7X0Y

Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000325	cellular_component	plant-type vacuole
A	0003677	molecular_function	DNA binding
A	0003904	molecular_function	deoxyribodipyrimidine photo-lyase activity
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005634	cellular_component	nucleus
A	0005737	cellular_component	cytoplasm
A	0006325	biological_process	chromatin organization
A	0006338	biological_process	chromatin remodeling
A	0006952	biological_process	defense response
A	0007623	biological_process	circadian rhythm
A	0009414	biological_process	response to water deprivation
A	0009416	biological_process	response to light stimulus
A	0009637	biological_process	response to blue light
A	0009638	biological_process	phototropism
A	0009646	biological_process	response to absence of light
A	0009785	biological_process	blue light signaling pathway
A	0009791	biological_process	post-embryonic development
A	0009881	molecular_function	photoreceptor activity
A	0009882	molecular_function	blue light photoreceptor activity
A	0009909	biological_process	regulation of flower development
A	0009911	biological_process	positive regulation of flower development
A	0010075	biological_process	regulation of meristem growth
A	0010118	biological_process	stomatal movement
A	0010244	biological_process	response to low fluence blue light stimulus by blue low-fluence system
A	0010617	biological_process	circadian regulation of calcium ion oscillation
A	0016301	molecular_function	kinase activity
A	0016604	cellular_component	nuclear body
A	0032922	biological_process	circadian regulation of gene expression
A	0042752	biological_process	regulation of circadian rhythm
A	0042802	molecular_function	identical protein binding
A	0042803	molecular_function	protein homodimerization activity
A	0043153	biological_process	entrainment of circadian clock by photoperiod
A	0046777	biological_process	protein autophosphorylation
A	0046872	molecular_function	metal ion binding
A	0048574	biological_process	long-day photoperiodism, flowering
A	0048580	biological_process	regulation of post-embryonic development
A	0048731	biological_process	system development
A	0051607	biological_process	defense response to virus
A	0071949	molecular_function	FAD binding
A	0072387	biological_process	flavin adenine dinucleotide metabolic process
A	1901371	biological_process	regulation of leaf morphogenesis
A	1902347	biological_process	response to strigolactone
A	2000028	biological_process	regulation of photoperiodism, flowering
A	2000377	biological_process	regulation of reactive oxygen species metabolic process
A	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
B	0000166	molecular_function	nucleotide binding
B	0000325	cellular_component	plant-type vacuole
B	0003677	molecular_function	DNA binding
B	0003904	molecular_function	deoxyribodipyrimidine photo-lyase activity
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005634	cellular_component	nucleus
B	0005737	cellular_component	cytoplasm
B	0006325	biological_process	chromatin organization
B	0006338	biological_process	chromatin remodeling
B	0006952	biological_process	defense response
B	0007623	biological_process	circadian rhythm
B	0009414	biological_process	response to water deprivation
B	0009416	biological_process	response to light stimulus
B	0009637	biological_process	response to blue light
B	0009638	biological_process	phototropism
B	0009646	biological_process	response to absence of light
B	0009785	biological_process	blue light signaling pathway
B	0009791	biological_process	post-embryonic development
B	0009881	molecular_function	photoreceptor activity
B	0009882	molecular_function	blue light photoreceptor activity
B	0009909	biological_process	regulation of flower development
B	0009911	biological_process	positive regulation of flower development
B	0010075	biological_process	regulation of meristem growth
B	0010118	biological_process	stomatal movement
B	0010244	biological_process	response to low fluence blue light stimulus by blue low-fluence system
B	0010617	biological_process	circadian regulation of calcium ion oscillation
B	0016301	molecular_function	kinase activity
B	0016604	cellular_component	nuclear body
B	0032922	biological_process	circadian regulation of gene expression
B	0042752	biological_process	regulation of circadian rhythm
B	0042802	molecular_function	identical protein binding
B	0042803	molecular_function	protein homodimerization activity
B	0043153	biological_process	entrainment of circadian clock by photoperiod
B	0046777	biological_process	protein autophosphorylation
B	0046872	molecular_function	metal ion binding
B	0048574	biological_process	long-day photoperiodism, flowering
B	0048580	biological_process	regulation of post-embryonic development
B	0048731	biological_process	system development
B	0051607	biological_process	defense response to virus
B	0071949	molecular_function	FAD binding
B	0072387	biological_process	flavin adenine dinucleotide metabolic process
B	1901371	biological_process	regulation of leaf morphogenesis
B	1902347	biological_process	response to strigolactone
B	2000028	biological_process	regulation of photoperiodism, flowering
B	2000377	biological_process	regulation of reactive oxygen species metabolic process
B	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
C	0000166	molecular_function	nucleotide binding
C	0000325	cellular_component	plant-type vacuole
C	0003677	molecular_function	DNA binding
C	0003904	molecular_function	deoxyribodipyrimidine photo-lyase activity
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005634	cellular_component	nucleus
C	0005737	cellular_component	cytoplasm
C	0006325	biological_process	chromatin organization
C	0006338	biological_process	chromatin remodeling
C	0006952	biological_process	defense response
C	0007623	biological_process	circadian rhythm
