8ASL
RCII/PSI complex, class 2
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0009523 | cellular_component | photosystem II |
| A | 0009635 | biological_process | response to herbicide |
| A | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
| A | 0010242 | molecular_function | oxygen evolving activity |
| A | 0015979 | biological_process | photosynthesis |
| A | 0016168 | molecular_function | chlorophyll binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016682 | molecular_function | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor |
| A | 0019684 | biological_process | photosynthesis, light reaction |
| A | 0030096 | cellular_component | plasma membrane-derived thylakoid photosystem II |
| A | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| A | 0042651 | cellular_component | thylakoid membrane |
| A | 0046872 | molecular_function | metal ion binding |
| D | 0005506 | molecular_function | iron ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0009055 | molecular_function | electron transfer activity |
| D | 0009523 | cellular_component | photosystem II |
| D | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
| D | 0010242 | molecular_function | oxygen evolving activity |
| D | 0015979 | biological_process | photosynthesis |
| D | 0016020 | cellular_component | membrane |
| D | 0016168 | molecular_function | chlorophyll binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0019684 | biological_process | photosynthesis, light reaction |
| D | 0030096 | cellular_component | plasma membrane-derived thylakoid photosystem II |
| D | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| D | 0042651 | cellular_component | thylakoid membrane |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0005506 | molecular_function | iron ion binding |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0009055 | molecular_function | electron transfer activity |
| E | 0009523 | cellular_component | photosystem II |
| E | 0009539 | cellular_component | photosystem II reaction center |
| E | 0009579 | cellular_component | thylakoid |
| E | 0009767 | biological_process | photosynthetic electron transport chain |
| E | 0015979 | biological_process | photosynthesis |
| E | 0016020 | cellular_component | membrane |
| E | 0019684 | biological_process | photosynthesis, light reaction |
| E | 0020037 | molecular_function | heme binding |
| E | 0030096 | cellular_component | plasma membrane-derived thylakoid photosystem II |
| E | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| E | 0042651 | cellular_component | thylakoid membrane |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0005506 | molecular_function | iron ion binding |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0009055 | molecular_function | electron transfer activity |
| F | 0009523 | cellular_component | photosystem II |
| F | 0009539 | cellular_component | photosystem II reaction center |
| F | 0009579 | cellular_component | thylakoid |
| F | 0009767 | biological_process | photosynthetic electron transport chain |
| F | 0015979 | biological_process | photosynthesis |
| F | 0016020 | cellular_component | membrane |
| F | 0019684 | biological_process | photosynthesis, light reaction |
| F | 0020037 | molecular_function | heme binding |
| F | 0030096 | cellular_component | plasma membrane-derived thylakoid photosystem II |
| F | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| F | 0042651 | cellular_component | thylakoid membrane |
| F | 0042802 | molecular_function | identical protein binding |
| F | 0046872 | molecular_function | metal ion binding |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0009523 | cellular_component | photosystem II |
| I | 0009539 | cellular_component | photosystem II reaction center |
| I | 0015979 | biological_process | photosynthesis |
| I | 0016020 | cellular_component | membrane |
| I | 0030096 | cellular_component | plasma membrane-derived thylakoid photosystem II |
| I | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| I | 0042651 | cellular_component | thylakoid membrane |
| a | 0000287 | molecular_function | magnesium ion binding |
| a | 0005886 | cellular_component | plasma membrane |
| a | 0009055 | molecular_function | electron transfer activity |
| a | 0009522 | cellular_component | photosystem I |
| a | 0009579 | cellular_component | thylakoid |
| a | 0015979 | biological_process | photosynthesis |
| a | 0016020 | cellular_component | membrane |
| a | 0016168 | molecular_function | chlorophyll binding |
| a | 0016491 | molecular_function | oxidoreductase activity |
| a | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| a | 0042651 | cellular_component | thylakoid membrane |
| a | 0046872 | molecular_function | metal ion binding |
| a | 0051536 | molecular_function | iron-sulfur cluster binding |
| a | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| b | 0000287 | molecular_function | magnesium ion binding |
| b | 0005886 | cellular_component | plasma membrane |
| b | 0009055 | molecular_function | electron transfer activity |
| b | 0009522 | cellular_component | photosystem I |
| b | 0009579 | cellular_component | thylakoid |
| b | 0015979 | biological_process | photosynthesis |
| b | 0016020 | cellular_component | membrane |
| b | 0016168 | molecular_function | chlorophyll binding |
| b | 0016491 | molecular_function | oxidoreductase activity |
| b | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| b | 0042651 | cellular_component | thylakoid membrane |
| b | 0046872 | molecular_function | metal ion binding |
| b | 0051536 | molecular_function | iron-sulfur cluster binding |
| b | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| c | 0009055 | molecular_function | electron transfer activity |
| c | 0009522 | cellular_component | photosystem I |
| c | 0009773 | biological_process | photosynthetic electron transport in photosystem I |
| c | 0015979 | biological_process | photosynthesis |
| c | 0016491 | molecular_function | oxidoreductase activity |
| c | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| c | 0042651 | cellular_component | thylakoid membrane |
| c | 0046872 | molecular_function | metal ion binding |
| c | 0051536 | molecular_function | iron-sulfur cluster binding |
| c | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| d | 0005515 | molecular_function | protein binding |
| d | 0005886 | cellular_component | plasma membrane |
| d | 0009522 | cellular_component | photosystem I |
| d | 0009538 | cellular_component | photosystem I reaction center |
| d | 0015979 | biological_process | photosynthesis |
| e | 0009522 | cellular_component | photosystem I |
| e | 0009538 | cellular_component | photosystem I reaction center |
| e | 0015979 | biological_process | photosynthesis |
| e | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| e | 0042651 | cellular_component | thylakoid membrane |
| f | 0009522 | cellular_component | photosystem I |
| f | 0009538 | cellular_component | photosystem I reaction center |
| f | 0015979 | biological_process | photosynthesis |
| i | 0009522 | cellular_component | photosystem I |
