| Chain | GOid | namespace | contents |
| C | 0000045 | biological_process | autophagosome assembly |
| C | 0000082 | biological_process | G1/S transition of mitotic cell cycle |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| C | 0006513 | biological_process | protein monoubiquitination |
| C | 0006915 | biological_process | apoptotic process |
| C | 0007040 | biological_process | lysosome organization |
| C | 0008283 | biological_process | cell population proliferation |
| C | 0009887 | biological_process | animal organ morphogenesis |
| C | 0010507 | biological_process | negative regulation of autophagy |
| C | 0010508 | biological_process | positive regulation of autophagy |
| C | 0016567 | biological_process | protein ubiquitination |
| C | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| C | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| C | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| C | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| C | 0031625 | molecular_function | ubiquitin protein ligase binding |
| C | 0031669 | biological_process | cellular response to nutrient levels |
| C | 0034599 | biological_process | cellular response to oxidative stress |
| C | 0038202 | biological_process | TORC1 signaling |
| C | 0043123 | biological_process | positive regulation of canonical NF-kappaB signal transduction |
| C | 0043124 | biological_process | negative regulation of canonical NF-kappaB signal transduction |
| C | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| C | 0070936 | biological_process | protein K48-linked ubiquitination |
| C | 0097193 | biological_process | intrinsic apoptotic signaling pathway |
| C | 0140374 | biological_process | antiviral innate immune response |
| C | 0160072 | molecular_function | ubiquitin ligase complex scaffold activity |
| C | 1904037 | biological_process | positive regulation of epithelial cell apoptotic process |
| C | 1904262 | biological_process | negative regulation of TORC1 signaling |
| C | 1990452 | cellular_component | Parkin-FBXW7-Cul1 ubiquitin ligase complex |
| D | 0000151 | cellular_component | ubiquitin ligase complex |
| D | 0005515 | molecular_function | protein binding |
| D | 0005576 | cellular_component | extracellular region |
| D | 0005634 | cellular_component | nucleus |
| D | 0005654 | cellular_component | nucleoplasm |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005794 | cellular_component | Golgi apparatus |
| D | 0005829 | cellular_component | cytosol |
| D | 0010265 | biological_process | SCF complex assembly |
| D | 0016020 | cellular_component | membrane |
| D | 0016567 | biological_process | protein ubiquitination |
| D | 0017025 | molecular_function | TBP-class protein binding |
| D | 0030154 | biological_process | cell differentiation |
| D | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| D | 0034774 | cellular_component | secretory granule lumen |
| D | 0043086 | biological_process | negative regulation of catalytic activity |
| D | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| D | 0045899 | biological_process | positive regulation of RNA polymerase II transcription preinitiation complex assembly |
| D | 0070062 | cellular_component | extracellular exosome |
| D | 1904813 | cellular_component | ficolin-1-rich granule lumen |
| F | 0000082 | biological_process | G1/S transition of mitotic cell cycle |
| F | 0000086 | biological_process | G2/M transition of mitotic cell cycle |
| F | 0000209 | biological_process | protein polyubiquitination |
| F | 0000729 | biological_process | DNA double-strand break processing |
| F | 0002376 | biological_process | immune system process |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005730 | cellular_component | nucleolus |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005829 | cellular_component | cytosol |
| F | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| F | 0016567 | biological_process | protein ubiquitination |
| F | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| F | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| F | 0033148 | biological_process | positive regulation of intracellular estrogen receptor signaling pathway |
| F | 0042802 | molecular_function | identical protein binding |
| F | 0042981 | biological_process | regulation of apoptotic process |
| F | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| F | 0045087 | biological_process | innate immune response |
| F | 0048661 | biological_process | positive regulation of smooth muscle cell proliferation |
| F | 0051607 | biological_process | defense response to virus |
| F | 0051726 | biological_process | regulation of cell cycle |
