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7WOO

Cryo-EM structure of the inner ring protomer of the Saccharomyces cerevisiae nuclear pore complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000055biological_processribosomal large subunit export from nucleus
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005635cellular_componentnuclear envelope
A0005643cellular_componentnuclear pore
A0006606biological_processprotein import into nucleus
A0006913biological_processnucleocytoplasmic transport
A0006999biological_processnuclear pore organization
A0015031biological_processprotein transport
A0016020cellular_componentmembrane
A0016973biological_processpoly(A)+ mRNA export from nucleus
A0017056molecular_functionstructural constituent of nuclear pore
A0031965cellular_componentnuclear membrane
A0044612cellular_componentnuclear pore linkers
A0044615cellular_componentnuclear pore nuclear basket
A0051028biological_processmRNA transport
C0000972biological_processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
C0000973biological_processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
C0003677molecular_functionDNA binding
C0003723molecular_functionRNA binding
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005635cellular_componentnuclear envelope
C0005643cellular_componentnuclear pore
C0006405biological_processRNA export from nucleus
C0006606biological_processprotein import into nucleus
C0006913biological_processnucleocytoplasmic transport
C0015031biological_processprotein transport
C0016020cellular_componentmembrane
C0017056molecular_functionstructural constituent of nuclear pore
C0031965cellular_componentnuclear membrane
C0036228biological_processprotein localization to nuclear inner membrane
C0044611cellular_componentnuclear pore inner ring
C0051028biological_processmRNA transport
C0051292biological_processnuclear pore complex assembly
D0000972biological_processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
D0003682molecular_functionchromatin binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005635cellular_componentnuclear envelope
D0005643cellular_componentnuclear pore
D0006405biological_processRNA export from nucleus
D0006606biological_processprotein import into nucleus
D0006913biological_processnucleocytoplasmic transport
D0007059biological_processchromosome segregation
D0015031biological_processprotein transport
D0016020cellular_componentmembrane
D0017056molecular_functionstructural constituent of nuclear pore
D0031507biological_processheterochromatin formation
D0031965cellular_componentnuclear membrane
D0034398biological_processtelomere tethering at nuclear periphery
D0036228biological_processprotein localization to nuclear inner membrane
D0044611cellular_componentnuclear pore inner ring
D0044877molecular_functionprotein-containing complex binding
D0051028biological_processmRNA transport
D0051292biological_processnuclear pore complex assembly
D0099115cellular_componentchromosome, subtelomeric region
D1990841molecular_functionpromoter-specific chromatin binding
E0005634cellular_componentnucleus
E0005635cellular_componentnuclear envelope
E0005643cellular_componentnuclear pore
E0006405biological_processRNA export from nucleus
E0006606biological_processprotein import into nucleus
E0006913biological_processnucleocytoplasmic transport
E0006999biological_processnuclear pore organization
E0015031biological_processprotein transport
E0016020cellular_componentmembrane
E0017056molecular_functionstructural constituent of nuclear pore
E0031965cellular_componentnuclear membrane
E0031990biological_processmRNA export from nucleus in response to heat stress
E0044611cellular_componentnuclear pore inner ring
E0051028biological_processmRNA transport
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005635cellular_componentnuclear envelope
F0005643cellular_componentnuclear pore
F0006913biological_processnucleocytoplasmic transport
F0006999biological_processnuclear pore organization
F0015031biological_processprotein transport
F0017056molecular_functionstructural constituent of nuclear pore
F0044611cellular_componentnuclear pore inner ring
F0046822biological_processregulation of nucleocytoplasmic transport
F0051028biological_processmRNA transport
G0000055biological_processribosomal large subunit export from nucleus
G0000973biological_processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
G0003723molecular_functionRNA binding
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005635cellular_componentnuclear envelope
G0005643cellular_componentnuclear pore
G0006405biological_processRNA export from nucleus
G0006409biological_processtRNA export from nucleus
G0006606biological_processprotein import into nucleus
G0006913biological_processnucleocytoplasmic transport
G0008139molecular_functionnuclear localization sequence binding
G0015031biological_processprotein transport
G0016020cellular_componentmembrane
G0016973biological_processpoly(A)+ mRNA export from nucleus
G0017056molecular_functionstructural constituent of nuclear pore
G0031965cellular_componentnuclear membrane
G0034398biological_processtelomere tethering at nuclear periphery
G0042802molecular_functionidentical protein binding
G0044613cellular_componentnuclear pore central transport channel
G0044614cellular_componentnuclear pore cytoplasmic filaments
G0051028biological_processmRNA transport
G0140693molecular_functionmolecular condensate scaffold activity
G1990000biological_processamyloid fibril formation
H0005515molecular_functionprotein binding
H0005634cellular_componentnucleus
H0005635cellular_componentnuclear envelope
H0005643cellular_componentnuclear pore
H0006606biological_processprotein import into nucleus
H0006607biological_processNLS-bearing protein import into nucleus
