7XZZ

Cryo-EM structure of the nucleosome in complex with p53

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000786	cellular_component	nucleosome
A	0003677	molecular_function	DNA binding
A	0005515	molecular_function	protein binding
A	0005576	cellular_component	extracellular region
A	0005634	cellular_component	nucleus
A	0005654	cellular_component	nucleoplasm
A	0005694	cellular_component	chromosome
A	0006325	biological_process	chromatin organization
A	0006334	biological_process	nucleosome assembly
A	0016020	cellular_component	membrane
A	0030527	molecular_function	structural constituent of chromatin
A	0031492	molecular_function	nucleosomal DNA binding
A	0031507	biological_process	heterochromatin formation
A	0032200	biological_process	telomere organization
A	0032991	cellular_component	protein-containing complex
A	0040029	biological_process	epigenetic regulation of gene expression
A	0045296	molecular_function	cadherin binding
A	0046982	molecular_function	protein heterodimerization activity
A	0070062	cellular_component	extracellular exosome
B	0000781	cellular_component	chromosome, telomeric region
B	0000786	cellular_component	nucleosome
B	0003677	molecular_function	DNA binding
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005576	cellular_component	extracellular region
B	0005634	cellular_component	nucleus
B	0005654	cellular_component	nucleoplasm
B	0005694	cellular_component	chromosome
B	0006325	biological_process	chromatin organization
B	0006334	biological_process	nucleosome assembly
B	0016020	cellular_component	membrane
B	0030527	molecular_function	structural constituent of chromatin
B	0032200	biological_process	telomere organization
B	0032991	cellular_component	protein-containing complex
B	0045653	biological_process	negative regulation of megakaryocyte differentiation
B	0046982	molecular_function	protein heterodimerization activity
B	0061644	biological_process	protein localization to CENP-A containing chromatin
B	0070062	cellular_component	extracellular exosome
C	0000786	cellular_component	nucleosome
C	0003677	molecular_function	DNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005654	cellular_component	nucleoplasm
C	0005694	cellular_component	chromosome
C	0006325	biological_process	chromatin organization
C	0008285	biological_process	negative regulation of cell population proliferation
C	0030527	molecular_function	structural constituent of chromatin
C	0031507	biological_process	heterochromatin formation
C	0046982	molecular_function	protein heterodimerization activity
C	0061644	biological_process	protein localization to CENP-A containing chromatin
C	0070062	cellular_component	extracellular exosome
D	0000786	cellular_component	nucleosome
D	0001530	molecular_function	lipopolysaccharide binding
D	0002227	biological_process	innate immune response in mucosa
D	0003677	molecular_function	DNA binding
D	0005515	molecular_function	protein binding
D	0005615	cellular_component	extracellular space
D	0005634	cellular_component	nucleus
D	0005654	cellular_component	nucleoplasm
D	0005694	cellular_component	chromosome
D	0005886	cellular_component	plasma membrane
D	0006325	biological_process	chromatin organization
D	0006334	biological_process	nucleosome assembly
D	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
D	0019731	biological_process	antibacterial humoral response
D	0030527	molecular_function	structural constituent of chromatin
D	0031640	biological_process	killing of cells of another organism
D	0042742	biological_process	defense response to bacterium
D	0046982	molecular_function	protein heterodimerization activity
D	0050829	biological_process	defense response to Gram-negative bacterium
D	0050830	biological_process	defense response to Gram-positive bacterium
D	0061644	biological_process	protein localization to CENP-A containing chromatin
D	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
E	0000786	cellular_component	nucleosome
E	0003677	molecular_function	DNA binding
E	0005515	molecular_function	protein binding
E	0005576	cellular_component	extracellular region
E	0005634	cellular_component	nucleus
E	0005654	cellular_component	nucleoplasm
E	0005694	cellular_component	chromosome
E	0006325	biological_process	chromatin organization
E	0006334	biological_process	nucleosome assembly
E	0016020	cellular_component	membrane
E	0030527	molecular_function	structural constituent of chromatin
E	0031492	molecular_function	nucleosomal DNA binding
E	0031507	biological_process	heterochromatin formation
E	0032200	biological_process	telomere organization
E	0032991	cellular_component	protein-containing complex
E	0040029	biological_process	epigenetic regulation of gene expression
E	0045296	molecular_function	cadherin binding
E	0046982	molecular_function	protein heterodimerization activity
E	0070062	cellular_component	extracellular exosome
F	0000781	cellular_component	chromosome, telomeric region
F	0000786	cellular_component	nucleosome
F	0003677	molecular_function	DNA binding
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0005576	cellular_component	extracellular region
F	0005634	cellular_component	nucleus
F	0005654	cellular_component	nucleoplasm
F	0005694	cellular_component	chromosome
F	0006325	biological_process	chromatin organization
F	0006334	biological_process	nucleosome assembly
F	0016020	cellular_component	membrane
F	0030527	molecular_function	structural constituent of chromatin
F	0032200	biological_process	telomere organization
F	0032991	cellular_component	protein-containing complex
F	0045653	biological_process	negative regulation of megakaryocyte differentiation
F	0046982	molecular_function	protein heterodimerization activity
F	0061644	biological_process	protein localization to CENP-A containing chromatin
F	0070062	cellular_component	extracellular exosome
G	0000786	cellular_component	nucleosome
G	0003677	molecular_function	DNA binding
