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7XX6

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000786cellular_componentnucleosome
A0003677molecular_functionDNA binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005694cellular_componentchromosome
A0006325biological_processchromatin organization
A0006334biological_processnucleosome assembly
A0016020cellular_componentmembrane
A0030527molecular_functionstructural constituent of chromatin
A0032200biological_processtelomere organization
A0032991cellular_componentprotein-containing complex
A0040029biological_processepigenetic regulation of gene expression
A0045296molecular_functioncadherin binding
A0046982molecular_functionprotein heterodimerization activity
A0070062cellular_componentextracellular exosome
B0000781cellular_componentchromosome, telomeric region
B0000786cellular_componentnucleosome
B0003677molecular_functionDNA binding
B0003723molecular_functionRNA binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005694cellular_componentchromosome
B0006325biological_processchromatin organization
B0006334biological_processnucleosome assembly
B0016020cellular_componentmembrane
B0030527molecular_functionstructural constituent of chromatin
B0032200biological_processtelomere organization
B0032991cellular_componentprotein-containing complex
B0043505cellular_componentCENP-A containing nucleosome
B0045653biological_processnegative regulation of megakaryocyte differentiation
B0046982molecular_functionprotein heterodimerization activity
B0061644biological_processprotein localization to CENP-A containing chromatin
B0070062cellular_componentextracellular exosome
C0000786cellular_componentnucleosome
C0003677molecular_functionDNA binding
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005694cellular_componentchromosome
C0006325biological_processchromatin organization
C0008285biological_processnegative regulation of cell population proliferation
C0030527molecular_functionstructural constituent of chromatin
C0031507biological_processheterochromatin formation
C0043505cellular_componentCENP-A containing nucleosome
C0046982molecular_functionprotein heterodimerization activity
C0061644biological_processprotein localization to CENP-A containing chromatin
C0070062cellular_componentextracellular exosome
D0000786cellular_componentnucleosome
D0001530molecular_functionlipopolysaccharide binding
D0002227biological_processinnate immune response in mucosa
D0003677molecular_functionDNA binding
D0005515molecular_functionprotein binding
D0005615cellular_componentextracellular space
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005694cellular_componentchromosome
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006325biological_processchromatin organization
D0006334biological_processnucleosome assembly
D0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
D0019731biological_processantibacterial humoral response
D0030527molecular_functionstructural constituent of chromatin
D0031640biological_processkilling of cells of another organism
D0042742biological_processdefense response to bacterium
D0043505cellular_componentCENP-A containing nucleosome
D0046982molecular_functionprotein heterodimerization activity
D0050829biological_processdefense response to Gram-negative bacterium
D0050830biological_processdefense response to Gram-positive bacterium
D0061644biological_processprotein localization to CENP-A containing chromatin
D0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
E0000786cellular_componentnucleosome
E0003677molecular_functionDNA binding
E0005515molecular_functionprotein binding
E0005576cellular_componentextracellular region
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005694cellular_componentchromosome
E0006325biological_processchromatin organization
E0006334biological_processnucleosome assembly
E0016020cellular_componentmembrane
E0030527molecular_functionstructural constituent of chromatin
E0032200biological_processtelomere organization
E0032991cellular_componentprotein-containing complex
E0040029biological_processepigenetic regulation of gene expression
E0045296molecular_functioncadherin binding
E0046982molecular_functionprotein heterodimerization activity
E0070062cellular_componentextracellular exosome
F0000781cellular_componentchromosome, telomeric region
F0000786cellular_componentnucleosome
F0003677molecular_functionDNA binding
F0003723molecular_functionRNA binding
F0005515molecular_functionprotein binding
F0005576cellular_componentextracellular region
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005694cellular_componentchromosome
F0006325biological_processchromatin organization
F0006334biological_processnucleosome assembly
F0016020cellular_componentmembrane
F0030527molecular_functionstructural constituent of chromatin
F0032200biological_processtelomere organization
F0032991cellular_componentprotein-containing complex
F0043505cellular_componentCENP-A containing nucleosome
F0045653biological_processnegative regulation of megakaryocyte differentiation
F0046982molecular_functionprotein heterodimerization activity
F0061644biological_processprotein localization to CENP-A containing chromatin
F0070062cellular_componentextracellular exosome
G0000786cellular_componentnucleosome
