Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

7YML

Structure of photosynthetic LH1-RC super-complex of Rhodobacter capsulatus

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005886	cellular_component	plasma membrane
A	0016020	cellular_component	membrane
A	0019684	biological_process	photosynthesis, light reaction
A	0019866	cellular_component	organelle inner membrane
A	0030076	cellular_component	light-harvesting complex
A	0030077	cellular_component	plasma membrane light-harvesting complex
A	0042314	molecular_function	bacteriochlorophyll binding
A	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
A	0046872	molecular_function	metal ion binding
B	0005886	cellular_component	plasma membrane
B	0016020	cellular_component	membrane
B	0019684	biological_process	photosynthesis, light reaction
B	0030076	cellular_component	light-harvesting complex
B	0030077	cellular_component	plasma membrane light-harvesting complex
B	0042314	molecular_function	bacteriochlorophyll binding
B	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
B	0046872	molecular_function	metal ion binding
D	0005886	cellular_component	plasma membrane
D	0016020	cellular_component	membrane
D	0019684	biological_process	photosynthesis, light reaction
D	0019866	cellular_component	organelle inner membrane
D	0030076	cellular_component	light-harvesting complex
D	0030077	cellular_component	plasma membrane light-harvesting complex
D	0042314	molecular_function	bacteriochlorophyll binding
D	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
D	0046872	molecular_function	metal ion binding
E	0005886	cellular_component	plasma membrane
E	0016020	cellular_component	membrane
E	0019684	biological_process	photosynthesis, light reaction
E	0030076	cellular_component	light-harvesting complex
E	0030077	cellular_component	plasma membrane light-harvesting complex
E	0042314	molecular_function	bacteriochlorophyll binding
E	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
E	0046872	molecular_function	metal ion binding
F	0005886	cellular_component	plasma membrane
F	0016020	cellular_component	membrane
F	0019684	biological_process	photosynthesis, light reaction
F	0019866	cellular_component	organelle inner membrane
F	0030076	cellular_component	light-harvesting complex
F	0030077	cellular_component	plasma membrane light-harvesting complex
F	0042314	molecular_function	bacteriochlorophyll binding
F	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
F	0046872	molecular_function	metal ion binding
G	0005886	cellular_component	plasma membrane
G	0016020	cellular_component	membrane
G	0019684	biological_process	photosynthesis, light reaction
G	0030076	cellular_component	light-harvesting complex
G	0030077	cellular_component	plasma membrane light-harvesting complex
G	0042314	molecular_function	bacteriochlorophyll binding
G	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
G	0046872	molecular_function	metal ion binding
H	0015979	biological_process	photosynthesis
H	0016020	cellular_component	membrane
H	0019684	biological_process	photosynthesis, light reaction
H	0030077	cellular_component	plasma membrane light-harvesting complex
H	0042314	molecular_function	bacteriochlorophyll binding
H	0042717	cellular_component	plasma membrane-derived chromatophore membrane
H	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
I	0005886	cellular_component	plasma membrane
I	0016020	cellular_component	membrane
I	0019684	biological_process	photosynthesis, light reaction
I	0019866	cellular_component	organelle inner membrane
I	0030076	cellular_component	light-harvesting complex
I	0030077	cellular_component	plasma membrane light-harvesting complex
I	0042314	molecular_function	bacteriochlorophyll binding
I	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
I	0046872	molecular_function	metal ion binding
J	0005886	cellular_component	plasma membrane
J	0016020	cellular_component	membrane
J	0019684	biological_process	photosynthesis, light reaction
J	0030076	cellular_component	light-harvesting complex
J	0030077	cellular_component	plasma membrane light-harvesting complex
J	0042314	molecular_function	bacteriochlorophyll binding
J	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
J	0046872	molecular_function	metal ion binding
K	0005886	cellular_component	plasma membrane
K	0016020	cellular_component	membrane
K	0019684	biological_process	photosynthesis, light reaction
K	0019866	cellular_component	organelle inner membrane
K	0030076	cellular_component	light-harvesting complex
K	0030077	cellular_component	plasma membrane light-harvesting complex
K	0042314	molecular_function	bacteriochlorophyll binding
K	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
K	0046872	molecular_function	metal ion binding
L	0009772	biological_process	photosynthetic electron transport in photosystem II
L	0015979	biological_process	photosynthesis
L	0016020	cellular_component	membrane
L	0019684	biological_process	photosynthesis, light reaction
L	0030077	cellular_component	plasma membrane light-harvesting complex
L	0042314	molecular_function	bacteriochlorophyll binding
L	0042717	cellular_component	plasma membrane-derived chromatophore membrane
L	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
L	0046872	molecular_function	metal ion binding
M	0009772	biological_process	photosynthetic electron transport in photosystem II
M	0015979	biological_process	photosynthesis
M	0016020	cellular_component	membrane