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005654	cellular_component	nucleoplasm
G	0005694	cellular_component	chromosome
G	0006325	biological_process	chromatin organization
G	0008285	biological_process	negative regulation of cell population proliferation
G	0030527	molecular_function	structural constituent of chromatin
G	0031507	biological_process	heterochromatin formation
G	0046982	molecular_function	protein heterodimerization activity
G	0061644	biological_process	protein localization to CENP-A containing chromatin
G	0070062	cellular_component	extracellular exosome
H	0000786	cellular_component	nucleosome
H	0001530	molecular_function	lipopolysaccharide binding
H	0002227	biological_process	innate immune response in mucosa
H	0003677	molecular_function	DNA binding
H	0005515	molecular_function	protein binding
H	0005615	cellular_component	extracellular space
H	0005634	cellular_component	nucleus
H	0005654	cellular_component	nucleoplasm
H	0005694	cellular_component	chromosome
H	0005886	cellular_component	plasma membrane
H	0006325	biological_process	chromatin organization
H	0006334	biological_process	nucleosome assembly
H	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
H	0019731	biological_process	antibacterial humoral response
H	0030527	molecular_function	structural constituent of chromatin
H	0031640	biological_process	killing of cells of another organism
H	0042742	biological_process	defense response to bacterium
H	0046982	molecular_function	protein heterodimerization activity
H	0050829	biological_process	defense response to Gram-negative bacterium
H	0050830	biological_process	defense response to Gram-positive bacterium
H	0061644	biological_process	protein localization to CENP-A containing chromatin
H	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
K	0000122	biological_process	negative regulation of transcription by RNA polymerase II
K	0000785	cellular_component	chromatin
K	0000976	molecular_function	transcription cis-regulatory region binding
K	0000978	molecular_function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
K	0000981	molecular_function	DNA-binding transcription factor activity, RNA polymerase II-specific
K	0000987	molecular_function	cis-regulatory region sequence-specific DNA binding
K	0001046	molecular_function	core promoter sequence-specific DNA binding
K	0001094	molecular_function	TFIID-class transcription factor complex binding
K	0001223	molecular_function	transcription coactivator binding
K	0001227	molecular_function	DNA-binding transcription repressor activity, RNA polymerase II-specific
K	0001228	molecular_function	DNA-binding transcription activator activity, RNA polymerase II-specific
K	0002020	molecular_function	protease binding
K	0002039	molecular_function	p53 binding
K	0002244	biological_process	hematopoietic progenitor cell differentiation
K	0003677	molecular_function	DNA binding
K	0003682	molecular_function	chromatin binding
K	0003700	molecular_function	DNA-binding transcription factor activity
K	0003730	molecular_function	mRNA 3'-UTR binding
K	0005507	molecular_function	copper ion binding
K	0005515	molecular_function	protein binding
K	0005634	cellular_component	nucleus
K	0005654	cellular_component	nucleoplasm
K	0005667	cellular_component	transcription regulator complex
K	0005730	cellular_component	nucleolus
K	0005737	cellular_component	cytoplasm
K	0005739	cellular_component	mitochondrion
K	0005759	cellular_component	mitochondrial matrix
K	0005783	cellular_component	endoplasmic reticulum
K	0005813	cellular_component	centrosome
K	0005829	cellular_component	cytosol
K	0006289	biological_process	nucleotide-excision repair
K	0006351	biological_process	DNA-templated transcription
K	0006355	biological_process	regulation of DNA-templated transcription
K	0006357	biological_process	regulation of transcription by RNA polymerase II
K	0006914	biological_process	autophagy
K	0006915	biological_process	apoptotic process
K	0006974	biological_process	DNA damage response
K	0006979	biological_process	response to oxidative stress
K	0006983	biological_process	ER overload response
K	0007265	biological_process	Ras protein signal transduction
K	0007623	biological_process	circadian rhythm
K	0008104	biological_process	intracellular protein localization
K	0008270	molecular_function	zinc ion binding
K	0008285	biological_process	negative regulation of cell population proliferation
K	0008340	biological_process	determination of adult lifespan
K	0009299	biological_process	mRNA transcription
K	0009410	biological_process	response to xenobiotic stimulus
K	0009411	biological_process	response to UV
K	0010212	biological_process	response to ionizing radiation
K	0010332	biological_process	response to gamma radiation
K	0010628	biological_process	positive regulation of gene expression
K	0012501	biological_process	programmed cell death
K	0016032	biological_process	viral process
K	0016363	cellular_component	nuclear matrix
K	0016604	cellular_component	nuclear body
K	0016605	cellular_component	PML body
K	0019899	molecular_function	enzyme binding
K	0030308	biological_process	negative regulation of cell growth
K	0030330	biological_process	DNA damage response, signal transduction by p53 class mediator
K	0030971	molecular_function	receptor tyrosine kinase binding
K	0031571	biological_process	mitotic G1 DNA damage checkpoint signaling
K	0031625	molecular_function	ubiquitin protein ligase binding
K	0032211	biological_process	negative regulation of telomere maintenance via telomerase
K	0032991	cellular_component	protein-containing complex
K	0033209	biological_process	tumor necrosis factor-mediated signaling pathway
K	0034644	biological_process	cellular response to UV
K	0036310	molecular_function	ATP-dependent DNA/DNA annealing activity
K	0042149	biological_process	cellular response to glucose starvation
K	0042771	biological_process	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