| F | 0070534 | biological_process | protein K63-linked ubiquitination |
| F | 0070936 | biological_process | protein K48-linked ubiquitination |
| F | 0071460 | biological_process | cellular response to cell-matrix adhesion |
| F | 1902916 | biological_process | positive regulation of protein polyubiquitination |
| F | 1905168 | biological_process | positive regulation of double-strand break repair via homologous recombination |
| F | 1990166 | biological_process | protein localization to site of double-strand break |
| F | 1990756 | molecular_function | ubiquitin-like ligase-substrate adaptor activity |
| R | 0000045 | biological_process | autophagosome assembly |
| R | 0000082 | biological_process | G1/S transition of mitotic cell cycle |
| R | 0000165 | biological_process | MAPK cascade |
| R | 0000209 | biological_process | protein polyubiquitination |
| R | 0000423 | biological_process | mitophagy |
| R | 0001837 | biological_process | epithelial to mesenchymal transition |
| R | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| R | 0005515 | molecular_function | protein binding |
| R | 0005634 | cellular_component | nucleus |
| R | 0005654 | cellular_component | nucleoplasm |
| R | 0005737 | cellular_component | cytoplasm |
| R | 0005829 | cellular_component | cytosol |
| R | 0006281 | biological_process | DNA repair |
| R | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| R | 0006366 | biological_process | transcription by RNA polymerase II |
| R | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| R | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| R | 0006513 | biological_process | protein monoubiquitination |
| R | 0006915 | biological_process | apoptotic process |
| R | 0006974 | biological_process | DNA damage response |
| R | 0006979 | biological_process | response to oxidative stress |
| R | 0007040 | biological_process | lysosome organization |
| R | 0007283 | biological_process | spermatogenesis |
| R | 0007346 | biological_process | regulation of mitotic cell cycle |
| R | 0008270 | molecular_function | zinc ion binding |
| R | 0008286 | biological_process | insulin receptor signaling pathway |
| R | 0010507 | biological_process | negative regulation of autophagy |
| R | 0010508 | biological_process | positive regulation of autophagy |
| R | 0016567 | biological_process | protein ubiquitination |
| R | 0016740 | molecular_function | transferase activity |
| R | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| R | 0019221 | biological_process | cytokine-mediated signaling pathway |
| R | 0019788 | molecular_function | NEDD8 transferase activity |
| R | 0030163 | biological_process | protein catabolic process |
| R | 0030330 | biological_process | DNA damage response, signal transduction by p53 class mediator |
| R | 0030891 | cellular_component | VCB complex |
| R | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| R | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| R | 0031462 | cellular_component | Cul2-RING ubiquitin ligase complex |
| R | 0031463 | cellular_component | Cul3-RING ubiquitin ligase complex |
| R | 0031464 | cellular_component | Cul4A-RING E3 ubiquitin ligase complex |
| R | 0031465 | cellular_component | Cul4B-RING E3 ubiquitin ligase complex |
| R | 0031466 | cellular_component | Cul5-RING ubiquitin ligase complex |
| R | 0031467 | cellular_component | Cul7-RING ubiquitin ligase complex |
| R | 0031625 | molecular_function | ubiquitin protein ligase binding |
| R | 0031669 | biological_process | cellular response to nutrient levels |
| R | 0032435 | biological_process | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
| R | 0032436 | biological_process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
| R | 0032480 | biological_process | negative regulation of type I interferon production |
| R | 0032481 | biological_process | positive regulation of type I interferon production |
| R | 0032869 | biological_process | cellular response to insulin stimulus |
| R | 0034198 | biological_process | cellular response to amino acid starvation |
| R | 0034450 | molecular_function | ubiquitin-ubiquitin ligase activity |
| R | 0034599 | biological_process | cellular response to oxidative stress |
| R | 0034644 | biological_process | cellular response to UV |
| R | 0035279 | biological_process | miRNA-mediated gene silencing by mRNA destabilization |
| R | 0038066 | biological_process | p38MAPK cascade |
| R | 0038202 | biological_process | TORC1 signaling |
| R | 0042110 | biological_process | T cell activation |
| R | 0042770 | biological_process | signal transduction in response to DNA damage |
| R | 0043123 | biological_process | positive regulation of canonical NF-kappaB signal transduction |
