7V96

Telomeric Dinucleosome

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000786	cellular_component	nucleosome
A	0003677	molecular_function	DNA binding
A	0005515	molecular_function	protein binding
A	0005576	cellular_component	extracellular region
A	0005634	cellular_component	nucleus
A	0005654	cellular_component	nucleoplasm
A	0005694	cellular_component	chromosome
A	0006325	biological_process	chromatin organization
A	0006334	biological_process	nucleosome assembly
A	0010467	biological_process	gene expression
A	0016020	cellular_component	membrane
A	0030527	molecular_function	structural constituent of chromatin
A	0032200	biological_process	telomere organization
A	0032991	cellular_component	protein-containing complex
A	0040029	biological_process	epigenetic regulation of gene expression
A	0043229	cellular_component	intracellular organelle
A	0045296	molecular_function	cadherin binding
A	0046982	molecular_function	protein heterodimerization activity
A	0070062	cellular_component	extracellular exosome
B	0000781	cellular_component	chromosome, telomeric region
B	0000786	cellular_component	nucleosome
B	0003677	molecular_function	DNA binding
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005576	cellular_component	extracellular region
B	0005634	cellular_component	nucleus
B	0005654	cellular_component	nucleoplasm
B	0005694	cellular_component	chromosome
B	0006325	biological_process	chromatin organization
B	0006334	biological_process	nucleosome assembly
B	0016020	cellular_component	membrane
B	0030527	molecular_function	structural constituent of chromatin
B	0032200	biological_process	telomere organization
B	0032991	cellular_component	protein-containing complex
B	0043505	cellular_component	CENP-A containing nucleosome
B	0045653	biological_process	negative regulation of megakaryocyte differentiation
B	0046982	molecular_function	protein heterodimerization activity
B	0061644	biological_process	protein localization to CENP-A containing chromatin
B	0070062	cellular_component	extracellular exosome
C	0000786	cellular_component	nucleosome
C	0003677	molecular_function	DNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005694	cellular_component	chromosome
C	0006325	biological_process	chromatin organization
C	0008285	biological_process	negative regulation of cell population proliferation
C	0030527	molecular_function	structural constituent of chromatin
C	0031492	molecular_function	nucleosomal DNA binding
C	0031507	biological_process	heterochromatin formation
C	0043229	cellular_component	intracellular organelle
C	0043505	cellular_component	CENP-A containing nucleosome
C	0046982	molecular_function	protein heterodimerization activity
C	0061644	biological_process	protein localization to CENP-A containing chromatin
C	0070062	cellular_component	extracellular exosome
D	0000786	cellular_component	nucleosome
D	0003677	molecular_function	DNA binding
D	0030527	molecular_function	structural constituent of chromatin
D	0046982	molecular_function	protein heterodimerization activity
E	0000786	cellular_component	nucleosome
E	0003677	molecular_function	DNA binding
E	0005515	molecular_function	protein binding
E	0005576	cellular_component	extracellular region
E	0005634	cellular_component	nucleus
E	0005654	cellular_component	nucleoplasm
E	0005694	cellular_component	chromosome
E	0006325	biological_process	chromatin organization
E	0006334	biological_process	nucleosome assembly
E	0010467	biological_process	gene expression
E	0016020	cellular_component	membrane
E	0030527	molecular_function	structural constituent of chromatin
E	0032200	biological_process	telomere organization
E	0032991	cellular_component	protein-containing complex
E	0040029	biological_process	epigenetic regulation of gene expression
E	0043229	cellular_component	intracellular organelle
E	0045296	molecular_function	cadherin binding
E	0046982	molecular_function	protein heterodimerization activity
E	0070062	cellular_component	extracellular exosome
F	0000781	cellular_component	chromosome, telomeric region
F	0000786	cellular_component	nucleosome
F	0003677	molecular_function	DNA binding
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0005576	cellular_component	extracellular region
F	0005634	cellular_component	nucleus
F	0005654	cellular_component	nucleoplasm
F	0005694	cellular_component	chromosome
F	0006325	biological_process	chromatin organization
F	0006334	biological_process	nucleosome assembly
F	0016020	cellular_component	membrane
F	0030527	molecular_function	structural constituent of chromatin
F	0032200	biological_process	telomere organization
F	0032991	cellular_component	protein-containing complex
F	0043505	cellular_component	CENP-A containing nucleosome
F	0045653	biological_process	negative regulation of megakaryocyte differentiation
F	0046982	molecular_function	protein heterodimerization activity
F	0061644	biological_process	protein localization to CENP-A containing chromatin
F	0070062	cellular_component	extracellular exosome
G	0000786	cellular_component	nucleosome
G	0003677	molecular_function	DNA binding
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005694	cellular_component	chromosome
G	0006325	biological_process	chromatin organization
G	0008285	biological_process	negative regulation of cell population proliferation
G	0030527	molecular_function	structural constituent of chromatin
G	0031492	molecular_function	nucleosomal DNA binding
G	0031507	biological_process	heterochromatin formation
G	0043229	cellular_component	intracellular organelle
G	0043505	cellular_component	CENP-A containing nucleosome
G	0046982	molecular_function	protein heterodimerization activity
G	0061644	biological_process	protein localization to CENP-A containing chromatin
G	0070062	cellular_component	extracellular exosome
H	0000786	cellular_component	nucleosome
H	0003677	molecular_function	DNA binding
H	0030527	molecular_function	structural constituent of chromatin
H	0046982	molecular_function	protein heterodimerization activity