K	0042802	molecular_function	identical protein binding
K	0042826	molecular_function	histone deacetylase binding
K	0042981	biological_process	regulation of apoptotic process
K	0043065	biological_process	positive regulation of apoptotic process
K	0043066	biological_process	negative regulation of apoptotic process
K	0043153	biological_process	entrainment of circadian clock by photoperiod
K	0043621	molecular_function	obsolete protein self-association
K	0045815	biological_process	transcription initiation-coupled chromatin remodeling
K	0045892	biological_process	negative regulation of DNA-templated transcription
K	0045893	biological_process	positive regulation of DNA-templated transcription
K	0045899	biological_process	positive regulation of RNA polymerase II transcription preinitiation complex assembly
K	0045944	biological_process	positive regulation of transcription by RNA polymerase II
K	0046677	biological_process	response to antibiotic
K	0046872	molecular_function	metal ion binding
K	0046982	molecular_function	protein heterodimerization activity
K	0048147	biological_process	negative regulation of fibroblast proliferation
K	0048511	biological_process	rhythmic process
K	0048512	biological_process	circadian behavior
K	0048539	biological_process	bone marrow development
K	0051053	biological_process	negative regulation of DNA metabolic process
K	0051087	molecular_function	protein-folding chaperone binding
K	0051097	biological_process	negative regulation of helicase activity
K	0051262	biological_process	protein tetramerization
K	0051721	molecular_function	protein phosphatase 2A binding
K	0051726	biological_process	regulation of cell cycle
K	0060218	biological_process	hematopoietic stem cell differentiation
K	0060333	biological_process	type II interferon-mediated signaling pathway
K	0061629	molecular_function	RNA polymerase II-specific DNA-binding transcription factor binding
K	0062100	biological_process	positive regulation of programmed necrotic cell death
K	0065003	biological_process	protein-containing complex assembly
K	0070059	biological_process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
K	0070245	biological_process	positive regulation of thymocyte apoptotic process
K	0071456	biological_process	cellular response to hypoxia
K	0071466	biological_process	cellular response to xenobiotic stimulus
K	0071479	biological_process	cellular response to ionizing radiation
K	0071480	biological_process	cellular response to gamma radiation
K	0071889	molecular_function	14-3-3 protein binding
K	0072331	biological_process	signal transduction by p53 class mediator
K	0072332	biological_process	intrinsic apoptotic signaling pathway by p53 class mediator
K	0072717	biological_process	cellular response to actinomycin D
K	0090200	biological_process	positive regulation of release of cytochrome c from mitochondria
K	0090398	biological_process	cellular senescence
K	0090399	biological_process	replicative senescence
K	0090403	biological_process	oxidative stress-induced premature senescence
K	0097190	biological_process	apoptotic signaling pathway
K	0097193	biological_process	intrinsic apoptotic signaling pathway
K	0097252	biological_process	oligodendrocyte apoptotic process
K	0097371	molecular_function	MDM2/MDM4 family protein binding
K	0097718	molecular_function	disordered domain specific binding
K	0140296	molecular_function	general transcription initiation factor binding
K	0140677	molecular_function	molecular function activator activity
K	0140693	molecular_function	molecular condensate scaffold activity
K	1900119	biological_process	positive regulation of execution phase of apoptosis
K	1902749	biological_process	regulation of cell cycle G2/M phase transition
K	1902895	biological_process	positive regulation of miRNA transcription
K	1903451	biological_process	negative regulation of G1 to G0 transition
K	1905856	biological_process	negative regulation of pentose-phosphate shunt
K	1990841	molecular_function	promoter-specific chromatin binding
K	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
K	2000774	biological_process	positive regulation of cellular senescence
K	2001242	biological_process	regulation of intrinsic apoptotic signaling pathway
K	2001244	biological_process	positive regulation of intrinsic apoptotic signaling pathway
L	0000122	biological_process	negative regulation of transcription by RNA polymerase II
L	0000785	cellular_component	chromatin
L	0000976	molecular_function	transcription cis-regulatory region binding
L	0000978	molecular_function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
L	0000981	molecular_function	DNA-binding transcription factor activity, RNA polymerase II-specific
L	0000987	molecular_function	cis-regulatory region sequence-specific DNA binding
L	0001046	molecular_function	core promoter sequence-specific DNA binding
L	0001094	molecular_function	TFIID-class transcription factor complex binding
L	0001223	molecular_function	transcription coactivator binding
L	0001227	molecular_function	DNA-binding transcription repressor activity, RNA polymerase II-specific
L	0001228	molecular_function	DNA-binding transcription activator activity, RNA polymerase II-specific
L	0002020	molecular_function	protease binding
L	0002039	molecular_function	p53 binding
L	0002244	biological_process	hematopoietic progenitor cell differentiation
L	0003677	molecular_function	DNA binding
L	0003682	molecular_function	chromatin binding
L	0003700	molecular_function	DNA-binding transcription factor activity
L	0003730	molecular_function	mRNA 3'-UTR binding
L	0005507	molecular_function	copper ion binding
L	0005515	molecular_function	protein binding
L	0005634	cellular_component	nucleus
L	0005654	cellular_component	nucleoplasm
L	0005667	cellular_component	transcription regulator complex
L	0005730	cellular_component	nucleolus
L	0005737	cellular_component	cytoplasm
L	0005739	cellular_component	mitochondrion