| i | 0015979 | biological_process | photosynthesis |
| i | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| i | 0042651 | cellular_component | thylakoid membrane |
| j | 0009522 | cellular_component | photosystem I |
| j | 0015979 | biological_process | photosynthesis |
| j | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| j | 0042651 | cellular_component | thylakoid membrane |
| k | 0009522 | cellular_component | photosystem I |
| k | 0015979 | biological_process | photosynthesis |
| k | 0016020 | cellular_component | membrane |
| k | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| k | 0042651 | cellular_component | thylakoid membrane |
| l | 0005886 | cellular_component | plasma membrane |
| l | 0009522 | cellular_component | photosystem I |
| l | 0009538 | cellular_component | photosystem I reaction center |
| l | 0015979 | biological_process | photosynthesis |
| l | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| l | 0042651 | cellular_component | thylakoid membrane |
| m | 0009522 | cellular_component | photosystem I |
| m | 0015979 | biological_process | photosynthesis |
| m | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| m | 0042651 | cellular_component | thylakoid membrane |
Functional Information from PROSITE/UniProt
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCTqCVrACP |
| Chain | Residue | Details |
| c | CYS11-PRO22 | |
| c | CYS48-PRO59 |
| site_id | PS00244 |
| Number of Residues | 27 |
| Details | REACTION_CENTER Photosynthetic reaction center proteins signature. NwtlnPfHmmGvagilggallcAiHGA |
| Chain | Residue | Details |
| D | ASN190-ALA216 | |
| A | ASN191-SER217 |
| site_id | PS00419 |
| Number of Residues | 10 |
| Details | PHOTOSYSTEM_I_PSAAB Photosystem I psaA and psaB proteins signature. CDGPGRGGTC |
| Chain | Residue | Details |
| b | CYS556-CYS565 | |
| a | CYS574-CYS583 |
| site_id | PS00537 |
| Number of Residues | 15 |
| Details | CYTOCHROME_B559 Cytochrome b559 subunits heme-binding site signature. VtSIRYwvIHSITIP |
| Chain | Residue | Details |
| E | VAL14-PRO28 | |
| F | ILE14-PRO28 |
| site_id | PS01026 |
| Number of Residues | 18 |
| Details | PHOTOSYSTEM_I_PSAGK Photosystem I psaG and psaK proteins signature. GFgLgAvlGtASfGHiLG |
| Chain | Residue | Details |
| k | GLY56-GLY73 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=I","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=II","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 24 |
| Details | Transmembrane: {"description":"Helical; Name=III","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 18 |
| Details | Transmembrane: {"description":"Helical; Name=IV","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=V","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 26 |
| Details | Transmembrane: {"description":"Helical; Name=VI","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 22 |
| Details | Transmembrane: {"description":"Helical; Name=VII","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 18 |
| Details | Transmembrane: {"description":"Helical; Name=VIII","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 21 |
| Details | Transmembrane: {"description":"Helical; Name=IX","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 22 |
| Details | Transmembrane: {"description":"Helical; Name=X","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 20 |
| Details | Transmembrane: {"description":"Helical; Name=XI","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 2 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_00458","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=I","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=II","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 24 |
| Details | Transmembrane: {"description":"Helical; Name=III","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 18 |
| Details | Transmembrane: {"description":"Helical; Name=IV","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical; Name=V","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 26 |
| Details | Transmembrane: {"description":"Helical; Name=VI","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 22 |
| Details | Transmembrane: {"description":"Helical; Name=VII","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 18 |
| Details | Transmembrane: {"description":"Helical; Name=VIII","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 21 |
| Details | Transmembrane: {"description":"Helical; Name=IX","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 22 |
| Details | Transmembrane: {"description":"Helical; Name=X","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 20 |
| Details | Transmembrane: {"description":"Helical; Name=XI","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 10 |
| Details | Binding site: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 2 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 1","evidences":[{"source":"HAMAP-Rule","id":"MF_01303","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 2","evidences":[{"source":"HAMAP-Rule","id":"MF_01303","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 30 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 120 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 19 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_00828","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 291 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 166 |
| Details | Topological domain: {"description":"Lumenal, thylakoid","evidences":[{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 15 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 2 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 1 |
| Details | Site: {"description":"Tyrosine radical intermediate","evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI42 |
| Number of Residues | 1 |
| Details | Site: {"description":"Stabilizes free radical intermediate","evidences":[{"source":"HAMAP-Rule","id":"MF_01379","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI43 |
| Number of Residues | 2 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_01383","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI44 |
| Number of Residues | 5 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01383","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI45 |
| Number of Residues | 1 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_00642","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"1904816","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI46 |
| Number of Residues | 1 |
| Details | Binding site: {"description":"axial binding residue","evidences":[{"source":"HAMAP-Rule","id":"MF_00643","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34937700","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"1904816","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7N8O","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI47 |
| Number of Residues | 24 |
| Details | Motif: {"description":"Arg-rich patch","evidences":[{"source":"PubMed","id":"30061392","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