H0006913biological_processnucleocytoplasmic transport
H0006999biological_processnuclear pore organization
H0015031biological_processprotein transport
H0016020cellular_componentmembrane
H0017056molecular_functionstructural constituent of nuclear pore
H0031965cellular_componentnuclear membrane
H0036228biological_processprotein localization to nuclear inner membrane
H0042802molecular_functionidentical protein binding
H0044613cellular_componentnuclear pore central transport channel
H0051028biological_processmRNA transport
I0000055biological_processribosomal large subunit export from nucleus
I0000056biological_processribosomal small subunit export from nucleus
I0005515molecular_functionprotein binding
I0005543molecular_functionphospholipid binding
I0005634cellular_componentnucleus
I0005635cellular_componentnuclear envelope
I0005643cellular_componentnuclear pore
I0006405biological_processRNA export from nucleus
I0006409biological_processtRNA export from nucleus
I0006606biological_processprotein import into nucleus
I0006607biological_processNLS-bearing protein import into nucleus
I0006913biological_processnucleocytoplasmic transport
I0015031biological_processprotein transport
I0016020cellular_componentmembrane
I0016973biological_processpoly(A)+ mRNA export from nucleus
I0017056molecular_functionstructural constituent of nuclear pore
I0031965cellular_componentnuclear membrane
I0034399cellular_componentnuclear periphery
I0044613cellular_componentnuclear pore central transport channel
I0044615cellular_componentnuclear pore nuclear basket
I0051028biological_processmRNA transport
J0000055biological_processribosomal large subunit export from nucleus
J0000973biological_processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
J0003723molecular_functionRNA binding
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005635cellular_componentnuclear envelope
J0005643cellular_componentnuclear pore
J0006405biological_processRNA export from nucleus
J0006409biological_processtRNA export from nucleus
J0006606biological_processprotein import into nucleus
J0006913biological_processnucleocytoplasmic transport
J0008139molecular_functionnuclear localization sequence binding
J0015031biological_processprotein transport
J0016020cellular_componentmembrane
J0016973biological_processpoly(A)+ mRNA export from nucleus
J0017056molecular_functionstructural constituent of nuclear pore
J0031965cellular_componentnuclear membrane
J0034398biological_processtelomere tethering at nuclear periphery
J0042802molecular_functionidentical protein binding
J0044613cellular_componentnuclear pore central transport channel
J0044614cellular_componentnuclear pore cytoplasmic filaments
J0051028biological_processmRNA transport
J0140693molecular_functionmolecular condensate scaffold activity
J1990000biological_processamyloid fibril formation
K0005515molecular_functionprotein binding
K0005634cellular_componentnucleus
K0005635cellular_componentnuclear envelope
K0005643cellular_componentnuclear pore
K0006606biological_processprotein import into nucleus
K0006607biological_processNLS-bearing protein import into nucleus
K0006913biological_processnucleocytoplasmic transport
K0006999biological_processnuclear pore organization
K0015031biological_processprotein transport
K0016020cellular_componentmembrane
K0017056molecular_functionstructural constituent of nuclear pore
K0031965cellular_componentnuclear membrane
K0036228biological_processprotein localization to nuclear inner membrane
K0042802molecular_functionidentical protein binding
K0044613cellular_componentnuclear pore central transport channel
K0051028biological_processmRNA transport
L0000055biological_processribosomal large subunit export from nucleus
L0000056biological_processribosomal small subunit export from nucleus
L0005515molecular_functionprotein binding
L0005543molecular_functionphospholipid binding
L0005634cellular_componentnucleus
L0005635cellular_componentnuclear envelope
L0005643cellular_componentnuclear pore
L0006405biological_processRNA export from nucleus
L0006409biological_processtRNA export from nucleus
L0006606biological_processprotein import into nucleus
L0006607biological_processNLS-bearing protein import into nucleus
L0006913biological_processnucleocytoplasmic transport
L0015031biological_processprotein transport
L0016020cellular_componentmembrane
L0016973biological_processpoly(A)+ mRNA export from nucleus
L0017056molecular_functionstructural constituent of nuclear pore
L0031965cellular_componentnuclear membrane
L0034399cellular_componentnuclear periphery
L0044613cellular_componentnuclear pore central transport channel
L0044615cellular_componentnuclear pore nuclear basket
L0051028biological_processmRNA transport
Z0000055biological_processribosomal large subunit export from nucleus
Z0005515molecular_functionprotein binding
Z0005634cellular_componentnucleus
Z0005635cellular_componentnuclear envelope
Z0005643cellular_componentnuclear pore
Z0006606biological_processprotein import into nucleus
Z0006913biological_processnucleocytoplasmic transport
Z0006999biological_processnuclear pore organization
Z0015031biological_processprotein transport
Z0016020cellular_componentmembrane
Z0016973biological_processpoly(A)+ mRNA export from nucleus
Z0017056molecular_functionstructural constituent of nuclear pore
Z0031965cellular_componentnuclear membrane
Z0044612cellular_componentnuclear pore linkers
Z0044615cellular_componentnuclear pore nuclear basket
Z0051028biological_processmRNA transport
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
ISER238
ISER361
ISER456
LSER238
LSER361
LSER456

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
ISER631
LSER631

237423

PDB entries from 2025-06-11

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