L	0005759	cellular_component	mitochondrial matrix
L	0005783	cellular_component	endoplasmic reticulum
L	0005813	cellular_component	centrosome
L	0005829	cellular_component	cytosol
L	0006289	biological_process	nucleotide-excision repair
L	0006351	biological_process	DNA-templated transcription
L	0006355	biological_process	regulation of DNA-templated transcription
L	0006357	biological_process	regulation of transcription by RNA polymerase II
L	0006914	biological_process	autophagy
L	0006915	biological_process	apoptotic process
L	0006974	biological_process	DNA damage response
L	0006979	biological_process	response to oxidative stress
L	0006983	biological_process	ER overload response
L	0007265	biological_process	Ras protein signal transduction
L	0007623	biological_process	circadian rhythm
L	0008104	biological_process	intracellular protein localization
L	0008270	molecular_function	zinc ion binding
L	0008285	biological_process	negative regulation of cell population proliferation
L	0008340	biological_process	determination of adult lifespan
L	0009299	biological_process	mRNA transcription
L	0009410	biological_process	response to xenobiotic stimulus
L	0009411	biological_process	response to UV
L	0010212	biological_process	response to ionizing radiation
L	0010332	biological_process	response to gamma radiation
L	0010628	biological_process	positive regulation of gene expression
L	0012501	biological_process	programmed cell death
L	0016032	biological_process	viral process
L	0016363	cellular_component	nuclear matrix
L	0016604	cellular_component	nuclear body
L	0016605	cellular_component	PML body
L	0019899	molecular_function	enzyme binding
L	0030308	biological_process	negative regulation of cell growth
L	0030330	biological_process	DNA damage response, signal transduction by p53 class mediator
L	0030971	molecular_function	receptor tyrosine kinase binding
L	0031571	biological_process	mitotic G1 DNA damage checkpoint signaling
L	0031625	molecular_function	ubiquitin protein ligase binding
L	0032211	biological_process	negative regulation of telomere maintenance via telomerase
L	0032991	cellular_component	protein-containing complex
L	0033209	biological_process	tumor necrosis factor-mediated signaling pathway
L	0034644	biological_process	cellular response to UV
L	0036310	molecular_function	ATP-dependent DNA/DNA annealing activity
L	0042149	biological_process	cellular response to glucose starvation
L	0042771	biological_process	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
L	0042802	molecular_function	identical protein binding
L	0042826	molecular_function	histone deacetylase binding
L	0042981	biological_process	regulation of apoptotic process
L	0043065	biological_process	positive regulation of apoptotic process
L	0043066	biological_process	negative regulation of apoptotic process
L	0043153	biological_process	entrainment of circadian clock by photoperiod
L	0043621	molecular_function	obsolete protein self-association
L	0045815	biological_process	transcription initiation-coupled chromatin remodeling
L	0045892	biological_process	negative regulation of DNA-templated transcription
L	0045893	biological_process	positive regulation of DNA-templated transcription
L	0045899	biological_process	positive regulation of RNA polymerase II transcription preinitiation complex assembly
L	0045944	biological_process	positive regulation of transcription by RNA polymerase II
L	0046677	biological_process	response to antibiotic
L	0046872	molecular_function	metal ion binding
L	0046982	molecular_function	protein heterodimerization activity
L	0048147	biological_process	negative regulation of fibroblast proliferation
L	0048511	biological_process	rhythmic process
L	0048512	biological_process	circadian behavior
L	0048539	biological_process	bone marrow development
L	0051053	biological_process	negative regulation of DNA metabolic process
L	0051087	molecular_function	protein-folding chaperone binding
L	0051097	biological_process	negative regulation of helicase activity
L	0051262	biological_process	protein tetramerization
L	0051721	molecular_function	protein phosphatase 2A binding
L	0051726	biological_process	regulation of cell cycle
L	0060218	biological_process	hematopoietic stem cell differentiation
L	0060333	biological_process	type II interferon-mediated signaling pathway
L	0061629	molecular_function	RNA polymerase II-specific DNA-binding transcription factor binding
L	0062100	biological_process	positive regulation of programmed necrotic cell death
L	0065003	biological_process	protein-containing complex assembly
L	0070059	biological_process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
L	0070245	biological_process	positive regulation of thymocyte apoptotic process
L	0071456	biological_process	cellular response to hypoxia
L	0071466	biological_process	cellular response to xenobiotic stimulus
L	0071479	biological_process	cellular response to ionizing radiation
L	0071480	biological_process	cellular response to gamma radiation
L	0071889	molecular_function	14-3-3 protein binding
L	0072331	biological_process	signal transduction by p53 class mediator
L	0072332	biological_process	intrinsic apoptotic signaling pathway by p53 class mediator
L	0072717	biological_process	cellular response to actinomycin D
L	0090200	biological_process	positive regulation of release of cytochrome c from mitochondria
L	0090398	biological_process	cellular senescence
L	0090399	biological_process	replicative senescence
L	0090403	biological_process	oxidative stress-induced premature senescence
L	0097190	biological_process	apoptotic signaling pathway
L	0097193	biological_process	intrinsic apoptotic signaling pathway
L	0097252	biological_process	oligodendrocyte apoptotic process
L	0097371	molecular_function	MDM2/MDM4 family protein binding
L	0097718	molecular_function	disordered domain specific binding
L	0140296	molecular_function	general transcription initiation factor binding