G0003677molecular_functionDNA binding
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005694cellular_componentchromosome
G0006325biological_processchromatin organization
G0008285biological_processnegative regulation of cell population proliferation
G0030527molecular_functionstructural constituent of chromatin
G0031507biological_processheterochromatin formation
G0043505cellular_componentCENP-A containing nucleosome
G0046982molecular_functionprotein heterodimerization activity
G0061644biological_processprotein localization to CENP-A containing chromatin
G0070062cellular_componentextracellular exosome
H0000786cellular_componentnucleosome
H0001530molecular_functionlipopolysaccharide binding
H0002227biological_processinnate immune response in mucosa
H0003677molecular_functionDNA binding
H0005515molecular_functionprotein binding
H0005615cellular_componentextracellular space
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005694cellular_componentchromosome
H0005829cellular_componentcytosol
H0005886cellular_componentplasma membrane
H0006325biological_processchromatin organization
H0006334biological_processnucleosome assembly
H0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
H0019731biological_processantibacterial humoral response
H0030527molecular_functionstructural constituent of chromatin
H0031640biological_processkilling of cells of another organism
H0042742biological_processdefense response to bacterium
H0043505cellular_componentCENP-A containing nucleosome
H0046982molecular_functionprotein heterodimerization activity
H0050829biological_processdefense response to Gram-negative bacterium
H0050830biological_processdefense response to Gram-positive bacterium
H0061644biological_processprotein localization to CENP-A containing chromatin
H0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
K0000786cellular_componentnucleosome
K0003677molecular_functionDNA binding
K0005515molecular_functionprotein binding
K0005576cellular_componentextracellular region
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005694cellular_componentchromosome
K0006325biological_processchromatin organization
K0006334biological_processnucleosome assembly
K0016020cellular_componentmembrane
K0030527molecular_functionstructural constituent of chromatin
K0032200biological_processtelomere organization
K0032991cellular_componentprotein-containing complex
K0040029biological_processepigenetic regulation of gene expression
K0045296molecular_functioncadherin binding
K0046982molecular_functionprotein heterodimerization activity
K0070062cellular_componentextracellular exosome
L0000781cellular_componentchromosome, telomeric region
L0000786cellular_componentnucleosome
L0003677molecular_functionDNA binding
L0003723molecular_functionRNA binding
L0005515molecular_functionprotein binding
L0005576cellular_componentextracellular region
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005694cellular_componentchromosome
L0006325biological_processchromatin organization
L0006334biological_processnucleosome assembly
L0016020cellular_componentmembrane
L0030527molecular_functionstructural constituent of chromatin
L0032200biological_processtelomere organization
L0032991cellular_componentprotein-containing complex
L0043505cellular_componentCENP-A containing nucleosome
L0045653biological_processnegative regulation of megakaryocyte differentiation
L0046982molecular_functionprotein heterodimerization activity
L0061644biological_processprotein localization to CENP-A containing chromatin
L0070062cellular_componentextracellular exosome
M0000786cellular_componentnucleosome
M0003677molecular_functionDNA binding
M0005515molecular_functionprotein binding
M0005634cellular_componentnucleus
M0005694cellular_componentchromosome
M0006325biological_processchromatin organization
M0008285biological_processnegative regulation of cell population proliferation
M0030527molecular_functionstructural constituent of chromatin
M0031507biological_processheterochromatin formation
M0043505cellular_componentCENP-A containing nucleosome
M0046982molecular_functionprotein heterodimerization activity
M0061644biological_processprotein localization to CENP-A containing chromatin
M0070062cellular_componentextracellular exosome
N0000786cellular_componentnucleosome
N0001530molecular_functionlipopolysaccharide binding
N0002227biological_processinnate immune response in mucosa
N0003677molecular_functionDNA binding
N0005515molecular_functionprotein binding
N0005615cellular_componentextracellular space
N0005634cellular_componentnucleus
N0005654cellular_componentnucleoplasm
N0005694cellular_componentchromosome
N0005829cellular_componentcytosol
N0005886cellular_componentplasma membrane
N0006325biological_processchromatin organization
N0006334biological_processnucleosome assembly
N0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
N0019731biological_processantibacterial humoral response
N0030527molecular_functionstructural constituent of chromatin
N0031640biological_processkilling of cells of another organism
N0042742biological_processdefense response to bacterium
N0043505cellular_componentCENP-A containing nucleosome
N0046982molecular_functionprotein heterodimerization activity
N0050829biological_processdefense response to Gram-negative bacterium
