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7TCV

VDAC K12E mutant

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
XXX0001662biological_processbehavioral fear response
XXX0005244molecular_functionvoltage-gated monoatomic ion channel activity
XXX0005515molecular_functionprotein binding
XXX0005524molecular_functionATP binding
XXX0005739cellular_componentmitochondrion
XXX0005741cellular_componentmitochondrial outer membrane
XXX0005743cellular_componentmitochondrial inner membrane
XXX0005757cellular_componentmitochondrial permeability transition pore complex
XXX0005886cellular_componentplasma membrane
XXX0006086biological_processacetyl-CoA biosynthetic process from pyruvate
XXX0006811biological_processmonoatomic ion transport
XXX0006820biological_processmonoatomic anion transport
XXX0006869biological_processlipid transport
XXX0006915biological_processapoptotic process
XXX0007268biological_processchemical synaptic transmission
XXX0007270biological_processneuron-neuron synaptic transmission
XXX0007612biological_processlearning
XXX0008142molecular_functionoxysterol binding
XXX0008289molecular_functionlipid binding
XXX0008308molecular_functionvoltage-gated monoatomic anion channel activity
XXX0015288molecular_functionporin activity
XXX0015485molecular_functioncholesterol binding
XXX0016020cellular_componentmembrane
XXX0019901molecular_functionprotein kinase binding
XXX0030855biological_processepithelial cell differentiation
XXX0031210molecular_functionphosphatidylcholine binding
XXX0031966cellular_componentmitochondrial membrane
XXX0036444biological_processcalcium import into the mitochondrion
XXX0042645cellular_componentmitochondrial nucleoid
XXX0042802molecular_functionidentical protein binding
XXX0043065biological_processpositive regulation of apoptotic process
XXX0043066biological_processnegative regulation of apoptotic process
XXX0043209cellular_componentmyelin sheath
XXX0043231cellular_componentintracellular membrane-bounded organelle
XXX0044325molecular_functiontransmembrane transporter binding
XXX0045121cellular_componentmembrane raft
XXX0045202cellular_componentsynapse
XXX0046930cellular_componentpore complex
XXX0055085biological_processtransmembrane transport
XXX0097001molecular_functionceramide binding
XXX0098656biological_processmonoatomic anion transmembrane transport
XXX0110099biological_processnegative regulation of calcium import into the mitochondrion
XXX1901524biological_processregulation of mitophagy
XXX1905091biological_processpositive regulation of type 2 mitophagy
XXX1990542biological_processmitochondrial transmembrane transport
XXX2000378biological_processnegative regulation of reactive oxygen species metabolic process
Functional Information from PROSITE/UniProt
site_idPS00558
Number of Residues23
DetailsEUKARYOTIC_PORIN Eukaryotic mitochondrial porin signature. YqvDPdAcfsAKVNNssliGLgY
ChainResidueDetails
XXXTYR225-TYR247

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues163
DetailsTRANSMEM: Beta stranded => ECO:0000269|PubMed:18988731
ChainResidueDetails
XXXLEU26-THR33
XXXTRP149-GLU158
XXXTHR165-THR175
XXXPHE178-ASN185
XXXGLU189-VAL198
XXXLEU202-TRP210
XXXTHR217-GLN226
XXXALA231-ASN238
XXXLEU242-LEU251
XXXILE255-LEU263
XXXHIS273-ALA283
XXXLEU39-ASN48
XXXVAL54-TRP64
XXXLEU69-ASN76
XXXTHR80-GLU88
XXXLEU95-SER104
XXXLYS110-LYS119
XXXILE123-ASP132
XXXPRO136-GLY145

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:24908397, ECO:0007744|PDB:4C69
ChainResidueDetails
XXXGLU12
XXXLYS20

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXLEU242
XXXSER260

site_idSWS_FT_FI4
Number of Residues1
DetailsSITE: Involved in ceramide and phosphatidylcholine binding. Critical for channel structural stability and gating => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXGLU73

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9Z2L0
ChainResidueDetails
XXXSER13

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:21183079
ChainResidueDetails
XXXTHR19

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0007744|PubMed:23806337
ChainResidueDetails
XXXLYS20

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:18034455
ChainResidueDetails
XXXTYR67

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXTHR107

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:23576753
ChainResidueDetails
XXXLYS109

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: Phosphoserine; by NEK1 => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXSER193

site_idSWS_FT_FI12
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21183079
ChainResidueDetails
XXXSER240

site_idSWS_FT_FI13
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:23576753
ChainResidueDetails
XXXLYS252

site_idSWS_FT_FI14
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXLYS266

site_idSWS_FT_FI15
Number of Residues5
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32047033
ChainResidueDetails
XXXGLU12
XXXLYS53
XXXLYS110
XXXLYS274

site_idSWS_FT_FI16
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:32047033
ChainResidueDetails
XXXLYS20
XXXLYS109

site_idSWS_FT_FI17
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXLYS161

site_idSWS_FT_FI18
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P21796
ChainResidueDetails
XXXLYS266

227111

PDB entries from 2024-11-06

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