L	0140677	molecular_function	molecular function activator activity
L	0140693	molecular_function	molecular condensate scaffold activity
L	1900119	biological_process	positive regulation of execution phase of apoptosis
L	1902749	biological_process	regulation of cell cycle G2/M phase transition
L	1902895	biological_process	positive regulation of miRNA transcription
L	1903451	biological_process	negative regulation of G1 to G0 transition
L	1905856	biological_process	negative regulation of pentose-phosphate shunt
L	1990841	molecular_function	promoter-specific chromatin binding
L	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
L	2000774	biological_process	positive regulation of cellular senescence
L	2001242	biological_process	regulation of intrinsic apoptotic signaling pathway
L	2001244	biological_process	positive regulation of intrinsic apoptotic signaling pathway
M	0000122	biological_process	negative regulation of transcription by RNA polymerase II
M	0000785	cellular_component	chromatin
M	0000976	molecular_function	transcription cis-regulatory region binding
M	0000978	molecular_function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
M	0000981	molecular_function	DNA-binding transcription factor activity, RNA polymerase II-specific
M	0000987	molecular_function	cis-regulatory region sequence-specific DNA binding
M	0001046	molecular_function	core promoter sequence-specific DNA binding
M	0001094	molecular_function	TFIID-class transcription factor complex binding
M	0001223	molecular_function	transcription coactivator binding
M	0001227	molecular_function	DNA-binding transcription repressor activity, RNA polymerase II-specific
M	0001228	molecular_function	DNA-binding transcription activator activity, RNA polymerase II-specific
M	0002020	molecular_function	protease binding
M	0002039	molecular_function	p53 binding
M	0002244	biological_process	hematopoietic progenitor cell differentiation
M	0003677	molecular_function	DNA binding
M	0003682	molecular_function	chromatin binding
M	0003700	molecular_function	DNA-binding transcription factor activity
M	0003730	molecular_function	mRNA 3'-UTR binding
M	0005507	molecular_function	copper ion binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005654	cellular_component	nucleoplasm
M	0005667	cellular_component	transcription regulator complex
M	0005730	cellular_component	nucleolus
M	0005737	cellular_component	cytoplasm
M	0005739	cellular_component	mitochondrion
M	0005759	cellular_component	mitochondrial matrix
M	0005783	cellular_component	endoplasmic reticulum
M	0005813	cellular_component	centrosome
M	0005829	cellular_component	cytosol
M	0006289	biological_process	nucleotide-excision repair
M	0006351	biological_process	DNA-templated transcription
M	0006355	biological_process	regulation of DNA-templated transcription
M	0006357	biological_process	regulation of transcription by RNA polymerase II
M	0006914	biological_process	autophagy
M	0006915	biological_process	apoptotic process
M	0006974	biological_process	DNA damage response
M	0006979	biological_process	response to oxidative stress
M	0006983	biological_process	ER overload response
M	0007265	biological_process	Ras protein signal transduction
M	0007623	biological_process	circadian rhythm
M	0008104	biological_process	intracellular protein localization
M	0008270	molecular_function	zinc ion binding
M	0008285	biological_process	negative regulation of cell population proliferation
M	0008340	biological_process	determination of adult lifespan
M	0009299	biological_process	mRNA transcription
M	0009410	biological_process	response to xenobiotic stimulus
M	0009411	biological_process	response to UV
M	0010212	biological_process	response to ionizing radiation
M	0010332	biological_process	response to gamma radiation
M	0010628	biological_process	positive regulation of gene expression
M	0012501	biological_process	programmed cell death
M	0016032	biological_process	viral process
M	0016363	cellular_component	nuclear matrix
M	0016604	cellular_component	nuclear body
M	0016605	cellular_component	PML body
M	0019899	molecular_function	enzyme binding
M	0030308	biological_process	negative regulation of cell growth
M	0030330	biological_process	DNA damage response, signal transduction by p53 class mediator
M	0030971	molecular_function	receptor tyrosine kinase binding
M	0031571	biological_process	mitotic G1 DNA damage checkpoint signaling
M	0031625	molecular_function	ubiquitin protein ligase binding
M	0032211	biological_process	negative regulation of telomere maintenance via telomerase
M	0032991	cellular_component	protein-containing complex
M	0033209	biological_process	tumor necrosis factor-mediated signaling pathway
M	0034644	biological_process	cellular response to UV
M	0036310	molecular_function	ATP-dependent DNA/DNA annealing activity
M	0042149	biological_process	cellular response to glucose starvation
M	0042771	biological_process	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
M	0042802	molecular_function	identical protein binding
M	0042826	molecular_function	histone deacetylase binding
M	0042981	biological_process	regulation of apoptotic process
M	0043065	biological_process	positive regulation of apoptotic process
M	0043066	biological_process	negative regulation of apoptotic process
M	0043153	biological_process	entrainment of circadian clock by photoperiod
M	0043621	molecular_function	obsolete protein self-association
M	0045815	biological_process	transcription initiation-coupled chromatin remodeling
M	0045892	biological_process	negative regulation of DNA-templated transcription
M	0045893	biological_process	positive regulation of DNA-templated transcription
M	0045899	biological_process	positive regulation of RNA polymerase II transcription preinitiation complex assembly
M	0045944	biological_process	positive regulation of transcription by RNA polymerase II