N0050830biological_processdefense response to Gram-positive bacterium
N0061644biological_processprotein localization to CENP-A containing chromatin
N0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
O0000786cellular_componentnucleosome
O0003677molecular_functionDNA binding
O0005515molecular_functionprotein binding
O0005576cellular_componentextracellular region
O0005634cellular_componentnucleus
O0005654cellular_componentnucleoplasm
O0005694cellular_componentchromosome
O0006325biological_processchromatin organization
O0006334biological_processnucleosome assembly
O0016020cellular_componentmembrane
O0030527molecular_functionstructural constituent of chromatin
O0032200biological_processtelomere organization
O0032991cellular_componentprotein-containing complex
O0040029biological_processepigenetic regulation of gene expression
O0045296molecular_functioncadherin binding
O0046982molecular_functionprotein heterodimerization activity
O0070062cellular_componentextracellular exosome
P0000781cellular_componentchromosome, telomeric region
P0000786cellular_componentnucleosome
P0003677molecular_functionDNA binding
P0003723molecular_functionRNA binding
P0005515molecular_functionprotein binding
P0005576cellular_componentextracellular region
P0005634cellular_componentnucleus
P0005654cellular_componentnucleoplasm
P0005694cellular_componentchromosome
P0006325biological_processchromatin organization
P0006334biological_processnucleosome assembly
P0016020cellular_componentmembrane
P0030527molecular_functionstructural constituent of chromatin
P0032200biological_processtelomere organization
P0032991cellular_componentprotein-containing complex
P0043505cellular_componentCENP-A containing nucleosome
P0045653biological_processnegative regulation of megakaryocyte differentiation
P0046982molecular_functionprotein heterodimerization activity
P0061644biological_processprotein localization to CENP-A containing chromatin
P0070062cellular_componentextracellular exosome
Q0000786cellular_componentnucleosome
Q0003677molecular_functionDNA binding
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005694cellular_componentchromosome
Q0006325biological_processchromatin organization
Q0008285biological_processnegative regulation of cell population proliferation
Q0030527molecular_functionstructural constituent of chromatin
Q0031507biological_processheterochromatin formation
Q0043505cellular_componentCENP-A containing nucleosome
Q0046982molecular_functionprotein heterodimerization activity
Q0061644biological_processprotein localization to CENP-A containing chromatin
Q0070062cellular_componentextracellular exosome
R0000786cellular_componentnucleosome
R0001530molecular_functionlipopolysaccharide binding
R0002227biological_processinnate immune response in mucosa
R0003677molecular_functionDNA binding
R0005515molecular_functionprotein binding
R0005615cellular_componentextracellular space
R0005634cellular_componentnucleus
R0005654cellular_componentnucleoplasm
R0005694cellular_componentchromosome
R0005829cellular_componentcytosol
R0005886cellular_componentplasma membrane
R0006325biological_processchromatin organization
R0006334biological_processnucleosome assembly
R0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
R0019731biological_processantibacterial humoral response
R0030527molecular_functionstructural constituent of chromatin
R0031640biological_processkilling of cells of another organism
R0042742biological_processdefense response to bacterium
R0043505cellular_componentCENP-A containing nucleosome
R0046982molecular_functionprotein heterodimerization activity
R0050829biological_processdefense response to Gram-negative bacterium
R0050830biological_processdefense response to Gram-positive bacterium
R0061644biological_processprotein localization to CENP-A containing chromatin
R0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
U0000786cellular_componentnucleosome
U0003677molecular_functionDNA binding
U0005515molecular_functionprotein binding
U0005576cellular_componentextracellular region
U0005634cellular_componentnucleus
U0005654cellular_componentnucleoplasm
U0005694cellular_componentchromosome
U0006325biological_processchromatin organization
U0006334biological_processnucleosome assembly
U0016020cellular_componentmembrane
U0030527molecular_functionstructural constituent of chromatin
U0032200biological_processtelomere organization
U0032991cellular_componentprotein-containing complex
U0040029biological_processepigenetic regulation of gene expression
U0045296molecular_functioncadherin binding
U0046982molecular_functionprotein heterodimerization activity
U0070062cellular_componentextracellular exosome
V0000781cellular_componentchromosome, telomeric region
V0000786cellular_componentnucleosome
V0003677molecular_functionDNA binding
V0003723molecular_functionRNA binding
V0005515molecular_functionprotein binding
V0005576cellular_componentextracellular region
V0005634cellular_componentnucleus
V0005654cellular_componentnucleoplasm
V0005694cellular_componentchromosome
V0006325biological_processchromatin organization
V0006334biological_processnucleosome assembly
V0016020cellular_componentmembrane
V0030527molecular_functionstructural constituent of chromatin
V0032200biological_processtelomere organization
