Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8B64

Cryo-EM structure of RC-LH1-PufX photosynthetic core complex from Rba. capsulatus

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005886	cellular_component	plasma membrane
A	0016020	cellular_component	membrane
A	0016168	molecular_function	chlorophyll binding
A	0019684	biological_process	photosynthesis, light reaction
A	0030076	cellular_component	light-harvesting complex
A	0030077	cellular_component	plasma membrane light-harvesting complex
A	0042314	molecular_function	bacteriochlorophyll binding
A	0046872	molecular_function	metal ion binding
B	0005886	cellular_component	plasma membrane
B	0016020	cellular_component	membrane
B	0016168	molecular_function	chlorophyll binding
B	0019684	biological_process	photosynthesis, light reaction
B	0030076	cellular_component	light-harvesting complex
B	0030077	cellular_component	plasma membrane light-harvesting complex
B	0042314	molecular_function	bacteriochlorophyll binding
B	0046872	molecular_function	metal ion binding
D	0005886	cellular_component	plasma membrane
D	0016020	cellular_component	membrane
D	0016168	molecular_function	chlorophyll binding
D	0019684	biological_process	photosynthesis, light reaction
D	0030076	cellular_component	light-harvesting complex
D	0030077	cellular_component	plasma membrane light-harvesting complex
D	0042314	molecular_function	bacteriochlorophyll binding
D	0046872	molecular_function	metal ion binding
E	0005886	cellular_component	plasma membrane
E	0016020	cellular_component	membrane
E	0016168	molecular_function	chlorophyll binding
E	0019684	biological_process	photosynthesis, light reaction
E	0030076	cellular_component	light-harvesting complex
E	0030077	cellular_component	plasma membrane light-harvesting complex
E	0042314	molecular_function	bacteriochlorophyll binding
E	0046872	molecular_function	metal ion binding
F	0005886	cellular_component	plasma membrane
F	0016020	cellular_component	membrane
F	0016168	molecular_function	chlorophyll binding
F	0019684	biological_process	photosynthesis, light reaction
F	0030076	cellular_component	light-harvesting complex
F	0030077	cellular_component	plasma membrane light-harvesting complex
F	0042314	molecular_function	bacteriochlorophyll binding
F	0046872	molecular_function	metal ion binding
G	0005886	cellular_component	plasma membrane
G	0016020	cellular_component	membrane
G	0016168	molecular_function	chlorophyll binding
G	0019684	biological_process	photosynthesis, light reaction
G	0030076	cellular_component	light-harvesting complex
G	0030077	cellular_component	plasma membrane light-harvesting complex
G	0042314	molecular_function	bacteriochlorophyll binding
G	0046872	molecular_function	metal ion binding
H	0015979	biological_process	photosynthesis
H	0016020	cellular_component	membrane
H	0016168	molecular_function	chlorophyll binding
H	0019684	biological_process	photosynthesis, light reaction
H	0030077	cellular_component	plasma membrane light-harvesting complex
H	0042314	molecular_function	bacteriochlorophyll binding
H	0042717	cellular_component	plasma membrane-derived chromatophore membrane
I	0005886	cellular_component	plasma membrane
I	0016020	cellular_component	membrane
I	0016168	molecular_function	chlorophyll binding
I	0019684	biological_process	photosynthesis, light reaction
I	0030076	cellular_component	light-harvesting complex
I	0030077	cellular_component	plasma membrane light-harvesting complex
I	0042314	molecular_function	bacteriochlorophyll binding
I	0046872	molecular_function	metal ion binding
J	0005886	cellular_component	plasma membrane
J	0016020	cellular_component	membrane
J	0016168	molecular_function	chlorophyll binding
J	0019684	biological_process	photosynthesis, light reaction
J	0030076	cellular_component	light-harvesting complex
J	0030077	cellular_component	plasma membrane light-harvesting complex
J	0042314	molecular_function	bacteriochlorophyll binding
J	0046872	molecular_function	metal ion binding
K	0005886	cellular_component	plasma membrane
K	0016020	cellular_component	membrane
K	0016168	molecular_function	chlorophyll binding
K	0019684	biological_process	photosynthesis, light reaction
K	0030076	cellular_component	light-harvesting complex
K	0030077	cellular_component	plasma membrane light-harvesting complex
K	0042314	molecular_function	bacteriochlorophyll binding
K	0046872	molecular_function	metal ion binding
L	0009772	biological_process	photosynthetic electron transport in photosystem II
L	0015979	biological_process	photosynthesis
L	0016020	cellular_component	membrane
L	0016168	molecular_function	chlorophyll binding
L	0019684	biological_process	photosynthesis, light reaction
L	0030077	cellular_component	plasma membrane light-harvesting complex
L	0042314	molecular_function	bacteriochlorophyll binding
L	0042717	cellular_component	plasma membrane-derived chromatophore membrane
L	0046872	molecular_function	metal ion binding
M	0009772	biological_process	photosynthetic electron transport in photosystem II
M	0015979	biological_process	photosynthesis
M	0016020	cellular_component	membrane