M	0046677	biological_process	response to antibiotic
M	0046872	molecular_function	metal ion binding
M	0046982	molecular_function	protein heterodimerization activity
M	0048147	biological_process	negative regulation of fibroblast proliferation
M	0048511	biological_process	rhythmic process
M	0048512	biological_process	circadian behavior
M	0048539	biological_process	bone marrow development
M	0051053	biological_process	negative regulation of DNA metabolic process
M	0051087	molecular_function	protein-folding chaperone binding
M	0051097	biological_process	negative regulation of helicase activity
M	0051262	biological_process	protein tetramerization
M	0051721	molecular_function	protein phosphatase 2A binding
M	0051726	biological_process	regulation of cell cycle
M	0060218	biological_process	hematopoietic stem cell differentiation
M	0060333	biological_process	type II interferon-mediated signaling pathway
M	0061629	molecular_function	RNA polymerase II-specific DNA-binding transcription factor binding
M	0062100	biological_process	positive regulation of programmed necrotic cell death
M	0065003	biological_process	protein-containing complex assembly
M	0070059	biological_process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
M	0070245	biological_process	positive regulation of thymocyte apoptotic process
M	0071456	biological_process	cellular response to hypoxia
M	0071466	biological_process	cellular response to xenobiotic stimulus
M	0071479	biological_process	cellular response to ionizing radiation
M	0071480	biological_process	cellular response to gamma radiation
M	0071889	molecular_function	14-3-3 protein binding
M	0072331	biological_process	signal transduction by p53 class mediator
M	0072332	biological_process	intrinsic apoptotic signaling pathway by p53 class mediator
M	0072717	biological_process	cellular response to actinomycin D
M	0090200	biological_process	positive regulation of release of cytochrome c from mitochondria
M	0090398	biological_process	cellular senescence
M	0090399	biological_process	replicative senescence
M	0090403	biological_process	oxidative stress-induced premature senescence
M	0097190	biological_process	apoptotic signaling pathway
M	0097193	biological_process	intrinsic apoptotic signaling pathway
M	0097252	biological_process	oligodendrocyte apoptotic process
M	0097371	molecular_function	MDM2/MDM4 family protein binding
M	0097718	molecular_function	disordered domain specific binding
M	0140296	molecular_function	general transcription initiation factor binding
M	0140677	molecular_function	molecular function activator activity
M	0140693	molecular_function	molecular condensate scaffold activity
M	1900119	biological_process	positive regulation of execution phase of apoptosis
M	1902749	biological_process	regulation of cell cycle G2/M phase transition
M	1902895	biological_process	positive regulation of miRNA transcription
M	1903451	biological_process	negative regulation of G1 to G0 transition
M	1905856	biological_process	negative regulation of pentose-phosphate shunt
M	1990841	molecular_function	promoter-specific chromatin binding
M	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
M	2000774	biological_process	positive regulation of cellular senescence
M	2001242	biological_process	regulation of intrinsic apoptotic signaling pathway
M	2001244	biological_process	positive regulation of intrinsic apoptotic signaling pathway
N	0000122	biological_process	negative regulation of transcription by RNA polymerase II
N	0000785	cellular_component	chromatin
N	0000976	molecular_function	transcription cis-regulatory region binding
N	0000978	molecular_function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
N	0000981	molecular_function	DNA-binding transcription factor activity, RNA polymerase II-specific
N	0000987	molecular_function	cis-regulatory region sequence-specific DNA binding
N	0001046	molecular_function	core promoter sequence-specific DNA binding
N	0001094	molecular_function	TFIID-class transcription factor complex binding
N	0001223	molecular_function	transcription coactivator binding
N	0001227	molecular_function	DNA-binding transcription repressor activity, RNA polymerase II-specific
N	0001228	molecular_function	DNA-binding transcription activator activity, RNA polymerase II-specific
N	0002020	molecular_function	protease binding
N	0002039	molecular_function	p53 binding
N	0002244	biological_process	hematopoietic progenitor cell differentiation
N	0003677	molecular_function	DNA binding
N	0003682	molecular_function	chromatin binding
N	0003700	molecular_function	DNA-binding transcription factor activity
N	0003730	molecular_function	mRNA 3'-UTR binding
N	0005507	molecular_function	copper ion binding
N	0005515	molecular_function	protein binding
N	0005634	cellular_component	nucleus
N	0005654	cellular_component	nucleoplasm
N	0005667	cellular_component	transcription regulator complex
N	0005730	cellular_component	nucleolus
N	0005737	cellular_component	cytoplasm
N	0005739	cellular_component	mitochondrion
N	0005759	cellular_component	mitochondrial matrix
N	0005783	cellular_component	endoplasmic reticulum
N	0005813	cellular_component	centrosome
N	0005829	cellular_component	cytosol
N	0006289	biological_process	nucleotide-excision repair
N	0006351	biological_process	DNA-templated transcription
N	0006355	biological_process	regulation of DNA-templated transcription
N	0006357	biological_process	regulation of transcription by RNA polymerase II
N	0006914	biological_process	autophagy
N	0006915	biological_process	apoptotic process
N	0006974	biological_process	DNA damage response
N	0006979	biological_process	response to oxidative stress
N	0006983	biological_process	ER overload response
N	0007265	biological_process	Ras protein signal transduction
N	0007623	biological_process	circadian rhythm
N	0008104	biological_process	intracellular protein localization
N	0008270	molecular_function	zinc ion binding