V0032991cellular_componentprotein-containing complex
V0043505cellular_componentCENP-A containing nucleosome
V0045653biological_processnegative regulation of megakaryocyte differentiation
V0046982molecular_functionprotein heterodimerization activity
V0061644biological_processprotein localization to CENP-A containing chromatin
V0070062cellular_componentextracellular exosome
W0000786cellular_componentnucleosome
W0003677molecular_functionDNA binding
W0005515molecular_functionprotein binding
W0005634cellular_componentnucleus
W0005694cellular_componentchromosome
W0006325biological_processchromatin organization
W0008285biological_processnegative regulation of cell population proliferation
W0030527molecular_functionstructural constituent of chromatin
W0031507biological_processheterochromatin formation
W0043505cellular_componentCENP-A containing nucleosome
W0046982molecular_functionprotein heterodimerization activity
W0061644biological_processprotein localization to CENP-A containing chromatin
W0070062cellular_componentextracellular exosome
X0000786cellular_componentnucleosome
X0001530molecular_functionlipopolysaccharide binding
X0002227biological_processinnate immune response in mucosa
X0003677molecular_functionDNA binding
X0005515molecular_functionprotein binding
X0005615cellular_componentextracellular space
X0005634cellular_componentnucleus
X0005654cellular_componentnucleoplasm
X0005694cellular_componentchromosome
X0005829cellular_componentcytosol
X0005886cellular_componentplasma membrane
X0006325biological_processchromatin organization
X0006334biological_processnucleosome assembly
X0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
X0019731biological_processantibacterial humoral response
X0030527molecular_functionstructural constituent of chromatin
X0031640biological_processkilling of cells of another organism
X0042742biological_processdefense response to bacterium
X0043505cellular_componentCENP-A containing nucleosome
X0046982molecular_functionprotein heterodimerization activity
X0050829biological_processdefense response to Gram-negative bacterium
X0050830biological_processdefense response to Gram-positive bacterium
X0061644biological_processprotein localization to CENP-A containing chromatin
X0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
Y0000786cellular_componentnucleosome
Y0003677molecular_functionDNA binding
Y0005515molecular_functionprotein binding
Y0005576cellular_componentextracellular region
Y0005634cellular_componentnucleus
Y0005654cellular_componentnucleoplasm
Y0005694cellular_componentchromosome
Y0006325biological_processchromatin organization
Y0006334biological_processnucleosome assembly
Y0016020cellular_componentmembrane
Y0030527molecular_functionstructural constituent of chromatin
Y0032200biological_processtelomere organization
Y0032991cellular_componentprotein-containing complex
Y0040029biological_processepigenetic regulation of gene expression
Y0045296molecular_functioncadherin binding
Y0046982molecular_functionprotein heterodimerization activity
Y0070062cellular_componentextracellular exosome
Z0000781cellular_componentchromosome, telomeric region
Z0000786cellular_componentnucleosome
Z0003677molecular_functionDNA binding
Z0003723molecular_functionRNA binding
Z0005515molecular_functionprotein binding
Z0005576cellular_componentextracellular region
Z0005634cellular_componentnucleus
Z0005654cellular_componentnucleoplasm
Z0005694cellular_componentchromosome
Z0006325biological_processchromatin organization
Z0006334biological_processnucleosome assembly
Z0016020cellular_componentmembrane
Z0030527molecular_functionstructural constituent of chromatin
Z0032200biological_processtelomere organization
Z0032991cellular_componentprotein-containing complex
Z0043505cellular_componentCENP-A containing nucleosome
Z0045653biological_processnegative regulation of megakaryocyte differentiation
Z0046982molecular_functionprotein heterodimerization activity
Z0061644biological_processprotein localization to CENP-A containing chromatin
Z0070062cellular_componentextracellular exosome
a0000786cellular_componentnucleosome
a0003677molecular_functionDNA binding
a0005515molecular_functionprotein binding
a0005634cellular_componentnucleus
a0005694cellular_componentchromosome
a0006325biological_processchromatin organization
a0008285biological_processnegative regulation of cell population proliferation
a0030527molecular_functionstructural constituent of chromatin
a0031507biological_processheterochromatin formation
a0043505cellular_componentCENP-A containing nucleosome
a0046982molecular_functionprotein heterodimerization activity
a0061644biological_processprotein localization to CENP-A containing chromatin
a0070062cellular_componentextracellular exosome
b0000786cellular_componentnucleosome
b0001530molecular_functionlipopolysaccharide binding
b0002227biological_processinnate immune response in mucosa
b0003677molecular_functionDNA binding
b0005515molecular_functionprotein binding
b0005615cellular_componentextracellular space
b0005634cellular_componentnucleus
b0005654cellular_componentnucleoplasm
b0005694cellular_componentchromosome
b0005829cellular_componentcytosol
b0005886cellular_componentplasma membrane
b0006325biological_processchromatin organization