K	0000786	cellular_component	nucleosome
K	0003677	molecular_function	DNA binding
K	0005515	molecular_function	protein binding
K	0005576	cellular_component	extracellular region
K	0005634	cellular_component	nucleus
K	0005654	cellular_component	nucleoplasm
K	0005694	cellular_component	chromosome
K	0006325	biological_process	chromatin organization
K	0006334	biological_process	nucleosome assembly
K	0010467	biological_process	gene expression
K	0016020	cellular_component	membrane
K	0030527	molecular_function	structural constituent of chromatin
K	0032200	biological_process	telomere organization
K	0032991	cellular_component	protein-containing complex
K	0040029	biological_process	epigenetic regulation of gene expression
K	0043229	cellular_component	intracellular organelle
K	0045296	molecular_function	cadherin binding
K	0046982	molecular_function	protein heterodimerization activity
K	0070062	cellular_component	extracellular exosome
L	0000781	cellular_component	chromosome, telomeric region
L	0000786	cellular_component	nucleosome
L	0003677	molecular_function	DNA binding
L	0003723	molecular_function	RNA binding
L	0005515	molecular_function	protein binding
L	0005576	cellular_component	extracellular region
L	0005634	cellular_component	nucleus
L	0005654	cellular_component	nucleoplasm
L	0005694	cellular_component	chromosome
L	0006325	biological_process	chromatin organization
L	0006334	biological_process	nucleosome assembly
L	0016020	cellular_component	membrane
L	0030527	molecular_function	structural constituent of chromatin
L	0032200	biological_process	telomere organization
L	0032991	cellular_component	protein-containing complex
L	0043505	cellular_component	CENP-A containing nucleosome
L	0045653	biological_process	negative regulation of megakaryocyte differentiation
L	0046982	molecular_function	protein heterodimerization activity
L	0061644	biological_process	protein localization to CENP-A containing chromatin
L	0070062	cellular_component	extracellular exosome
M	0000786	cellular_component	nucleosome
M	0003677	molecular_function	DNA binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005694	cellular_component	chromosome
M	0006325	biological_process	chromatin organization
M	0008285	biological_process	negative regulation of cell population proliferation
M	0030527	molecular_function	structural constituent of chromatin
M	0031492	molecular_function	nucleosomal DNA binding
M	0031507	biological_process	heterochromatin formation
M	0043229	cellular_component	intracellular organelle
M	0043505	cellular_component	CENP-A containing nucleosome
M	0046982	molecular_function	protein heterodimerization activity
M	0061644	biological_process	protein localization to CENP-A containing chromatin
M	0070062	cellular_component	extracellular exosome
N	0000786	cellular_component	nucleosome
N	0003677	molecular_function	DNA binding
N	0030527	molecular_function	structural constituent of chromatin
N	0046982	molecular_function	protein heterodimerization activity
O	0000786	cellular_component	nucleosome
O	0003677	molecular_function	DNA binding
O	0005515	molecular_function	protein binding
O	0005576	cellular_component	extracellular region
O	0005634	cellular_component	nucleus
O	0005654	cellular_component	nucleoplasm
O	0005694	cellular_component	chromosome
O	0006325	biological_process	chromatin organization
O	0006334	biological_process	nucleosome assembly
O	0010467	biological_process	gene expression
O	0016020	cellular_component	membrane
O	0030527	molecular_function	structural constituent of chromatin
O	0032200	biological_process	telomere organization
O	0032991	cellular_component	protein-containing complex
O	0040029	biological_process	epigenetic regulation of gene expression
O	0043229	cellular_component	intracellular organelle
O	0045296	molecular_function	cadherin binding
O	0046982	molecular_function	protein heterodimerization activity
O	0070062	cellular_component	extracellular exosome
P	0000781	cellular_component	chromosome, telomeric region
P	0000786	cellular_component	nucleosome
P	0003677	molecular_function	DNA binding
P	0003723	molecular_function	RNA binding
P	0005515	molecular_function	protein binding
P	0005576	cellular_component	extracellular region
P	0005634	cellular_component	nucleus
P	0005654	cellular_component	nucleoplasm
P	0005694	cellular_component	chromosome
P	0006325	biological_process	chromatin organization
P	0006334	biological_process	nucleosome assembly
P	0016020	cellular_component	membrane
P	0030527	molecular_function	structural constituent of chromatin
P	0032200	biological_process	telomere organization
P	0032991	cellular_component	protein-containing complex
P	0043505	cellular_component	CENP-A containing nucleosome
P	0045653	biological_process	negative regulation of megakaryocyte differentiation
P	0046982	molecular_function	protein heterodimerization activity
P	0061644	biological_process	protein localization to CENP-A containing chromatin
P	0070062	cellular_component	extracellular exosome
Q	0000786	cellular_component	nucleosome
Q	0003677	molecular_function	DNA binding
Q	0005515	molecular_function	protein binding
Q	0005634	cellular_component	nucleus
Q	0005694	cellular_component	chromosome
Q	0006325	biological_process	chromatin organization
Q	0008285	biological_process	negative regulation of cell population proliferation
Q	0030527	molecular_function	structural constituent of chromatin
Q	0031492	molecular_function	nucleosomal DNA binding
Q	0031507	biological_process	heterochromatin formation
Q	0043229	cellular_component	intracellular organelle
Q	0043505	cellular_component	CENP-A containing nucleosome
Q	0046982	molecular_function	protein heterodimerization activity
Q	0061644	biological_process	protein localization to CENP-A containing chromatin
Q	0070062	cellular_component	extracellular exosome
R	0000786	cellular_component	nucleosome
R	0003677	molecular_function	DNA binding
R	0030527	molecular_function	structural constituent of chromatin
R	0046982	molecular_function	protein heterodimerization activity

