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7ZY3

Room temperature structure of Archaerhodopsin-3 obtained 110 ns after photoexcitation

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0016020cellular_componentmembrane
A1902600biological_processproton transmembrane transport
Functional Information from PROSITE/UniProt
site_idPS00327
Number of Residues12
DetailsBACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. FMVLDVtAKvGF
ChainResidueDetails
APHE218-PHE229

site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYaDWlFTTPLLL
ChainResidueDetails
AARG92-LEU104

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues38
DetailsTOPO_DOM: Extracellular => ECO:0000250
ChainResidueDetails
APCA7-PRO18
APHE72-TYR89
ASER138-ALA141
ATHR203-GLY210

site_idSWS_FT_FI2
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix A => ECO:0000250
ChainResidueDetails
AGLU19-ARG40

site_idSWS_FT_FI3
Number of Residues26
DetailsTOPO_DOM: Cytoplasmic => ECO:0000250
ChainResidueDetails
AGLY41-ALA49
ALYS112-ASP114
ALYS171-ARG173
AGLU244-ASP258

site_idSWS_FT_FI4
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix B => ECO:0000250
ChainResidueDetails
AARG50-PHE71

site_idSWS_FT_FI5
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix C => ECO:0000250
ChainResidueDetails
ATYR90-ALA111

site_idSWS_FT_FI6
Number of Residues22
DetailsTRANSMEM: Helical; Name=Helix D => ECO:0000250
ChainResidueDetails
AARG115-LEU137

site_idSWS_FT_FI7
Number of Residues28
DetailsTRANSMEM: Helical; Name=Helix E => ECO:0000250
ChainResidueDetails
AILE142-ALA170

site_idSWS_FT_FI8
Number of Residues28
DetailsTRANSMEM: Helical; Name=Helix F => ECO:0000250
ChainResidueDetails
AGLY174-GLY202

site_idSWS_FT_FI9
Number of Residues32
DetailsTRANSMEM: Helical; Name=Helix G => ECO:0000250
ChainResidueDetails
ALEU211-THR243

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: Pyrrolidone carboxylic acid => ECO:0000250
ChainResidueDetails
APCA7

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: N6-(retinylidene)lysine => ECO:0000250
ChainResidueDetails
ALYS226

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PDB entries from 2024-07-24

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