M	0016168	molecular_function	chlorophyll binding
M	0019684	biological_process	photosynthesis, light reaction
M	0030077	cellular_component	plasma membrane light-harvesting complex
M	0042314	molecular_function	bacteriochlorophyll binding
M	0042717	cellular_component	plasma membrane-derived chromatophore membrane
M	0046872	molecular_function	metal ion binding
N	0005886	cellular_component	plasma membrane
N	0016020	cellular_component	membrane
N	0016168	molecular_function	chlorophyll binding
N	0019684	biological_process	photosynthesis, light reaction
N	0030076	cellular_component	light-harvesting complex
N	0030077	cellular_component	plasma membrane light-harvesting complex
N	0042314	molecular_function	bacteriochlorophyll binding
N	0046872	molecular_function	metal ion binding
O	0005886	cellular_component	plasma membrane
O	0016020	cellular_component	membrane
O	0016168	molecular_function	chlorophyll binding
O	0019684	biological_process	photosynthesis, light reaction
O	0030076	cellular_component	light-harvesting complex
O	0030077	cellular_component	plasma membrane light-harvesting complex
O	0042314	molecular_function	bacteriochlorophyll binding
O	0046872	molecular_function	metal ion binding
R	0005886	cellular_component	plasma membrane
R	0016020	cellular_component	membrane
R	0016168	molecular_function	chlorophyll binding
R	0019684	biological_process	photosynthesis, light reaction
R	0030076	cellular_component	light-harvesting complex
R	0030077	cellular_component	plasma membrane light-harvesting complex
R	0042314	molecular_function	bacteriochlorophyll binding
R	0046872	molecular_function	metal ion binding
S	0005886	cellular_component	plasma membrane
S	0016020	cellular_component	membrane
S	0016168	molecular_function	chlorophyll binding
S	0019684	biological_process	photosynthesis, light reaction
S	0030076	cellular_component	light-harvesting complex
S	0030077	cellular_component	plasma membrane light-harvesting complex
S	0042314	molecular_function	bacteriochlorophyll binding
S	0046872	molecular_function	metal ion binding
T	0005886	cellular_component	plasma membrane
T	0016020	cellular_component	membrane
T	0016168	molecular_function	chlorophyll binding
T	0019684	biological_process	photosynthesis, light reaction
T	0030076	cellular_component	light-harvesting complex
T	0030077	cellular_component	plasma membrane light-harvesting complex
T	0042314	molecular_function	bacteriochlorophyll binding
T	0046872	molecular_function	metal ion binding
U	0005886	cellular_component	plasma membrane
U	0016020	cellular_component	membrane
U	0016168	molecular_function	chlorophyll binding
U	0019684	biological_process	photosynthesis, light reaction
U	0030076	cellular_component	light-harvesting complex
U	0030077	cellular_component	plasma membrane light-harvesting complex
U	0042314	molecular_function	bacteriochlorophyll binding
U	0046872	molecular_function	metal ion binding
X	0005886	cellular_component	plasma membrane
X	0015979	biological_process	photosynthesis
X	0016020	cellular_component	membrane
a	0005886	cellular_component	plasma membrane
a	0016020	cellular_component	membrane
a	0016168	molecular_function	chlorophyll binding
a	0019684	biological_process	photosynthesis, light reaction
a	0019866	cellular_component	organelle inner membrane
a	0030076	cellular_component	light-harvesting complex
a	0030077	cellular_component	plasma membrane light-harvesting complex
a	0042314	molecular_function	bacteriochlorophyll binding
a	0046872	molecular_function	metal ion binding
b	0005886	cellular_component	plasma membrane
b	0016020	cellular_component	membrane
b	0016168	molecular_function	chlorophyll binding
b	0019684	biological_process	photosynthesis, light reaction
b	0019866	cellular_component	organelle inner membrane
b	0030076	cellular_component	light-harvesting complex
b	0030077	cellular_component	plasma membrane light-harvesting complex
b	0042314	molecular_function	bacteriochlorophyll binding
b	0046872	molecular_function	metal ion binding
d	0005886	cellular_component	plasma membrane
d	0016020	cellular_component	membrane
d	0016168	molecular_function	chlorophyll binding
d	0019684	biological_process	photosynthesis, light reaction
d	0019866	cellular_component	organelle inner membrane
d	0030076	cellular_component	light-harvesting complex
d	0030077	cellular_component	plasma membrane light-harvesting complex
d	0042314	molecular_function	bacteriochlorophyll binding
d	0046872	molecular_function	metal ion binding
e	0005886	cellular_component	plasma membrane
e	0016020	cellular_component	membrane
e	0016168	molecular_function	chlorophyll binding
e	0019684	biological_process	photosynthesis, light reaction
e	0019866	cellular_component	organelle inner membrane
e	0030076	cellular_component	light-harvesting complex
e	0030077	cellular_component	plasma membrane light-harvesting complex
e	0042314	molecular_function	bacteriochlorophyll binding
e	0046872	molecular_function	metal ion binding
f	0005886	cellular_component	plasma membrane
f	0016020	cellular_component	membrane
f	0016168	molecular_function	chlorophyll binding