b0006334biological_processnucleosome assembly
b0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
b0019731biological_processantibacterial humoral response
b0030527molecular_functionstructural constituent of chromatin
b0031640biological_processkilling of cells of another organism
b0042742biological_processdefense response to bacterium
b0043505cellular_componentCENP-A containing nucleosome
b0046982molecular_functionprotein heterodimerization activity
b0050829biological_processdefense response to Gram-negative bacterium
b0050830biological_processdefense response to Gram-positive bacterium
b0061644biological_processprotein localization to CENP-A containing chromatin
b0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
e0000786cellular_componentnucleosome
e0003677molecular_functionDNA binding
e0005515molecular_functionprotein binding
e0005576cellular_componentextracellular region
e0005634cellular_componentnucleus
e0005654cellular_componentnucleoplasm
e0005694cellular_componentchromosome
e0006325biological_processchromatin organization
e0006334biological_processnucleosome assembly
e0016020cellular_componentmembrane
e0030527molecular_functionstructural constituent of chromatin
e0032200biological_processtelomere organization
e0032991cellular_componentprotein-containing complex
e0040029biological_processepigenetic regulation of gene expression
e0045296molecular_functioncadherin binding
e0046982molecular_functionprotein heterodimerization activity
e0070062cellular_componentextracellular exosome
f0000781cellular_componentchromosome, telomeric region
f0000786cellular_componentnucleosome
f0003677molecular_functionDNA binding
f0003723molecular_functionRNA binding
f0005515molecular_functionprotein binding
f0005576cellular_componentextracellular region
f0005634cellular_componentnucleus
f0005654cellular_componentnucleoplasm
f0005694cellular_componentchromosome
f0006325biological_processchromatin organization
f0006334biological_processnucleosome assembly
f0016020cellular_componentmembrane
f0030527molecular_functionstructural constituent of chromatin
f0032200biological_processtelomere organization
f0032991cellular_componentprotein-containing complex
f0043505cellular_componentCENP-A containing nucleosome
f0045653biological_processnegative regulation of megakaryocyte differentiation
f0046982molecular_functionprotein heterodimerization activity
f0061644biological_processprotein localization to CENP-A containing chromatin
f0070062cellular_componentextracellular exosome
g0000786cellular_componentnucleosome
g0003677molecular_functionDNA binding
g0005515molecular_functionprotein binding
g0005634cellular_componentnucleus
g0005694cellular_componentchromosome
g0006325biological_processchromatin organization
g0008285biological_processnegative regulation of cell population proliferation
g0030527molecular_functionstructural constituent of chromatin
g0031507biological_processheterochromatin formation
g0043505cellular_componentCENP-A containing nucleosome
g0046982molecular_functionprotein heterodimerization activity
g0061644biological_processprotein localization to CENP-A containing chromatin
g0070062cellular_componentextracellular exosome
h0000786cellular_componentnucleosome
h0001530molecular_functionlipopolysaccharide binding
h0002227biological_processinnate immune response in mucosa
h0003677molecular_functionDNA binding
h0005515molecular_functionprotein binding
h0005615cellular_componentextracellular space
h0005634cellular_componentnucleus
h0005654cellular_componentnucleoplasm
h0005694cellular_componentchromosome
h0005829cellular_componentcytosol
h0005886cellular_componentplasma membrane
h0006325biological_processchromatin organization
h0006334biological_processnucleosome assembly
h0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
h0019731biological_processantibacterial humoral response
h0030527molecular_functionstructural constituent of chromatin
h0031640biological_processkilling of cells of another organism
h0042742biological_processdefense response to bacterium
h0043505cellular_componentCENP-A containing nucleosome
h0046982molecular_functionprotein heterodimerization activity
h0050829biological_processdefense response to Gram-negative bacterium
h0050830biological_processdefense response to Gram-positive bacterium
h0061644biological_processprotein localization to CENP-A containing chromatin
h0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
i0000786cellular_componentnucleosome
i0003677molecular_functionDNA binding
i0005515molecular_functionprotein binding
i0005576cellular_componentextracellular region
i0005634cellular_componentnucleus
i0005654cellular_componentnucleoplasm
i0005694cellular_componentchromosome
i0006325biological_processchromatin organization
i0006334biological_processnucleosome assembly
i0016020cellular_componentmembrane
i0030527molecular_functionstructural constituent of chromatin
i0032200biological_processtelomere organization
i0032991cellular_componentprotein-containing complex
i0040029biological_processepigenetic regulation of gene expression
i0045296molecular_functioncadherin binding
i0046982molecular_functionprotein heterodimerization activity
i0070062cellular_componentextracellular exosome
j0000781cellular_componentchromosome, telomeric region