N	0008285	biological_process	negative regulation of cell population proliferation
N	0008340	biological_process	determination of adult lifespan
N	0009299	biological_process	mRNA transcription
N	0009410	biological_process	response to xenobiotic stimulus
N	0009411	biological_process	response to UV
N	0010212	biological_process	response to ionizing radiation
N	0010332	biological_process	response to gamma radiation
N	0010628	biological_process	positive regulation of gene expression
N	0012501	biological_process	programmed cell death
N	0016032	biological_process	viral process
N	0016363	cellular_component	nuclear matrix
N	0016604	cellular_component	nuclear body
N	0016605	cellular_component	PML body
N	0019899	molecular_function	enzyme binding
N	0030308	biological_process	negative regulation of cell growth
N	0030330	biological_process	DNA damage response, signal transduction by p53 class mediator
N	0030971	molecular_function	receptor tyrosine kinase binding
N	0031571	biological_process	mitotic G1 DNA damage checkpoint signaling
N	0031625	molecular_function	ubiquitin protein ligase binding
N	0032211	biological_process	negative regulation of telomere maintenance via telomerase
N	0032991	cellular_component	protein-containing complex
N	0033209	biological_process	tumor necrosis factor-mediated signaling pathway
N	0034644	biological_process	cellular response to UV
N	0036310	molecular_function	ATP-dependent DNA/DNA annealing activity
N	0042149	biological_process	cellular response to glucose starvation
N	0042771	biological_process	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
N	0042802	molecular_function	identical protein binding
N	0042826	molecular_function	histone deacetylase binding
N	0042981	biological_process	regulation of apoptotic process
N	0043065	biological_process	positive regulation of apoptotic process
N	0043066	biological_process	negative regulation of apoptotic process
N	0043153	biological_process	entrainment of circadian clock by photoperiod
N	0043621	molecular_function	obsolete protein self-association
N	0045815	biological_process	transcription initiation-coupled chromatin remodeling
N	0045892	biological_process	negative regulation of DNA-templated transcription
N	0045893	biological_process	positive regulation of DNA-templated transcription
N	0045899	biological_process	positive regulation of RNA polymerase II transcription preinitiation complex assembly
N	0045944	biological_process	positive regulation of transcription by RNA polymerase II
N	0046677	biological_process	response to antibiotic
N	0046872	molecular_function	metal ion binding
N	0046982	molecular_function	protein heterodimerization activity
N	0048147	biological_process	negative regulation of fibroblast proliferation
N	0048511	biological_process	rhythmic process
N	0048512	biological_process	circadian behavior
N	0048539	biological_process	bone marrow development
N	0051053	biological_process	negative regulation of DNA metabolic process
N	0051087	molecular_function	protein-folding chaperone binding
N	0051097	biological_process	negative regulation of helicase activity
N	0051262	biological_process	protein tetramerization
N	0051721	molecular_function	protein phosphatase 2A binding
N	0051726	biological_process	regulation of cell cycle
N	0060218	biological_process	hematopoietic stem cell differentiation
N	0060333	biological_process	type II interferon-mediated signaling pathway
N	0061629	molecular_function	RNA polymerase II-specific DNA-binding transcription factor binding
N	0062100	biological_process	positive regulation of programmed necrotic cell death
N	0065003	biological_process	protein-containing complex assembly
N	0070059	biological_process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
N	0070245	biological_process	positive regulation of thymocyte apoptotic process
N	0071456	biological_process	cellular response to hypoxia
N	0071466	biological_process	cellular response to xenobiotic stimulus
N	0071479	biological_process	cellular response to ionizing radiation
N	0071480	biological_process	cellular response to gamma radiation
N	0071889	molecular_function	14-3-3 protein binding
N	0072331	biological_process	signal transduction by p53 class mediator
N	0072332	biological_process	intrinsic apoptotic signaling pathway by p53 class mediator
N	0072717	biological_process	cellular response to actinomycin D
N	0090200	biological_process	positive regulation of release of cytochrome c from mitochondria
N	0090398	biological_process	cellular senescence
N	0090399	biological_process	replicative senescence
N	0090403	biological_process	oxidative stress-induced premature senescence
N	0097190	biological_process	apoptotic signaling pathway
N	0097193	biological_process	intrinsic apoptotic signaling pathway
N	0097252	biological_process	oligodendrocyte apoptotic process
N	0097371	molecular_function	MDM2/MDM4 family protein binding
N	0097718	molecular_function	disordered domain specific binding
N	0140296	molecular_function	general transcription initiation factor binding
N	0140677	molecular_function	molecular function activator activity
N	0140693	molecular_function	molecular condensate scaffold activity
N	1900119	biological_process	positive regulation of execution phase of apoptosis
N	1902749	biological_process	regulation of cell cycle G2/M phase transition
N	1902895	biological_process	positive regulation of miRNA transcription
N	1903451	biological_process	negative regulation of G1 to G0 transition
N	1905856	biological_process	negative regulation of pentose-phosphate shunt
N	1990841	molecular_function	promoter-specific chromatin binding
N	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
N	2000774	biological_process	positive regulation of cellular senescence
N	2001242	biological_process	regulation of intrinsic apoptotic signaling pathway
N	2001244	biological_process	positive regulation of intrinsic apoptotic signaling pathway