Functional Information from PROSITE/UniProt

site_id	PS00046
Number of Residues	7
Details	HISTONE_H2A Histone H2A signature. AGLqFPV

Chain	Residue	Details
C	ALA21-VAL27

---

site_id	PS00047
Number of Residues	5
Details	HISTONE_H4 Histone H4 signature. GAKRH

Chain	Residue	Details
B	GLY14-HIS18

---

site_id	PS00322
Number of Residues	7
Details	HISTONE_H3_1 Histone H3 signature 1. KAPRKQL

Chain	Residue	Details
A	LYS14-LEU20

---

site_id	PS00357
Number of Residues	23
Details	HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG

Chain	Residue	Details
D	ARG89-GLY111

---

site_id	PS00959
Number of Residues	9
Details	HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI

Chain	Residue	Details
A	PRO66-ILE74

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	12
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435

Chain	Residue	Details
D	LYS31
R	LYS31
R	LYS113
R	LYS117
D	LYS113
D	LYS117
H	LYS31
H	LYS113
H	LYS117
N	LYS31
N	LYS113
N	LYS117

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	MOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000250|UniProtKB:Q64475

Chain	Residue	Details
D	GLU32
H	GLU32
N	GLU32
R	GLU32

---

site_id	SWS_FT_FI3
Number of Residues	4
Details	MOD_RES: Phosphoserine; by AMPK => ECO:0000250|UniProtKB:Q8CGP1

Chain	Residue	Details
D	SER33
H	SER33
N	SER33
R	SER33

---

site_id	SWS_FT_FI4
Number of Residues	8
Details	MOD_RES: N6-lactoyllysine; alternate => ECO:0000269|PubMed:31645732

Chain	Residue	Details
D	LYS40
D	LYS82
H	LYS40
H	LYS82
N	LYS40
N	LYS82
R	LYS40
R	LYS82

---

site_id	SWS_FT_FI5
Number of Residues	8
Details	MOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:16627869

Chain	Residue	Details
D	LYS43
P	LYS8
P	LYS16
P	LYS44
D	LYS105
H	LYS43
H	LYS105
N	LYS43
N	LYS105
R	LYS43
R	LYS105
L	LYS44

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	MOD_RES: N6-(2-hydroxyisobutyryl)lysine; alternate => ECO:0000269|PubMed:24681537

Chain	Residue	Details
D	LYS54
L	LYS31
L	LYS77
L	LYS91
P	LYS12
P	LYS31
P	LYS77
P	LYS91
H	LYS54
N	LYS54
R	LYS54
F	LYS12
F	LYS31
F	LYS77
F	LYS91
L	LYS12

---

site_id	SWS_FT_FI7
Number of Residues	4
Details	MOD_RES: Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08

Chain	Residue	Details
D	ARG76
H	ARG76
N	ARG76
R	ARG76
M	LYS74
M	LYS75
Q	LYS74
Q	LYS75