j0000786cellular_componentnucleosome
j0003677molecular_functionDNA binding
j0003723molecular_functionRNA binding
j0005515molecular_functionprotein binding
j0005576cellular_componentextracellular region
j0005634cellular_componentnucleus
j0005654cellular_componentnucleoplasm
j0005694cellular_componentchromosome
j0006325biological_processchromatin organization
j0006334biological_processnucleosome assembly
j0016020cellular_componentmembrane
j0030527molecular_functionstructural constituent of chromatin
j0032200biological_processtelomere organization
j0032991cellular_componentprotein-containing complex
j0043505cellular_componentCENP-A containing nucleosome
j0045653biological_processnegative regulation of megakaryocyte differentiation
j0046982molecular_functionprotein heterodimerization activity
j0061644biological_processprotein localization to CENP-A containing chromatin
j0070062cellular_componentextracellular exosome
k0000786cellular_componentnucleosome
k0003677molecular_functionDNA binding
k0005515molecular_functionprotein binding
k0005634cellular_componentnucleus
k0005694cellular_componentchromosome
k0006325biological_processchromatin organization
k0008285biological_processnegative regulation of cell population proliferation
k0030527molecular_functionstructural constituent of chromatin
k0031507biological_processheterochromatin formation
k0043505cellular_componentCENP-A containing nucleosome
k0046982molecular_functionprotein heterodimerization activity
k0061644biological_processprotein localization to CENP-A containing chromatin
k0070062cellular_componentextracellular exosome
l0000786cellular_componentnucleosome
l0001530molecular_functionlipopolysaccharide binding
l0002227biological_processinnate immune response in mucosa
l0003677molecular_functionDNA binding
l0005515molecular_functionprotein binding
l0005615cellular_componentextracellular space
l0005634cellular_componentnucleus
l0005654cellular_componentnucleoplasm
l0005694cellular_componentchromosome
l0005829cellular_componentcytosol
l0005886cellular_componentplasma membrane
l0006325biological_processchromatin organization
l0006334biological_processnucleosome assembly
l0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
l0019731biological_processantibacterial humoral response
l0030527molecular_functionstructural constituent of chromatin
l0031640biological_processkilling of cells of another organism
l0042742biological_processdefense response to bacterium
l0043505cellular_componentCENP-A containing nucleosome
l0046982molecular_functionprotein heterodimerization activity
l0050829biological_processdefense response to Gram-negative bacterium
l0050830biological_processdefense response to Gram-positive bacterium
l0061644biological_processprotein localization to CENP-A containing chromatin
l0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
o0000785cellular_componentchromatin
o0000786cellular_componentnucleosome
o0000791cellular_componenteuchromatin
o0003677molecular_functionDNA binding
o0003680molecular_functionminor groove of adenine-thymine-rich DNA binding
o0003690molecular_functiondouble-stranded DNA binding
o0003723molecular_functionRNA binding
o0005515molecular_functionprotein binding
o0005634cellular_componentnucleus
o0005654cellular_componentnucleoplasm
o0005694cellular_componentchromosome
o0005794cellular_componentGolgi apparatus
o0006334biological_processnucleosome assembly
o0015629cellular_componentactin cytoskeleton
o0016604cellular_componentnuclear body
o0017053cellular_componenttranscription repressor complex
o0030261biological_processchromosome condensation
o0030527molecular_functionstructural constituent of chromatin
o0031490molecular_functionchromatin DNA binding
o0031491molecular_functionnucleosome binding
o0031492molecular_functionnucleosomal DNA binding
o0031507biological_processheterochromatin formation
o0045910biological_processnegative regulation of DNA recombination
o2000679biological_processpositive regulation of transcription regulatory region DNA binding
p0000785cellular_componentchromatin
p0000786cellular_componentnucleosome
p0000791cellular_componenteuchromatin
p0003677molecular_functionDNA binding
p0003680molecular_functionminor groove of adenine-thymine-rich DNA binding
p0003690molecular_functiondouble-stranded DNA binding
p0003723molecular_functionRNA binding
p0005515molecular_functionprotein binding
p0005634cellular_componentnucleus
p0005654cellular_componentnucleoplasm
p0005694cellular_componentchromosome
p0005794cellular_componentGolgi apparatus
p0006334biological_processnucleosome assembly
p0015629cellular_componentactin cytoskeleton
p0016604cellular_componentnuclear body
p0017053cellular_componenttranscription repressor complex
p0030261biological_processchromosome condensation
p0030527molecular_functionstructural constituent of chromatin
p0031490molecular_functionchromatin DNA binding
p0031491molecular_functionnucleosome binding
p0031492molecular_functionnucleosomal DNA binding
p0031507biological_processheterochromatin formation
p0045910biological_processnegative regulation of DNA recombination
p2000679biological_processpositive regulation of transcription regulatory region DNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue CA C 201
ChainResidue
CGLU64
DVAL48

