8CMT
Structure of the plasma coagulation Factor XIII A2B2 heterotetrameric complex.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003810 | molecular_function | protein-glutamine gamma-glutamyltransferase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005576 | cellular_component | extracellular region |
| A | 0005615 | cellular_component | extracellular space |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0007596 | biological_process | blood coagulation |
| A | 0007599 | biological_process | hemostasis |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016746 | molecular_function | acyltransferase activity |
| A | 0018149 | biological_process | peptide cross-linking |
| A | 0031093 | cellular_component | platelet alpha granule lumen |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0062023 | cellular_component | collagen-containing extracellular matrix |
| A | 0072378 | biological_process | blood coagulation, fibrin clot formation |
| A | 0072562 | cellular_component | blood microparticle |
| A | 1990234 | cellular_component | transferase complex |
| B | 0003810 | molecular_function | protein-glutamine gamma-glutamyltransferase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005576 | cellular_component | extracellular region |
| B | 0005615 | cellular_component | extracellular space |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0007596 | biological_process | blood coagulation |
| B | 0007599 | biological_process | hemostasis |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016746 | molecular_function | acyltransferase activity |
| B | 0018149 | biological_process | peptide cross-linking |
| B | 0031093 | cellular_component | platelet alpha granule lumen |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0062023 | cellular_component | collagen-containing extracellular matrix |
| B | 0072378 | biological_process | blood coagulation, fibrin clot formation |
| B | 0072562 | cellular_component | blood microparticle |
| B | 1990234 | cellular_component | transferase complex |
Functional Information from PROSITE/UniProt
| site_id | PS00547 |
| Number of Residues | 18 |
| Details | TRANSGLUTAMINASES Transglutaminases active site. GQCWVfAGVfnTfLRCLG |
| Chain | Residue | Details |
| A | GLY313-GLY330 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218 |
| Chain | Residue | Details |
| C | ASN162 | |
| D | ASN162 | |
| A | ASP397 | |
| B | CYS315 | |
| B | HIS374 | |
| B | ASP397 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952 |
| Chain | Residue | Details |
| C | ASN545 | |
| D | ASN545 | |
| A | GLU486 | |
| A | GLU491 | |
| B | ASN437 | |
| B | ASP439 | |
| B | GLU486 | |
| B | GLU491 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | SITE: Cleavage; by thrombin; to produce active factor XIII-A |
| Chain | Residue | Details |
| A | ARG38 | |
| B | ARG38 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | MOD_RES: N-acetylserine => ECO:0000305|PubMed:2877456 |
| Chain | Residue | Details |
| A | SER2 | |
| B | SER2 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952 |
| Chain | Residue | Details |
| A | ASN614 | |
| B | ASN614 |
Catalytic Information from CSA
| site_id | MCSA1 |
| Number of Residues | 5 |
| Details | M-CSA 149 |
| Chain | Residue | Details |
| A | TRP280 | electrostatic stabiliser, hydrogen bond donor |
| A | CYS315 | electrostatic stabiliser |
| A | HIS374 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| A | ASP397 | electrostatic stabiliser, hydrogen bond acceptor |
| A | TYR561 | electrostatic stabiliser, hydrogen bond donor |
| site_id | MCSA2 |
| Number of Residues | 5 |
| Details | M-CSA 149 |
| Chain | Residue | Details |
| B | TRP280 | electrostatic stabiliser, hydrogen bond donor |
| B | CYS315 | electrostatic stabiliser |
| B | HIS374 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| B | ASP397 | electrostatic stabiliser, hydrogen bond acceptor |
| B | TYR561 | electrostatic stabiliser, hydrogen bond donor |