M	0019684	biological_process	photosynthesis, light reaction
M	0030077	cellular_component	plasma membrane light-harvesting complex
M	0042314	molecular_function	bacteriochlorophyll binding
M	0042717	cellular_component	plasma membrane-derived chromatophore membrane
M	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
M	0046872	molecular_function	metal ion binding
N	0005886	cellular_component	plasma membrane
N	0016020	cellular_component	membrane
N	0019684	biological_process	photosynthesis, light reaction
N	0030076	cellular_component	light-harvesting complex
N	0030077	cellular_component	plasma membrane light-harvesting complex
N	0042314	molecular_function	bacteriochlorophyll binding
N	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
N	0046872	molecular_function	metal ion binding
O	0005886	cellular_component	plasma membrane
O	0016020	cellular_component	membrane
O	0019684	biological_process	photosynthesis, light reaction
O	0019866	cellular_component	organelle inner membrane
O	0030076	cellular_component	light-harvesting complex
O	0030077	cellular_component	plasma membrane light-harvesting complex
O	0042314	molecular_function	bacteriochlorophyll binding
O	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
O	0046872	molecular_function	metal ion binding
P	0005886	cellular_component	plasma membrane
P	0016020	cellular_component	membrane
P	0019684	biological_process	photosynthesis, light reaction
P	0030076	cellular_component	light-harvesting complex
P	0030077	cellular_component	plasma membrane light-harvesting complex
P	0042314	molecular_function	bacteriochlorophyll binding
P	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
P	0046872	molecular_function	metal ion binding
Q	0005886	cellular_component	plasma membrane
Q	0016020	cellular_component	membrane
Q	0019684	biological_process	photosynthesis, light reaction
Q	0019866	cellular_component	organelle inner membrane
Q	0030076	cellular_component	light-harvesting complex
Q	0030077	cellular_component	plasma membrane light-harvesting complex
Q	0042314	molecular_function	bacteriochlorophyll binding
Q	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Q	0046872	molecular_function	metal ion binding
R	0005886	cellular_component	plasma membrane
R	0016020	cellular_component	membrane
R	0019684	biological_process	photosynthesis, light reaction
R	0030076	cellular_component	light-harvesting complex
R	0030077	cellular_component	plasma membrane light-harvesting complex
R	0042314	molecular_function	bacteriochlorophyll binding
R	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
R	0046872	molecular_function	metal ion binding
S	0005886	cellular_component	plasma membrane
S	0016020	cellular_component	membrane
S	0019684	biological_process	photosynthesis, light reaction
S	0019866	cellular_component	organelle inner membrane
S	0030076	cellular_component	light-harvesting complex
S	0030077	cellular_component	plasma membrane light-harvesting complex
S	0042314	molecular_function	bacteriochlorophyll binding
S	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
S	0046872	molecular_function	metal ion binding
T	0005886	cellular_component	plasma membrane
T	0016020	cellular_component	membrane
T	0019684	biological_process	photosynthesis, light reaction
T	0030076	cellular_component	light-harvesting complex
T	0030077	cellular_component	plasma membrane light-harvesting complex
T	0042314	molecular_function	bacteriochlorophyll binding
T	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
T	0046872	molecular_function	metal ion binding
V	0005886	cellular_component	plasma membrane
V	0016020	cellular_component	membrane
V	0019684	biological_process	photosynthesis, light reaction
V	0019866	cellular_component	organelle inner membrane
V	0030076	cellular_component	light-harvesting complex
V	0030077	cellular_component	plasma membrane light-harvesting complex
V	0042314	molecular_function	bacteriochlorophyll binding
V	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
V	0046872	molecular_function	metal ion binding
W	0005886	cellular_component	plasma membrane
W	0016020	cellular_component	membrane
W	0019684	biological_process	photosynthesis, light reaction
W	0030076	cellular_component	light-harvesting complex
W	0030077	cellular_component	plasma membrane light-harvesting complex
W	0042314	molecular_function	bacteriochlorophyll binding
W	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
W	0046872	molecular_function	metal ion binding
X	0005886	cellular_component	plasma membrane
X	0015979	biological_process	photosynthesis
Y	0005886	cellular_component	plasma membrane
Y	0016020	cellular_component	membrane
Y	0019684	biological_process	photosynthesis, light reaction
Y	0019866	cellular_component	organelle inner membrane
Y	0030076	cellular_component	light-harvesting complex
Y	0030077	cellular_component	plasma membrane light-harvesting complex
Y	0042314	molecular_function	bacteriochlorophyll binding
Y	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Y	0046872	molecular_function	metal ion binding
Z	0005886	cellular_component	plasma membrane
Z	0016020	cellular_component	membrane
Z	0019684	biological_process	photosynthesis, light reaction
Z	0030076	cellular_component	light-harvesting complex
Z	0030077	cellular_component	plasma membrane light-harvesting complex
Z	0042314	molecular_function	bacteriochlorophyll binding
Z	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Z	0046872	molecular_function	metal ion binding