---

site_id	SWS_FT_FI8
Number of Residues	8
Details	MOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08

Chain	Residue	Details
D	ARG83
D	ARG89
H	ARG83
H	ARG89
N	ARG83
N	ARG89
R	ARG83
R	ARG89

---

site_id	SWS_FT_FI9
Number of Residues	4
Details	MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q00729

Chain	Residue	Details
D	THR112
Q	LYS118
Q	LYS119
Q	LYS125
H	THR112
N	THR112
R	THR112
G	LYS119
G	LYS125
M	LYS118
M	LYS119
M	LYS125

---

site_id	SWS_FT_FI10
Number of Residues	4
Details	CARBOHYD: O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807

Chain	Residue	Details
D	SER109
H	SER109
N	SER109
R	SER109
K	LYS14
K	LYS56
O	LYS14
O	LYS56

---

site_id	SWS_FT_FI11
Number of Residues	4
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:21726816

Chain	Residue	Details
D	LYS31
H	LYS31
N	LYS31
R	LYS31

---

site_id	SWS_FT_FI12
Number of Residues	8
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:16307923, ECO:0000269|PubMed:16627869, ECO:0000269|PubMed:16713563

Chain	Residue	Details
B	THR80
D	LYS117
L	THR80
H	LYS117
K	LYS18
N	LYS117
O	LYS18
R	LYS117

---

site_id	SWS_FT_FI13
Number of Residues	4
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:22713238, ECO:0000269|PubMed:22980979

Chain	Residue	Details
C	LYS15
G	LYS15
M	LYS15
Q	LYS15

---

site_id	SWS_FT_FI14
Number of Residues	4
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447

Chain	Residue	Details
B	LYS12
F	LYS12
L	LYS12
P	LYS12

---

site_id	SWS_FT_FI15
Number of Residues	8
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:19818714

Chain	Residue	Details
A	LYS27
B	LYS91
K	LYS27
F	LYS91
L	LYS91
P	LYS91

---

site_id	SWS_FT_FI16
Number of Residues	12
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733

Chain	Residue	Details
B	LYS20
P	LYS20
P	LYS59
P	LYS79
B	LYS59
B	LYS79
F	LYS20
F	LYS59
F	LYS79
L	LYS20
L	LYS59
L	LYS79

---

site_id	SWS_FT_FI17
Number of Residues	4
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000269|PubMed:30886146

Chain	Residue	Details
B	LYS31
F	LYS31
L	LYS31
P	LYS31

---

site_id	SWS_FT_FI18
Number of Residues	4
Details	MOD_RES: N6-methyllysine => ECO:0000269|PubMed:15983376

Chain	Residue	Details
A	LYS37
E	LYS37
K	LYS37
O	LYS37

---

site_id	SWS_FT_FI19
Number of Residues	4
Details	MOD_RES: Phosphotyrosine => ECO:0000269|PubMed:19783980

Chain	Residue	Details
A	TYR41
E	TYR41
K	TYR41
O	TYR41

---

site_id	SWS_FT_FI20
Number of Residues	4
Details	MOD_RES: Phosphoserine => ECO:0000269|PubMed:20850016

Chain	Residue	Details
A	SER57
E	SER57
K	SER57
O	SER57

---

site_id	SWS_FT_FI21
Number of Residues	4
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:29211711

Chain	Residue	Details
A	LYS79
E	LYS79
K	LYS79
O	LYS79

---

site_id	SWS_FT_FI22
Number of Residues	4
Details	MOD_RES: Phosphothreonine => ECO:0000269|PubMed:20850016

Chain	Residue	Details
A	THR80
E	THR80
K	THR80
O	THR80

---

site_id	SWS_FT_FI23
Number of Residues	4
Details	MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P84243

Chain	Residue	Details
A	SER86
E	SER86
K	SER86
O	SER86

---

site_id	SWS_FT_FI24
Number of Residues	4
Details	MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3

Chain	Residue	Details
A	THR107
E	THR107
K	THR107
O	THR107

---

site_id	SWS_FT_FI25
Number of Residues	4
Details	MOD_RES: N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297

Chain	Residue	Details
A	LYS115
E	LYS115
K	LYS115
O	LYS115

---

site_id	SWS_FT_FI26
Number of Residues	4
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:27436229

Chain	Residue	Details
A	LYS122
E	LYS122
K	LYS122
O	LYS122

---

site_id	SWS_FT_FI27
Number of Residues	4
Details	LIPID: N6-decanoyllysine => ECO:0000269|PubMed:35939806

Chain	Residue	Details
A	LYS18
E	LYS18
K	LYS18
O	LYS18

---