f	0019684	biological_process	photosynthesis, light reaction
f	0019866	cellular_component	organelle inner membrane
f	0030076	cellular_component	light-harvesting complex
f	0030077	cellular_component	plasma membrane light-harvesting complex
f	0042314	molecular_function	bacteriochlorophyll binding
f	0046872	molecular_function	metal ion binding
g	0005886	cellular_component	plasma membrane
g	0016020	cellular_component	membrane
g	0016168	molecular_function	chlorophyll binding
g	0019684	biological_process	photosynthesis, light reaction
g	0019866	cellular_component	organelle inner membrane
g	0030076	cellular_component	light-harvesting complex
g	0030077	cellular_component	plasma membrane light-harvesting complex
g	0042314	molecular_function	bacteriochlorophyll binding
g	0046872	molecular_function	metal ion binding
i	0005886	cellular_component	plasma membrane
i	0016020	cellular_component	membrane
i	0016168	molecular_function	chlorophyll binding
i	0019684	biological_process	photosynthesis, light reaction
i	0019866	cellular_component	organelle inner membrane
i	0030076	cellular_component	light-harvesting complex
i	0030077	cellular_component	plasma membrane light-harvesting complex
i	0042314	molecular_function	bacteriochlorophyll binding
i	0046872	molecular_function	metal ion binding
j	0005886	cellular_component	plasma membrane
j	0016020	cellular_component	membrane
j	0016168	molecular_function	chlorophyll binding
j	0019684	biological_process	photosynthesis, light reaction
j	0019866	cellular_component	organelle inner membrane
j	0030076	cellular_component	light-harvesting complex
j	0030077	cellular_component	plasma membrane light-harvesting complex
j	0042314	molecular_function	bacteriochlorophyll binding
j	0046872	molecular_function	metal ion binding
k	0005886	cellular_component	plasma membrane
k	0016020	cellular_component	membrane
k	0016168	molecular_function	chlorophyll binding
k	0019684	biological_process	photosynthesis, light reaction
k	0019866	cellular_component	organelle inner membrane
k	0030076	cellular_component	light-harvesting complex
k	0030077	cellular_component	plasma membrane light-harvesting complex
k	0042314	molecular_function	bacteriochlorophyll binding
k	0046872	molecular_function	metal ion binding
n	0005886	cellular_component	plasma membrane
n	0016020	cellular_component	membrane
n	0016168	molecular_function	chlorophyll binding
n	0019684	biological_process	photosynthesis, light reaction
n	0019866	cellular_component	organelle inner membrane
n	0030076	cellular_component	light-harvesting complex
n	0030077	cellular_component	plasma membrane light-harvesting complex
n	0042314	molecular_function	bacteriochlorophyll binding
n	0046872	molecular_function	metal ion binding
o	0005886	cellular_component	plasma membrane
o	0016020	cellular_component	membrane
o	0016168	molecular_function	chlorophyll binding
o	0019684	biological_process	photosynthesis, light reaction
o	0019866	cellular_component	organelle inner membrane
o	0030076	cellular_component	light-harvesting complex
o	0030077	cellular_component	plasma membrane light-harvesting complex
o	0042314	molecular_function	bacteriochlorophyll binding
o	0046872	molecular_function	metal ion binding
r	0005886	cellular_component	plasma membrane
r	0016020	cellular_component	membrane
r	0016168	molecular_function	chlorophyll binding
r	0019684	biological_process	photosynthesis, light reaction
r	0019866	cellular_component	organelle inner membrane
r	0030076	cellular_component	light-harvesting complex
r	0030077	cellular_component	plasma membrane light-harvesting complex
r	0042314	molecular_function	bacteriochlorophyll binding
r	0046872	molecular_function	metal ion binding
s	0005886	cellular_component	plasma membrane
s	0016020	cellular_component	membrane
s	0016168	molecular_function	chlorophyll binding
s	0019684	biological_process	photosynthesis, light reaction
s	0019866	cellular_component	organelle inner membrane
s	0030076	cellular_component	light-harvesting complex
s	0030077	cellular_component	plasma membrane light-harvesting complex
s	0042314	molecular_function	bacteriochlorophyll binding
s	0046872	molecular_function	metal ion binding
t	0005886	cellular_component	plasma membrane
t	0016020	cellular_component	membrane
t	0016168	molecular_function	chlorophyll binding
t	0019684	biological_process	photosynthesis, light reaction
t	0019866	cellular_component	organelle inner membrane
t	0030076	cellular_component	light-harvesting complex
t	0030077	cellular_component	plasma membrane light-harvesting complex
t	0042314	molecular_function	bacteriochlorophyll binding
t	0046872	molecular_function	metal ion binding
u	0005886	cellular_component	plasma membrane
u	0016020	cellular_component	membrane
u	0016168	molecular_function	chlorophyll binding
u	0019684	biological_process	photosynthesis, light reaction
u	0019866	cellular_component	organelle inner membrane
u	0030076	cellular_component	light-harvesting complex
u	0030077	cellular_component	plasma membrane light-harvesting complex
u	0042314	molecular_function	bacteriochlorophyll binding
u	0046872	molecular_function	metal ion binding