Functional Information from PROSITE/UniProt

site_id	PS00244
Number of Residues	27
Details	REACTION_CENTER Photosynthetic reaction center proteins signature. NlfynPfHglSiaalygsallfAmHGA

Chain	Residue	Details
M	ASN194-ALA220
L	ASN167-ALA193

site_id	PS00968
Number of Residues	19
Details	ANTENNA_COMP_ALPHA Antenna complexes alpha subunits signature. LlAVlIHlilLSTpafNWL

Chain	Residue	Details
A	LEU26-LEU44

site_id	PS00969
Number of Residues	32
Details	ANTENNA_COMP_BETA Antenna complexes beta subunits signature. QaqelHavymsGlsaFiavAvlAHlavmiwrP

Chain	Residue	Details
B	GLN15-PRO46

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	134
Details	TRANSMEM: Helical

Chain	Residue	Details
M	LEU52-ALA78
Z	ALA1-ALA21
M	GLN110-LEU139
M	GLY142-MET167
M	TYR197-VAL225
M	ALA259-LEU285
P	ALA1-ALA21
R	ALA1-ALA21
T	ALA1-ALA21
W	ALA1-ALA21

site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: axial binding residue

Chain	Residue	Details
M	HIS181
Z	VAL22-TRP44
M	HIS201
G	VAL22-TRP44
J	VAL22-TRP44
N	VAL22-TRP44
P	VAL22-TRP44
R	VAL22-TRP44
T	VAL22-TRP44
W	VAL22-TRP44

site_id	SWS_FT_FI3
Number of Residues	4
Details	BINDING:

Chain	Residue	Details
M	HIS218
Z	ARG45-PHE48
M	GLU233
M	TRP251
M	HIS265
N	ARG45-PHE48
P	ARG45-PHE48
R	ARG45-PHE48
T	ARG45-PHE48
W	ARG45-PHE48

site_id	SWS_FT_FI4
Number of Residues	3
Details	BINDING:

Chain	Residue	Details
L	HIS191
N	HIS38
P	HIS20
P	HIS38
R	HIS20
R	HIS38
T	HIS20
T	HIS38
W	HIS20
W	HIS38
Z	HIS20
L	PHE217
Z	HIS38
L	HIS231
E	HIS38
G	HIS20
G	HIS38
J	HIS20
J	HIS38
N	HIS20

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)