7VGA
Cryo-EM structure of alphavirus, Getah virus
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004252 | molecular_function | serine-type endopeptidase activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0055036 | cellular_component | virion membrane |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0004252 | molecular_function | serine-type endopeptidase activity |
| C | 0006508 | biological_process | proteolysis |
| D | 0004252 | molecular_function | serine-type endopeptidase activity |
| D | 0019028 | cellular_component | viral capsid |
| D | 0055036 | cellular_component | virion membrane |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| F | 0004252 | molecular_function | serine-type endopeptidase activity |
| F | 0006508 | biological_process | proteolysis |
| G | 0004252 | molecular_function | serine-type endopeptidase activity |
| G | 0019028 | cellular_component | viral capsid |
| G | 0055036 | cellular_component | virion membrane |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| I | 0004252 | molecular_function | serine-type endopeptidase activity |
| I | 0006508 | biological_process | proteolysis |
| J | 0004252 | molecular_function | serine-type endopeptidase activity |
| J | 0019028 | cellular_component | viral capsid |
| J | 0055036 | cellular_component | virion membrane |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| L | 0004252 | molecular_function | serine-type endopeptidase activity |
| L | 0006508 | biological_process | proteolysis |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | ACT_SITE: Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01027 |
| Chain | Residue | Details |
| C | HIS146 | |
| L | HIS146 | |
| L | ASP168 | |
| L | SER220 | |
| C | ASP168 | |
| C | SER220 | |
| F | HIS146 | |
| F | ASP168 | |
| F | SER220 | |
| I | HIS146 | |
| I | ASP168 | |
| I | SER220 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | SITE: Involved in dimerization of the capsid protein => ECO:0000250|UniProtKB:Q86925 |
| Chain | Residue | Details |
| C | TYR194 | |
| C | ASN227 | |
| F | TYR194 | |
| F | ASN227 | |
| I | TYR194 | |
| I | ASN227 | |
| L | TYR194 | |
| L | ASN227 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by autolysis => ECO:0000250|UniProtKB:P03315 |
| Chain | Residue | Details |
| C | TRP268 | |
| F | TRP268 | |
| I | TRP268 | |
| L | TRP268 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by host signal peptidase => ECO:0000250 |
| Chain | Residue | Details |
| B | ALA422 | |
| E | ALA422 | |
| H | ALA422 | |
| K | ALA422 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | LIPID: S-palmitoyl cysteine; by host => ECO:0000250 |
| Chain | Residue | Details |
| B | CYS395 | |
| K | CYS395 | |
| K | CYS415 | |
| K | CYS416 | |
| B | CYS415 | |
| B | CYS416 | |
| E | CYS395 | |
| E | CYS415 | |
| E | CYS416 | |
| H | CYS395 | |
| H | CYS415 | |
| H | CYS416 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 8 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255 |
| Chain | Residue | Details |
| B | ASN200 | |
| B | ASN262 | |
| E | ASN200 | |
| E | ASN262 | |
| H | ASN200 | |
| H | ASN262 | |
| K | ASN200 | |
| K | ASN262 |