Functional Information from PROSITE/UniProt

site_id	PS00244
Number of Residues	27
Details	REACTION_CENTER Photosynthetic reaction center proteins signature. NlfynPfHglSiaalygsallfAmHGA

Chain	Residue	Details
M	ASN193-ALA219
L	ASN166-ALA192

site_id	PS00968
Number of Residues	19
Details	ANTENNA_COMP_ALPHA Antenna complexes alpha subunits signature. LlAVlIHlilLSTpafNWL

Chain	Residue	Details
a	LEU26-LEU44

site_id	PS00969
Number of Residues	32
Details	ANTENNA_COMP_BETA Antenna complexes beta subunits signature. QaqelHavymsGlsaFiavAvlAHlavmiwrP

Chain	Residue	Details
I	GLN16-PRO47

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	19
Details	TRANSMEM: Helical

Chain	Residue	Details
H	LEU12-LEU31
K	ALA2-ALA22
N	ALA2-ALA22
I	ALA2-ALA22
J	ALA2-ALA22
F	ALA2-ALA22
G	ALA2-ALA22
M	GLN109-LEU138
M	GLY141-MET166
M	TYR196-VAL224
M	ALA258-LEU284
T	ALA2-ALA22
U	ALA2-ALA22
O	ALA2-ALA22
R	ALA2-ALA22

site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: axial binding residue

Chain	Residue	Details
M	HIS180
K	VAL23-TRP45
N	VAL23-TRP45
I	VAL23-TRP45
J	VAL23-TRP45
F	VAL23-TRP45
G	VAL23-TRP45
M	HIS200
E	VAL23-TRP45
B	VAL23-TRP45
S	VAL23-TRP45
T	VAL23-TRP45
U	VAL23-TRP45
O	VAL23-TRP45
R	VAL23-TRP45

site_id	SWS_FT_FI3
Number of Residues	4
Details	BINDING:

Chain	Residue	Details
M	HIS217
K	ARG46-PHE49
N	ARG46-PHE49
I	ARG46-PHE49
J	ARG46-PHE49
F	ARG46-PHE49
G	ARG46-PHE49
M	GLU232
M	TRP250
M	HIS264
S	ARG46-PHE49
T	ARG46-PHE49
U	ARG46-PHE49
O	ARG46-PHE49
R	ARG46-PHE49

site_id	SWS_FT_FI4
Number of Residues	3
Details	BINDING:

Chain	Residue	Details
L	HIS190
S	HIS39
T	HIS21
T	HIS39
U	HIS21
U	HIS39
O	HIS21
O	HIS39
R	HIS21
R	HIS39
K	HIS21
L	PHE216
K	HIS39
N	HIS21
N	HIS39
I	HIS21
I	HIS39
J	HIS21
J	HIS39
F	HIS21
F	HIS39
G	HIS21
L	HIS230
G	HIS39
A	HIS39
E	HIS21
E	HIS39
B	HIS21
B	HIS39
S	HIS21

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)