C	0009414	biological_process	response to water deprivation
C	0009416	biological_process	response to light stimulus
C	0009637	biological_process	response to blue light
C	0009638	biological_process	phototropism
C	0009646	biological_process	response to absence of light
C	0009785	biological_process	blue light signaling pathway
C	0009791	biological_process	post-embryonic development
C	0009881	molecular_function	photoreceptor activity
C	0009882	molecular_function	blue light photoreceptor activity
C	0009909	biological_process	regulation of flower development
C	0009911	biological_process	positive regulation of flower development
C	0010075	biological_process	regulation of meristem growth
C	0010118	biological_process	stomatal movement
C	0010244	biological_process	response to low fluence blue light stimulus by blue low-fluence system
C	0010617	biological_process	circadian regulation of calcium ion oscillation
C	0016301	molecular_function	kinase activity
C	0016604	cellular_component	nuclear body
C	0032922	biological_process	circadian regulation of gene expression
C	0042752	biological_process	regulation of circadian rhythm
C	0042802	molecular_function	identical protein binding
C	0042803	molecular_function	protein homodimerization activity
C	0043153	biological_process	entrainment of circadian clock by photoperiod
C	0046777	biological_process	protein autophosphorylation
C	0046872	molecular_function	metal ion binding
C	0048574	biological_process	long-day photoperiodism, flowering
C	0048580	biological_process	regulation of post-embryonic development
C	0048731	biological_process	system development
C	0051607	biological_process	defense response to virus
C	0071949	molecular_function	FAD binding
C	0072387	biological_process	flavin adenine dinucleotide metabolic process
C	1901371	biological_process	regulation of leaf morphogenesis
C	1902347	biological_process	response to strigolactone
C	2000028	biological_process	regulation of photoperiodism, flowering
C	2000377	biological_process	regulation of reactive oxygen species metabolic process
C	2000379	biological_process	positive regulation of reactive oxygen species metabolic process
D	0000166	molecular_function	nucleotide binding
D	0000325	cellular_component	plant-type vacuole
D	0003677	molecular_function	DNA binding
D	0003904	molecular_function	deoxyribodipyrimidine photo-lyase activity
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005634	cellular_component	nucleus
D	0005737	cellular_component	cytoplasm
D	0006325	biological_process	chromatin organization
D	0006338	biological_process	chromatin remodeling
D	0006952	biological_process	defense response
D	0007623	biological_process	circadian rhythm
D	0009414	biological_process	response to water deprivation
D	0009416	biological_process	response to light stimulus
D	0009637	biological_process	response to blue light
D	0009638	biological_process	phototropism
D	0009646	biological_process	response to absence of light
D	0009785	biological_process	blue light signaling pathway
D	0009791	biological_process	post-embryonic development
D	0009881	molecular_function	photoreceptor activity
D	0009882	molecular_function	blue light photoreceptor activity
D	0009909	biological_process	regulation of flower development
D	0009911	biological_process	positive regulation of flower development
D	0010075	biological_process	regulation of meristem growth
D	0010118	biological_process	stomatal movement
D	0010244	biological_process	response to low fluence blue light stimulus by blue low-fluence system
D	0010617	biological_process	circadian regulation of calcium ion oscillation
D	0016301	molecular_function	kinase activity
D	0016604	cellular_component	nuclear body
D	0032922	biological_process	circadian regulation of gene expression
D	0042752	biological_process	regulation of circadian rhythm
D	0042802	molecular_function	identical protein binding
D	0042803	molecular_function	protein homodimerization activity
D	0043153	biological_process	entrainment of circadian clock by photoperiod
D	0046777	biological_process	protein autophosphorylation
D	0046872	molecular_function	metal ion binding
D	0048574	biological_process	long-day photoperiodism, flowering
D	0048580	biological_process	regulation of post-embryonic development
D	0048731	biological_process	system development
D	0051607	biological_process	defense response to virus
D	0071949	molecular_function	FAD binding
D	0072387	biological_process	flavin adenine dinucleotide metabolic process
D	1901371	biological_process	regulation of leaf morphogenesis
D	1902347	biological_process	response to strigolactone
D	2000028	biological_process	regulation of photoperiodism, flowering
D	2000377	biological_process	regulation of reactive oxygen species metabolic process
D	2000379	biological_process	positive regulation of reactive oxygen species metabolic process

Functional Information from PROSITE/UniProt

site_id	PS00394
Number of Residues	13
Details	DNA_PHOTOLYASES_1_1 DNA photolyases class 1 signature 1. TGyPLVDAgMReL

Chain	Residue	Details
C	THR336-LEU348

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	516
Details	Domain: {"description":"Photolyase/cryptochrome alpha/beta","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	32
Details	Binding site: {"evidences":[{"source":"PubMed","id":"32398826","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6K8I","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6K8K","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"Q43125","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"32398826","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6K8K","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	12
Details	Site: {"description":"Involved in electron transfer from the protein surface to the FAD cofactor","evidences":[{"source":"PubMed","id":"25428980","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---