Functional Information from PROSITE/UniProt

site_id	PS00046
Number of Residues	7
Details	HISTONE_H2A Histone H2A signature. AGLqFPV

Chain	Residue	Details
C	ALA21-VAL27

---

site_id	PS00047
Number of Residues	5
Details	HISTONE_H4 Histone H4 signature. GAKRH

Chain	Residue	Details
B	GLY14-HIS18

---

site_id	PS00322
Number of Residues	7
Details	HISTONE_H3_1 Histone H3 signature 1. KAPRKQL

Chain	Residue	Details
A	LYS14-LEU20

---

site_id	PS00348
Number of Residues	13
Details	P53 p53 family signature. MCNSSCMGGMNRR

Chain	Residue	Details
K	MET237-ARG249

---

site_id	PS00357
Number of Residues	23
Details	HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG

Chain	Residue	Details
D	ARG89-GLY111

---

site_id	PS00959
Number of Residues	9
Details	HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI

Chain	Residue	Details
A	PRO66-ILE74

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19783980","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	16
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29211711","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	7
Details	Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"PubMed","id":"31542297","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27436229","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	1
Details	Modified residue: {"description":"N6-methyllysine","evidences":[{"source":"PubMed","id":"15983376","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	2
Details	Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"PubMed","id":"17267393","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"PubMed","id":"21724829","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	2
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	2
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI18
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"PubMed","id":"30886146","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI19
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"19818714","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI20
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI21
Number of Residues	2
Details	Modified residue: {"description":"N6-(beta-hydroxybutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"27105115","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI22
Number of Residues	2
Details	Modified residue: {"description":"N6-crotonyllysine; alternate","evidences":[{"source":"PubMed","id":"21925322","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI23
Number of Residues	4
Details	Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI24
Number of Residues	2
Details	Modified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"24352239","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI25
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI26
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"15386022","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16359901","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16702407","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25470042","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI27
Number of Residues	3
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI28
Number of Residues	2
Details	Modified residue: {"description":"PolyADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI29
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI30
Number of Residues	4
Details	Modified residue: {"description":"N6-lactoyllysine; alternate","evidences":[{"source":"PubMed","id":"31645732","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI31
Number of Residues	4
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI32
Number of Residues	2
Details	Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI33
Number of Residues	2
Details	Modified residue: {"description":"Dimethylated arginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI34
Number of Residues	4
Details	Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI35
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q00729","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI36
Number of Residues	2
Details	Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI37
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"21726816","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI38
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"16307923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16713563","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI39
Number of Residues	492
Details	Region: {"description":"Required for interaction with FBXO42","evidences":[{"source":"PubMed","id":"19509332","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI40
Number of Residues	28
Details	Region: {"description":"Interaction with the 53BP2 SH3 domain"}

Chain

Residue

Details

---

site_id	SWS_FT_FI41
Number of Residues	28
Details	Region: {"description":"Interaction with DNA"}

Chain

Residue

Details

---

site_id	SWS_FT_FI42
Number of Residues	16
Details	Binding site: {"evidences":[{"source":"PubMed","id":"14534297","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16793544","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17015838","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18650397","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19515728","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20142040","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20364130","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI43
Number of Residues	4
Details	Site: {"description":"Interaction with DNA","evidences":[{"source":"PubMed","id":"16793544","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18996393","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20364130","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI44
Number of Residues	8
Details	Modified residue: {"description":"N6-lactoyllysine","evidences":[{"source":"PubMed","id":"38653238","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI45
Number of Residues	8
Details	Modified residue: {"description":"Phosphoserine; by AURKB","evidences":[{"source":"PubMed","id":"20959462","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI46
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine; by AURKB","evidences":[{"source":"PubMed","id":"20959462","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI47
Number of Residues	8
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"19536131","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---