site_idAC2
Number of Residues1
Detailsbinding site for residue CA G 201
ChainResidue
GGLU41

site_idAC3
Number of Residues1
Detailsbinding site for residue CA I 101
ChainResidue
IDG-2

site_idAC4
Number of Residues2
Detailsbinding site for residue CA I 102
ChainResidue
IDG51
JDG-52

site_idAC5
Number of Residues2
Detailsbinding site for residue CA I 104
ChainResidue
IDG63
IDG64

site_idAC6
Number of Residues1
Detailsbinding site for residue CA I 105
ChainResidue
IDG-34

site_idAC7
Number of Residues2
Detailsbinding site for residue CA I 106
ChainResidue
IDG-52
JDG51

site_idAC8
Number of Residues2
Detailsbinding site for residue CA I 107
ChainResidue
IDG57
IDC58

site_idAC9
Number of Residues1
Detailsbinding site for residue CA I 108
ChainResidue
mDG32

site_idAD1
Number of Residues2
Detailsbinding site for residue K I 109
ChainResidue
IDT-26
IDA-25

site_idAD2
Number of Residues1
Detailsbinding site for residue CA J 101
ChainResidue
JDG29

site_idAD3
Number of Residues1
Detailsbinding site for residue CA J 103
ChainResidue
JDG-34

site_idAD4
Number of Residues3
Detailsbinding site for residue CA O 201
ChainResidue
OGLN76
OASP77
OCA202

site_idAD5
Number of Residues3
Detailsbinding site for residue CA O 202
ChainResidue
OGLU73
OCA201
PASP24

site_idAD6
Number of Residues2
Detailsbinding site for residue CA S 101
ChainResidue
SDG-52
TDG51

site_idAD7
Number of Residues1
Detailsbinding site for residue CA T 101
ChainResidue
TDG-19

site_idAD8
Number of Residues2
Detailsbinding site for residue CA T 102
ChainResidue
SDG-40
TDA39

site_idAD9
Number of Residues2
Detailsbinding site for residue K T 104
ChainResidue
TDT-26
TDA-25

site_idAE1
Number of Residues2
Detailsbinding site for residue K T 105
ChainResidue
TDT35
TDA36

site_idAE2
Number of Residues1
Detailsbinding site for residue CA a 201
ChainResidue
aGLU41

site_idAE3
Number of Residues1
Detailsbinding site for residue CA a 202
ChainResidue
aGLU91

site_idAE4
Number of Residues2
Detailsbinding site for residue CA c 101
ChainResidue
cDG51
dDG-52

site_idAE5
Number of Residues2
Detailsbinding site for residue CA c 102
ChainResidue
cDG-52
dDG51

site_idAE6
Number of Residues1
Detailsbinding site for residue CA c 104
ChainResidue
cDG63

site_idAE7
Number of Residues2
Detailsbinding site for residue CA c 105
ChainResidue
cDG57
cDC58

