7UWS

Atomic model of the partial VSV nucleocapsid

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0019013	cellular_component	viral nucleocapsid
A	0019028	cellular_component	viral capsid
A	0019029	cellular_component	helical viral capsid
A	0019083	biological_process	viral transcription
A	0030430	cellular_component	host cell cytoplasm
A	0039703	biological_process	RNA replication
A	0044423	cellular_component	virion component
A	1990904	cellular_component	ribonucleoprotein complex
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0019013	cellular_component	viral nucleocapsid
B	0019028	cellular_component	viral capsid
B	0019029	cellular_component	helical viral capsid
B	0019083	biological_process	viral transcription
B	0030430	cellular_component	host cell cytoplasm
B	0039703	biological_process	RNA replication
B	0044423	cellular_component	virion component
B	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0005515	molecular_function	protein binding
C	0019013	cellular_component	viral nucleocapsid
C	0019028	cellular_component	viral capsid
C	0019029	cellular_component	helical viral capsid
C	0019083	biological_process	viral transcription
C	0030430	cellular_component	host cell cytoplasm
C	0039703	biological_process	RNA replication
C	0044423	cellular_component	virion component
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0005515	molecular_function	protein binding
D	0019013	cellular_component	viral nucleocapsid
D	0019028	cellular_component	viral capsid
D	0019029	cellular_component	helical viral capsid
D	0019083	biological_process	viral transcription
D	0030430	cellular_component	host cell cytoplasm
D	0039703	biological_process	RNA replication
D	0044423	cellular_component	virion component
D	1990904	cellular_component	ribonucleoprotein complex
E	0003723	molecular_function	RNA binding
E	0005515	molecular_function	protein binding
E	0019013	cellular_component	viral nucleocapsid
E	0019028	cellular_component	viral capsid
E	0019029	cellular_component	helical viral capsid
E	0019083	biological_process	viral transcription
E	0030430	cellular_component	host cell cytoplasm
E	0039703	biological_process	RNA replication
E	0044423	cellular_component	virion component
E	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0019013	cellular_component	viral nucleocapsid
F	0019028	cellular_component	viral capsid
F	0019029	cellular_component	helical viral capsid
F	0019083	biological_process	viral transcription
F	0030430	cellular_component	host cell cytoplasm
F	0039703	biological_process	RNA replication
F	0044423	cellular_component	virion component
F	1990904	cellular_component	ribonucleoprotein complex
G	0003723	molecular_function	RNA binding
G	0005515	molecular_function	protein binding
G	0019013	cellular_component	viral nucleocapsid
G	0019028	cellular_component	viral capsid
G	0019029	cellular_component	helical viral capsid
G	0019083	biological_process	viral transcription
G	0030430	cellular_component	host cell cytoplasm
G	0039703	biological_process	RNA replication
G	0044423	cellular_component	virion component
G	1990904	cellular_component	ribonucleoprotein complex
J	0005198	molecular_function	structural molecule activity
J	0019031	cellular_component	viral envelope
J	0030430	cellular_component	host cell cytoplasm
J	0039660	molecular_function	structural constituent of virion
J	0039702	biological_process	viral budding via host ESCRT complex
J	0044200	cellular_component	host cell nuclear membrane
J	0044423	cellular_component	virion component
J	0046755	biological_process	viral budding
K	0005198	molecular_function	structural molecule activity
K	0019031	cellular_component	viral envelope
K	0030430	cellular_component	host cell cytoplasm
K	0039660	molecular_function	structural constituent of virion
K	0039702	biological_process	viral budding via host ESCRT complex
K	0044200	cellular_component	host cell nuclear membrane
K	0044423	cellular_component	virion component
K	0046755	biological_process	viral budding
L	0005198	molecular_function	structural molecule activity
L	0019031	cellular_component	viral envelope
L	0030430	cellular_component	host cell cytoplasm
L	0039660	molecular_function	structural constituent of virion
L	0039702	biological_process	viral budding via host ESCRT complex
L	0044200	cellular_component	host cell nuclear membrane
