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7YK5

Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004497molecular_functionmonooxygenase activity
A0009507cellular_componentchloroplast
A0015977biological_processcarbon fixation
A0015979biological_processphotosynthesis
A0016829molecular_functionlyase activity
A0016984molecular_functionribulose-bisphosphate carboxylase activity
A0019253biological_processreductive pentose-phosphate cycle
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0004497molecular_functionmonooxygenase activity
B0009507cellular_componentchloroplast
B0015977biological_processcarbon fixation
B0015979biological_processphotosynthesis
B0016829molecular_functionlyase activity
B0016984molecular_functionribulose-bisphosphate carboxylase activity
B0019253biological_processreductive pentose-phosphate cycle
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0004497molecular_functionmonooxygenase activity
C0009507cellular_componentchloroplast
C0015977biological_processcarbon fixation
C0015979biological_processphotosynthesis
C0016829molecular_functionlyase activity
C0016984molecular_functionribulose-bisphosphate carboxylase activity
C0019253biological_processreductive pentose-phosphate cycle
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0004497molecular_functionmonooxygenase activity
D0009507cellular_componentchloroplast
D0015977biological_processcarbon fixation
D0015979biological_processphotosynthesis
D0016829molecular_functionlyase activity
D0016984molecular_functionribulose-bisphosphate carboxylase activity
D0019253biological_processreductive pentose-phosphate cycle
D0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0004497molecular_functionmonooxygenase activity
E0009507cellular_componentchloroplast
E0015977biological_processcarbon fixation
E0015979biological_processphotosynthesis
E0016829molecular_functionlyase activity
E0016984molecular_functionribulose-bisphosphate carboxylase activity
E0019253biological_processreductive pentose-phosphate cycle
E0046872molecular_functionmetal ion binding
F0000287molecular_functionmagnesium ion binding
F0004497molecular_functionmonooxygenase activity
F0009507cellular_componentchloroplast
F0015977biological_processcarbon fixation
F0015979biological_processphotosynthesis
F0016829molecular_functionlyase activity
F0016984molecular_functionribulose-bisphosphate carboxylase activity
F0019253biological_processreductive pentose-phosphate cycle
F0046872molecular_functionmetal ion binding
G0000287molecular_functionmagnesium ion binding
G0004497molecular_functionmonooxygenase activity
G0009507cellular_componentchloroplast
G0015977biological_processcarbon fixation
G0015979biological_processphotosynthesis
G0016829molecular_functionlyase activity
G0016984molecular_functionribulose-bisphosphate carboxylase activity
G0019253biological_processreductive pentose-phosphate cycle
G0046872molecular_functionmetal ion binding
H0000287molecular_functionmagnesium ion binding
H0004497molecular_functionmonooxygenase activity
H0009507cellular_componentchloroplast
H0015977biological_processcarbon fixation
H0015979biological_processphotosynthesis
H0016829molecular_functionlyase activity
H0016984molecular_functionribulose-bisphosphate carboxylase activity
H0019253biological_processreductive pentose-phosphate cycle
H0046872molecular_functionmetal ion binding
I0009507cellular_componentchloroplast
I0015977biological_processcarbon fixation
I0015979biological_processphotosynthesis
I0016984molecular_functionribulose-bisphosphate carboxylase activity
I0019253biological_processreductive pentose-phosphate cycle
J0009507cellular_componentchloroplast
J0015977biological_processcarbon fixation
J0015979biological_processphotosynthesis
J0016984molecular_functionribulose-bisphosphate carboxylase activity
J0019253biological_processreductive pentose-phosphate cycle
K0009507cellular_componentchloroplast
K0015977biological_processcarbon fixation
K0015979biological_processphotosynthesis
K0016984molecular_functionribulose-bisphosphate carboxylase activity
K0019253biological_processreductive pentose-phosphate cycle
L0009507cellular_componentchloroplast
L0015977biological_processcarbon fixation
L0015979biological_processphotosynthesis
L0016984molecular_functionribulose-bisphosphate carboxylase activity
L0019253biological_processreductive pentose-phosphate cycle
M0009507cellular_componentchloroplast
M0015977biological_processcarbon fixation
M0015979biological_processphotosynthesis
M0016984molecular_functionribulose-bisphosphate carboxylase activity
M0019253biological_processreductive pentose-phosphate cycle
N0009507cellular_componentchloroplast
N0015977biological_processcarbon fixation
N0015979biological_processphotosynthesis
N0016984molecular_functionribulose-bisphosphate carboxylase activity
N0019253biological_processreductive pentose-phosphate cycle
O0009507cellular_componentchloroplast
O0015977biological_processcarbon fixation
O0015979biological_processphotosynthesis
O0016984molecular_functionribulose-bisphosphate carboxylase activity
O0019253biological_processreductive pentose-phosphate cycle
P0009507cellular_componentchloroplast
P0015977biological_processcarbon fixation
P0015979biological_processphotosynthesis
P0016984molecular_functionribulose-bisphosphate carboxylase activity
P0019253biological_processreductive pentose-phosphate cycle
Functional Information from PROSITE/UniProt
site_idPS00157
Number of Residues9
DetailsRUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFlKdDE
ChainResidueDetails
AGLY200-GLU208

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS179
EHIS297
FLYS179
FHIS297
GLYS179
GHIS297
HLYS179
HHIS297
AHIS297
BLYS179
BHIS297
CLYS179
CHIS297
DLYS179
DHIS297
ELYS179

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: in homodimeric partner => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
AASN127
BASN127
CASN127
DASN127
EASN127
FASN127
GASN127
HASN127

site_idSWS_FT_FI3
Number of Residues56
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ATHR177
BASP207
BGLU208
BARG298
BHIS330
BSER382
CTHR177
CLYS181
CASP207
CGLU208
CARG298
ALYS181
CHIS330
CSER382
DTHR177
DLYS181
DASP207
DGLU208
DARG298
DHIS330
DSER382
ETHR177
AASP207
ELYS181
EASP207
EGLU208
EARG298
EHIS330
ESER382
FTHR177
FLYS181
FASP207
FGLU208
AGLU208
FARG298
FHIS330
FSER382
GTHR177
GLYS181
GASP207
GGLU208
GARG298
GHIS330
GSER382
AARG298
HTHR177
HLYS181
HASP207
HGLU208
HARG298
HHIS330
HSER382
AHIS330
ASER382
BTHR177
BLYS181

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: via carbamate group => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
AKCX205
BKCX205
CKCX205
DKCX205
EKCX205
FKCX205
GKCX205
HKCX205

site_idSWS_FT_FI5
Number of Residues8
DetailsSITE: Transition state stabilizer => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS337
BLYS337
CLYS337
DLYS337
ELYS337
FLYS337
GLYS337
HLYS337

site_idSWS_FT_FI6
Number of Residues8
DetailsMOD_RES: N6-carboxylysine => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
AKCX205
BKCX205
CKCX205
DKCX205
EKCX205
FKCX205
GKCX205
HKCX205

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PDB entries from 2024-07-24

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