| R | 0043124 | biological_process | negative regulation of canonical NF-kappaB signal transduction |
| R | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| R | 0043687 | biological_process | post-translational protein modification |
| R | 0044877 | molecular_function | protein-containing complex binding |
| R | 0045116 | biological_process | protein neddylation |
| R | 0045727 | biological_process | positive regulation of translation |
| R | 0045732 | biological_process | positive regulation of protein catabolic process |
| R | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| R | 0046627 | biological_process | negative regulation of insulin receptor signaling pathway |
| R | 0046872 | molecular_function | metal ion binding |
| R | 0060090 | molecular_function | molecular adaptor activity |
| R | 0060337 | biological_process | type I interferon-mediated signaling pathway |
| R | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| R | 0061630 | molecular_function | ubiquitin protein ligase activity |
| R | 0061663 | molecular_function | NEDD8 ligase activity |
| R | 0062197 | biological_process | cellular response to chemical stress |
| R | 0070294 | biological_process | renal sodium ion absorption |
| R | 0070936 | biological_process | protein K48-linked ubiquitination |
| R | 0071230 | biological_process | cellular response to amino acid stimulus |
| R | 0080008 | cellular_component | Cul4-RING E3 ubiquitin ligase complex |
| R | 0090090 | biological_process | negative regulation of canonical Wnt signaling pathway |
| R | 0090734 | cellular_component | site of DNA damage |
| R | 0097510 | biological_process | base-excision repair, AP site formation via deaminated base removal |
| R | 0097602 | molecular_function | cullin family protein binding |
| R | 0140627 | biological_process | ubiquitin-dependent protein catabolic process via the C-end degron rule pathway |
| R | 0160240 | biological_process | RNA polymerase II transcription initiation surveillance |
| R | 1900076 | biological_process | regulation of cellular response to insulin stimulus |
| R | 1901525 | biological_process | negative regulation of mitophagy |
| R | 1901797 | biological_process | negative regulation of signal transduction by p53 class mediator |
| R | 1902499 | biological_process | positive regulation of protein autoubiquitination |
| R | 1902883 | biological_process | negative regulation of response to oxidative stress |
| R | 1904037 | biological_process | positive regulation of epithelial cell apoptotic process |
| R | 1904262 | biological_process | negative regulation of TORC1 signaling |
| R | 1904263 | biological_process | positive regulation of TORC1 signaling |
| R | 2000059 | biological_process | negative regulation of ubiquitin-dependent protein catabolic process |
| S | 0000209 | biological_process | protein polyubiquitination |
| S | 0005515 | molecular_function | protein binding |
| S | 0005634 | cellular_component | nucleus |
| S | 0005654 | cellular_component | nucleoplasm |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005813 | cellular_component | centrosome |
| S | 0005829 | cellular_component | cytosol |
| S | 0006338 | biological_process | chromatin remodeling |
| S | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| S | 0006513 | biological_process | protein monoubiquitination |
| S | 0006915 | biological_process | apoptotic process |
| S | 0008013 | molecular_function | beta-catenin binding |
| S | 0016567 | biological_process | protein ubiquitination |
| S | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| S | 0019904 | molecular_function | protein domain specific binding |
| S | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| S | 0031467 | cellular_component | Cul7-RING ubiquitin ligase complex |
| S | 0031519 | cellular_component | PcG protein complex |
| S | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| S | 0051457 | biological_process | maintenance of protein location in nucleus |
| S | 0061564 | biological_process | axon development |
| S | 0070936 | biological_process | protein K48-linked ubiquitination |
| S | 0097602 | molecular_function | cullin family protein binding |
| S | 0140677 | molecular_function | molecular function activator activity |
| S | 0160072 | molecular_function | ubiquitin ligase complex scaffold activity |
| S | 1904037 | biological_process | positive regulation of epithelial cell apoptotic process |
| S | 1990444 | molecular_function | F-box domain binding |
| S | 1990756 | molecular_function | ubiquitin-like ligase-substrate adaptor activity |
| S | 1990757 | molecular_function | ubiquitin ligase activator activity |
