_process	mitochondria-associated ubiquitin-dependent protein catabolic process
H	1900182	biological_process	positive regulation of protein localization to nucleus
H	1990112	cellular_component	RQC complex
H	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process

Functional Information from PROSITE/UniProt

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
J	LYS127-ASP152

---

site_id	PS00430
Number of Residues	75
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. gshmgeehkplldasgvdpreedktatailrrkkkdnmllvddainddnsviainsntmdklelfrg................................................DTVLVKGK

Chain	Residue	Details
A	GLY-2-LYS72

---

site_id	PS00674
Number of Residues	19
Details	AAA AAA-protein family signature. VvVIaATNrpnsIDpALr.R

Chain	Residue	Details
A	VAL351-ARG369
A	VAL627-ARG645

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	48
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P55072","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	30
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"Q01853","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	6
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	6
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	6
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	30
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	18
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"12872131","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	140
Details	Domain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	150
Details	Domain: {"description":"Ubiquitin-like 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00214","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---