L	0044423	cellular_component	virion component
L	0046755	biological_process	viral budding
M	0005198	molecular_function	structural molecule activity
M	0019031	cellular_component	viral envelope
M	0030430	cellular_component	host cell cytoplasm
M	0039660	molecular_function	structural constituent of virion
M	0039702	biological_process	viral budding via host ESCRT complex
M	0044200	cellular_component	host cell nuclear membrane
M	0044423	cellular_component	virion component
M	0046755	biological_process	viral budding
N	0005198	molecular_function	structural molecule activity
N	0019031	cellular_component	viral envelope
N	0030430	cellular_component	host cell cytoplasm
N	0039660	molecular_function	structural constituent of virion
N	0039702	biological_process	viral budding via host ESCRT complex
N	0044200	cellular_component	host cell nuclear membrane
N	0044423	cellular_component	virion component
N	0046755	biological_process	viral budding
O	0005198	molecular_function	structural molecule activity
O	0019031	cellular_component	viral envelope
O	0030430	cellular_component	host cell cytoplasm
O	0039660	molecular_function	structural constituent of virion
O	0039702	biological_process	viral budding via host ESCRT complex
O	0044200	cellular_component	host cell nuclear membrane
O	0044423	cellular_component	virion component
O	0046755	biological_process	viral budding
P	0005198	molecular_function	structural molecule activity
P	0019031	cellular_component	viral envelope
P	0030430	cellular_component	host cell cytoplasm
P	0039660	molecular_function	structural constituent of virion
P	0039702	biological_process	viral budding via host ESCRT complex
P	0044200	cellular_component	host cell nuclear membrane
P	0044423	cellular_component	virion component
P	0046755	biological_process	viral budding
Q	0005198	molecular_function	structural molecule activity
Q	0019031	cellular_component	viral envelope
Q	0030430	cellular_component	host cell cytoplasm
Q	0039660	molecular_function	structural constituent of virion
Q	0039702	biological_process	viral budding via host ESCRT complex
Q	0044200	cellular_component	host cell nuclear membrane
Q	0044423	cellular_component	virion component
Q	0046755	biological_process	viral budding
R	0005198	molecular_function	structural molecule activity
R	0019031	cellular_component	viral envelope
R	0030430	cellular_component	host cell cytoplasm
R	0039660	molecular_function	structural constituent of virion
R	0039702	biological_process	viral budding via host ESCRT complex
R	0044200	cellular_component	host cell nuclear membrane
R	0044423	cellular_component	virion component
R	0046755	biological_process	viral budding
S	0005198	molecular_function	structural molecule activity
S	0019031	cellular_component	viral envelope
S	0030430	cellular_component	host cell cytoplasm
S	0039660	molecular_function	structural constituent of virion
S	0039702	biological_process	viral budding via host ESCRT complex
S	0044200	cellular_component	host cell nuclear membrane
S	0044423	cellular_component	virion component
S	0046755	biological_process	viral budding
T	0005198	molecular_function	structural molecule activity
T	0019031	cellular_component	viral envelope
T	0030430	cellular_component	host cell cytoplasm
T	0039660	molecular_function	structural constituent of virion
T	0039702	biological_process	viral budding via host ESCRT complex
T	0044200	cellular_component	host cell nuclear membrane
T	0044423	cellular_component	virion component
T	0046755	biological_process	viral budding
U	0005198	molecular_function	structural molecule activity
U	0019031	cellular_component	viral envelope
U	0030430	cellular_component	host cell cytoplasm
U	0039660	molecular_function	structural constituent of virion
U	0039702	biological_process	viral budding via host ESCRT complex
U	0044200	cellular_component	host cell nuclear membrane
U	0044423	cellular_component	virion component
U	0046755	biological_process	viral budding

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	49
Details	Binding site: {"evidences":[{"source":"PubMed","id":"35970826","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	80
Details	Region: {"description":"Interaction with the phosphoprotein","evidences":[{"source":"PubMed","id":"28396572","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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