site_idAE8
Number of Residues1
Detailsbinding site for residue CA c 106
ChainResidue
cDG29

site_idAE9
Number of Residues1
Detailsbinding site for residue CA c 107
ChainResidue
cDG-2

site_idAF1
Number of Residues2
Detailsbinding site for residue K c 108
ChainResidue
cDT-26
cDA-25

site_idAF2
Number of Residues1
Detailsbinding site for residue CA d 103
ChainResidue
dDG29

site_idAF3
Number of Residues2
Detailsbinding site for residue CA d 107
ChainResidue
SDG32
dDC-50

site_idAF4
Number of Residues1
Detailsbinding site for residue CA d 108
ChainResidue
dDC-10

site_idAF5
Number of Residues1
Detailsbinding site for residue CA i 201
ChainResidue
iASP77

site_idAF6
Number of Residues1
Detailsbinding site for residue CA j 201
ChainResidue
jASP24

site_idAF7
Number of Residues1
Detailsbinding site for residue CA m 101
ChainResidue
mDG-53

site_idAF8
Number of Residues2
Detailsbinding site for residue CA m 102
ChainResidue
mDG62
mDG63

site_idAF9
Number of Residues3
Detailsbinding site for residue CA n 101
ChainResidue
mDG-52
nDG51
nDC52

site_idAG1
Number of Residues1
Detailsbinding site for residue CA o 201
ChainResidue
oGLU62

site_idAG2
Number of Residues1
Detailsbinding site for residue CA p 201
ChainResidue
pGLU62

Functional Information from PROSITE/UniProt
site_idPS00046
Number of Residues7
DetailsHISTONE_H2A Histone H2A signature. AGLqFPV
ChainResidueDetails
aALA21-VAL27

site_idPS00047
Number of Residues5
DetailsHISTONE_H4 Histone H4 signature. GAKRH
ChainResidueDetails
BGLY14-HIS18

site_idPS00322
Number of Residues7
DetailsHISTONE_H3_1 Histone H3 signature 1. KAPRKQL
ChainResidueDetails
ALYS14-LEU20

site_idPS00357
Number of Residues23
DetailsHISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
ChainResidueDetails
bARG92-GLY114

site_idPS00959
Number of Residues9
DetailsHISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
ChainResidueDetails
APRO66-ILE74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsModified residue: {"description":"N6-methyllysine","evidences":[{"source":"PubMed","id":"15983376","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19783980","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues66
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues8
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues8
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29211711","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues8
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues8
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues30
DetailsModified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"PubMed","id":"31542297","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues8
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27436229","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"15983376","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16185088","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues8
DetailsModified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"PubMed","id":"17267393","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"PubMed","id":"21724829","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues8
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues8
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI17
Number of Residues8
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI18
Number of Residues8
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI19
Number of Residues8
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"PubMed","id":"30886146","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI20
Number of Residues16
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"19818714","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI21
Number of Residues18
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI22
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"12086618","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15964846","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17967882","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27338793","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI23
Number of Residues2
DetailsModified residue: {"description":"N6-(beta-hydroxybutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"27105115","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI24
Number of Residues8
DetailsModified residue: {"description":"N6-crotonyllysine; alternate","evidences":[{"source":"PubMed","id":"21925322","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI25
Number of Residues16
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI26
Number of Residues8
DetailsModified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"24352239","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI27
Number of Residues6
DetailsModified residue: {"description":"Phosphothreonine; by DCAF1","evidences":[{"source":"PubMed","id":"15078818","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24140421","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI28
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI29
Number of Residues12
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"15386022","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16359901","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16702407","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25470042","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI30
Number of Residues10
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI31
Number of Residues8
DetailsModified residue: {"description":"PolyADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI32
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI33
Number of Residues16
DetailsModified residue: {"description":"N6-lactoyllysine; alternate","evidences":[{"source":"PubMed","id":"31645732","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI34
Number of Residues16
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI35
Number of Residues8
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI36
Number of Residues8
DetailsModified residue: {"description":"Dimethylated arginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI37
Number of Residues16
DetailsModified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI38
Number of Residues8
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q00729","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI39
Number of Residues8
DetailsGlycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI40
Number of Residues8
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"21726816","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI41
Number of Residues16
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"16307923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16713563","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI42
Number of Residues2
DetailsModified residue: {"description":"Citrulline","evidences":[{"source":"UniProtKB","id":"P43275","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

242842

PDB entries from 2025-10-08

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